| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023382
Identifier: 124023382
GI number: 124023382
Start: 1468635
End: 1469846
Strand: Direct
Name: 124023382
Synonym: P9303_16801
Alternate gene names: NA
Gene position: 1468635-1469846 (Clockwise)
Preceding gene: 124023381
Following gene: 124023383
Centisome position: 54.75
GC content: 47.36
Gene sequence:
>1212_bases TTGAGCAAATGGCGCCTTGGAAAGTTGAAAGACGTTGATTCTTGGCCTTGGAAGTGGTGGCGCTGGGCTTCGTCCAAGTG GAGGCTGATTCCGCTCCTGGATCGATGGCTTTTAGGTGAGTTAATACCCGTATTGCTGTTTGCCATAGCGGCCTTCACGG TGGTTTCCGTCTCAGTGGGGGTGATGTTTGATTTGGTGCGCAAGATTGTTGAGTTTGGATTGCCTCTGCATTTTGCATTG CAGGTTTTTAGCTTGAAGTTACCTTTCTTTCTGGTGATTTCTTTTCCGATGGCCACCTTGTTGGCCACCTTGTTGGCTTA TAGCCGTCTTTCTTCTAACAGCGAATTCACGGCTTTGCGCAGCCTCGGTGTAAGCACCAGACGAATCGTTGCTCCAGCAT TGGCATTGGCATTATTGATGACAGGGCTAACTTTTATCTTCAATGATGTCATTGTTCCAAGAACAAATAGTAGTGCTGAG GTGACGATAAAGCGTGCTCTTGGCAAAGCAATTGCTACAGAGAAAGGCAAACATGTTGTTTATTCCCGATTCGGAACGAT TACTGGTACAAAAGCTGAAGATAGGAATCAAGGGCTTTCTCAGTTGTTTTATGCAAGGGAATTCCTTAAGGGAGAGATGG AGGATGTCACAGTGCTTGATTTGTCTCGTCTTGGTTTTACTCAGATGTTGAAGGCCGAGCGGGCTATTTGGAATGAGCAG GAGGCGATGTGGGAATTTTTTAACGGTAATATCCTTACTCTCACACCAAGTGGCAGTACCACTTCAGTTGAATTTGATCG CTATCTCTACCCCCTAACATCAGGTCCAATTCGTGTGGCCAAACTCCCTAAAGATGCCAACAACATGACTGTTGCACAGG CAATGGAGGCTGCAAGTATTTATACCGATGCTGGTAACCGTAAAGAGGCAAGGCGTTTGAAGGTGCGTATCCAAGAAAAA TTCACTTTCCCGATGTCCTGCCTGGTGTTTGGCCTGATTGGCAGCAGCCTTGGTGCAAAACCTAATTCTCGGACCAGCCG GACCCAGGGATTTGGCATCAGTCTCTTATTAATTCTTGCTTATTACACGCTTAGCTTCAGCTTCAGTTCTCTAGGCGTTA CGGGCACTTTGACACCGATGTTGGCAGCGTGGGTCCCTGTTTTTATCTCTTTGGCAGGTGGCGGTCTGTTGCTGCGTCAG GCCAGTCGTTGA
Upstream 100 bases:
>100_bases ACATTCTTACGGAAGGCAGCATTCTTGCTTCAGGCCGTTCTGAAGAAGTGGCAAACAACCCCTTGGTACGGCGTCACTAT CTCGGGGAGGGTTTTCAGCT
Downstream 100 bases:
>100_bases ACTGCAGCGGCAGAATAAGAGAGTTGTCGCAGGGTCCTGGTGTTTGGAGTGACGTTGGCTGAGCTTTCCGCCTCGCTTGG GGATCCTGTTTTGGCTCTTG
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFAL QVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAE VTIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EAMWEFFNGNILTLTPSGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEK FTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWVPVFISLAGGGLLLRQ ASR
Sequences:
>Translated_403_residues MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFAL QVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAE VTIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EAMWEFFNGNILTLTPSGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEK FTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWVPVFISLAGGGLLLRQ ASR >Mature_402_residues SKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQ VFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEV TIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQE AMWEFFNGNILTLTPSGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKF TFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWVPVFISLAGGGLLLRQA SR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44835; Mature: 44704
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVG CCCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFDLVRKIVEFGLPLHFALQVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALR HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEVTIKRALGKAIATEKGKHVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE YSRFGTITGTKAEDRNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCHH EAMWEFFNGNILTLTPSGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASI HHHHHHHCCCEEEECCCCCCCEEEHHHEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH YTDAGNRKEARRLKVRIQEKFTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH YYTLSFSFSSLGVTGTLTPMLAAWVPVFISLAGGGLLLRQASR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure SKWRLGKLKDVDSWPWKWWRWASSKWRLIPLLDRWLLGELIPVLLFAIAAFTVVSVSVG CCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMFDLVRKIVEFGLPLHFALQVFSLKLPFFLVISFPMATLLATLLAYSRLSSNSEFTALR HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SLGVSTRRIVAPALALALLMTGLTFIFNDVIVPRTNSSAEVTIKRALGKAIATEKGKHVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE YSRFGTITGTKAEDRNQGLSQLFYAREFLKGEMEDVTVLDLSRLGFTQMLKAERAIWNEQ EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCHH EAMWEFFNGNILTLTPSGSTTSVEFDRYLYPLTSGPIRVAKLPKDANNMTVAQAMEAASI HHHHHHHCCCEEEECCCCCCCEEEHHHEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH YTDAGNRKEARRLKVRIQEKFTFPMSCLVFGLIGSSLGAKPNSRTSRTQGFGISLLLILA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH YYTLSFSFSSLGVTGTLTPMLAAWVPVFISLAGGGLLLRQASR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA