| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is yueF [H]
Identifier: 124023341
GI number: 124023341
Start: 1431872
End: 1432954
Strand: Direct
Name: yueF [H]
Synonym: P9303_16391
Alternate gene names: 124023341
Gene position: 1431872-1432954 (Clockwise)
Preceding gene: 124023340
Following gene: 124023342
Centisome position: 53.37
GC content: 53.83
Gene sequence:
>1083_bases GTGAAATTCTCCCAATGGCTTGCTCTGGCTGCACTGATGGCTGCGGGTGTGCTGTTTTGGAGCCTTAGAGAGGTGCTGAT CCACCTCTTTGCAGGCGTTGTTCTTGCCATGGCTCTCTGCACTCTGGTGGGTGAGCTGCGCTCAAGGAAACCCATGCCTC GCAGCATGGCCCTCCTGATCTGCTTAGTCGCGCTTGTGCTTGTTGTGAGTATGGCGACCGCCATTGTGGTACCCCCCTTT ACAGAGCAATTCCACCAATTGCTTTTACAACTACCTTCAGCAGCTAAGGAACTCTGGAAGCTGGCTATCGGCGCCATCAA CCAAACCTCTGCAATGGTCTACGGAGTTAACAACAGCAAGGGTGGCTGGGAAGAACAGCTGTTTGCAAATGGGTTAAACG CATTACCAGATGGTGCAAGCTTGGCCTCAGGAGTGAGGGAAGGCCTGCAAGGCCTTCTGGGCCTTGCAGGCAACCTCGGC AGCGGCTTGGTGCAACTCCTGTTTGTGTTGGCGATGAGCTTGATGGTGGCGGTGCAACCGACGGCATACAGAGATGTAGC CATCTCGTTATTGCCTTCGTTTTATAGGCGACGAGCCCGCTCGATCCTTAGCCAATGCGGAGATGCGCTGAGCAGCTGGA TGGTGGGTGTACTGATCAGTTCCTTTTGCGTGGCCCTGCTTGCAGCAATCGGCCTTTCACTACTTGGGATCAAGCTGGTG ATGGCGAATGCCTTGCTTGCTGGGATGCTCAACGTGATCCCAAATGTGGGGCCTACCTTGAGCACGATCTTTCCGATGTC GGTAGCGCTACTTGATGCACCCTGGAAAGCAGTCGCTGTGCTTGGGCTGTATGTGGTGATTCAGAACCTGGAAAGTTATG TGATCACTCCATCAGTGATGCATCACCAAGTGAAATTGTTGCCTGGGCTGACTCTCACAGCCCAGTTTGTATTCACAGTT GTGTTTGGTCCTCTCGGCCTGCTGTTGGCGCTGCCACTCGCTGTAGTGCTGCAAGTGTTGATTCGCGAGGTGGTCATCCA CGATTTGCTTGATCCCTGGAAGAAAAAGCGATTGGCGCCATGA
Upstream 100 bases:
>100_bases TGAACGCTTCATGCGTTTTGCCAAACGCTATGCAGCTTGCAACGGTCTGGGCTACTCCCAAAACTAAGGCGAGAATGCAA AGGCTGCCGCCTGAAGACGG
Downstream 100 bases:
>100_bases ATGCCCGCACCCTTCTTGTCGCACTCACGCTGGTGGTGCTGGCTTTGCTCACCTGGCAGTTGCGTTGGGTGTTGTTAGTG CTGTTTGGAGCAGTGGTATT
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKFSQWLALAALMAAGVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLICLVALVLVVSMATAIVVPPF TEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSKGGWEEQLFANGLNALPDGASLASGVREGLQGLLGLAGNLG SGLVQLLFVLAMSLMVAVQPTAYRDVAISLLPSFYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLV MANALLAGMLNVIPNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVMHHQVKLLPGLTLTAQFVFTV VFGPLGLLLALPLAVVLQVLIREVVIHDLLDPWKKKRLAP
Sequences:
>Translated_360_residues MKFSQWLALAALMAAGVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLICLVALVLVVSMATAIVVPPF TEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSKGGWEEQLFANGLNALPDGASLASGVREGLQGLLGLAGNLG SGLVQLLFVLAMSLMVAVQPTAYRDVAISLLPSFYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLV MANALLAGMLNVIPNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVMHHQVKLLPGLTLTAQFVFTV VFGPLGLLLALPLAVVLQVLIREVVIHDLLDPWKKKRLAP >Mature_360_residues MKFSQWLALAALMAAGVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLICLVALVLVVSMATAIVVPPF TEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSKGGWEEQLFANGLNALPDGASLASGVREGLQGLLGLAGNLG SGLVQLLFVLAMSLMVAVQPTAYRDVAISLLPSFYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLV MANALLAGMLNVIPNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVMHHQVKLLPGLTLTAQFVFTV VFGPLGLLLALPLAVVLQVLIREVVIHDLLDPWKKKRLAP
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 38473; Mature: 38473
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSQWLALAALMAAGVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH CLVALVLVVSMATAIVVPPFTEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCC GGWEEQLFANGLNALPDGASLASGVREGLQGLLGLAGNLGSGLVQLLFVLAMSLMVAVQP CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC TAYRDVAISLLPSFYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MANALLAGMLNVIPNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVM HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH HHQVKLLPGLTLTAQFVFTVVFGPLGLLLALPLAVVLQVLIREVVIHDLLDPWKKKRLAP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC >Mature Secondary Structure MKFSQWLALAALMAAGVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH CLVALVLVVSMATAIVVPPFTEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCC GGWEEQLFANGLNALPDGASLASGVREGLQGLLGLAGNLGSGLVQLLFVLAMSLMVAVQP CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC TAYRDVAISLLPSFYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MANALLAGMLNVIPNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVM HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH HHQVKLLPGLTLTAQFVFTVVFGPLGLLLALPLAVVLQVLIREVVIHDLLDPWKKKRLAP HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]