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The map label for this gene is ccmC

Identifier: 124023383

GI number: 124023383

Start: 1469886

End: 1470842

Strand: Direct

Name: ccmC

Synonym: P9303_16811

Alternate gene names: 124023383

Gene position: 1469886-1470842 (Clockwise)

Preceding gene: 124023382

Following gene: 124023385

Centisome position: 54.79

GC content: 50.78

Gene sequence:

>957_bases
GTGTTTGGAGTGACGTTGGCTGAGCTTTCCGCCTCGCTTGGGGATCCTGTTTTGGCTCTTGGTTTGGCTGCATTTGCCCT
ACTTCTGTTGGCCATACCAATCTCTTTTTGGATGGTTTCAGGAGGTAGCAATTCTGCTGTTGTGACACTTCTGGTGGCTC
TTGCCAATTTGGTTCTTACCGCTCAATTGGTTTTGCGGTGGTGGCAGTCGGGTCACTTCCCGATCAGCAACCTTTATGAA
TCCCTCTGTTTCCTGGCCTGGGCTTGCACACTTGCGCAGCTATTGGTGGAACGTTCCTTGTCTTCCCCGATTGTTTCAGC
TGCTGCTACACCAATGGCTTTGCTTTGTGTGGCTTTTGCCAGCTTTGCATTACCAGAAACTCTTCAGGAGGCCTCTCCTC
TAGTACCGGCTCTTCGCTCCAGTTGGCTTGTGATGCACGTGAGCGTGATTATGTGTAGTTACGCTGCCCTGCTTGTTGGT
TCTTTCTTATCAATGGCGGTTCTATTTACTGATCGCCAGCAAACTTTGGAGCTACGCAGCAGTTCAATTGGAACAGGTGG
CTTTCGTCAGGCCAAGCTAGCCACATCTGCTATTGATCAGAATGATGGCCTGCGCCTGAGTTCAATCAACTTGAGCCGCA
CTGAACAGTTGGACAGCCTTAGTTATCGCACGATTACGGTTGGCTTTTTGTTGCTCACGCTTGGCTTGATCAGTGGTGCA
GTTTGGGCCAATGAGGCCTGGGGGAGCTGGTGGAGTTGGGATCCAAAGGAAACCTGGGCTCTAATTTGTTGGATGGTTTA
CGCGGCCTATCTGCATACACGTTTCAGCCGTGGCTGGAGCGGGCGACGTCCGGCTTTAGTTGCAGTGGCAGGCATCGTTG
TGATCGTTGTTTGTTATATAGGTGTGAATCTGTTAGGGATTGGTTTGCACAGCTACGGCTGGTTCTTTGAAGCCTAA

Upstream 100 bases:

>100_bases
GGTCCCTGTTTTTATCTCTTTGGCAGGTGGCGGTCTGTTGCTGCGTCAGGCCAGTCGTTGAACTGCAGCGGCAGAATAAG
AGAGTTGTCGCAGGGTCCTG

Downstream 100 bases:

>100_bases
TCTTCTGATGTTGATCTGTTCTTTTTAACAACAAATCCCCACAAGACTAATAGGCAAAAGATGCAGTTATTACTGCATCT
TTTGCTTCAGACCAGAACAC

Product: heme transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSAIDQNDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA

Sequences:

>Translated_318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSAIDQNDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA
>Mature_318_residues
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLTAQLVLRWWQSGHFPISNLYE
SLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFASFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVG
SFLSMAVLFTDRQQTLELRSSSIGTGGFRQAKLATSAIDQNDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYIGVNLLGIGLHSYGWFFEA

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCSA_PROM3 (A2CAB5)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001017690.1
- STRING:   A2CAB5
- GeneID:   4778926
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_16811
- eggNOG:   COG0755
- HOGENOM:   HBG733666
- OMA:   YNLPALV
- ProtClustDB:   CLSK919431
- HAMAP:   MF_01391
- InterPro:   IPR002541
- InterPro:   IPR003557
- InterPro:   IPR017562
- PRINTS:   PR01386
- TIGRFAMs:   TIGR03144

Pfam domain/function: PF01578 Cytochrom_C_asm

EC number: NA

Molecular weight: Translated: 34370; Mature: 34370

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13c22b2c)-; HASH(0x15a8fb20)-; HASH(0x167304c8)-; HASH(0x15045f84)-; HASH(0x146a13fc)-; HASH(0x165677e4)-; HASH(0x15b27e88)-; HASH(0x16b9fcf8)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLT
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
AQLVLRWWQSGHFPISNLYESLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVGSFLSMAVLFTDRQQTLELRS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SSIGTGGFRQAKLATSAIDQNDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYI
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GVNLLGIGLHSYGWFFEA
HHHHHHHHHHHCCCEECH
>Mature Secondary Structure
MFGVTLAELSASLGDPVLALGLAAFALLLLAIPISFWMVSGGSNSAVVTLLVALANLVLT
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
AQLVLRWWQSGHFPISNLYESLCFLAWACTLAQLLVERSLSSPIVSAAATPMALLCVAFA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFALPETLQEASPLVPALRSSWLVMHVSVIMCSYAALLVGSFLSMAVLFTDRQQTLELRS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SSIGTGGFRQAKLATSAIDQNDGLRLSSINLSRTEQLDSLSYRTITVGFLLLTLGLISGA
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWANEAWGSWWSWDPKETWALICWMVYAAYLHTRFSRGWSGRRPALVAVAGIVVIVVCYI
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GVNLLGIGLHSYGWFFEA
HHHHHHHHHHHCCCEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA