| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yrrI [H]
Identifier: 124023342
GI number: 124023342
Start: 1432951
End: 1433952
Strand: Direct
Name: yrrI [H]
Synonym: P9303_16401
Alternate gene names: 124023342
Gene position: 1432951-1433952 (Clockwise)
Preceding gene: 124023341
Following gene: 124023345
Centisome position: 53.42
GC content: 54.99
Gene sequence:
>1002_bases ATGAATGCCCGCACCCTTCTTGTCGCACTCACGCTGGTGGTGCTGGCTTTGCTCACCTGGCAGTTGCGTTGGGTGTTGTT AGTGCTGTTTGGAGCAGTGGTATTAGCAGTAGCACTTGATGTCCTAATTGAAAAACTTCAGGACCGCCTCTCCTGGCCTC GTCCCCTTTCGCTAGCAGTTGTGCTGGTGGTGCTGCTGCTTGGCGGTGCCTTGGTTTTCCAGCTGCTGGTGCCTGAGTTG ATCACCCAGGTTCAAGAGTTGGGCAACCTCGTTCCCACCCTGGTGACCAAGCTGAAATCGATGCTGGTCAGCAACCCGCG ACTGATGAATCTGGAAGAGTCTTTTACCGAACAGTTCAGCTGGGATCGGATCCAACCCTTGGGCTCTCAATTGATTGGTG TTGCAGGCGGAGCCGCCAACAGCCTGATTCAGTTGTTGTTGATGAGCCTGCTGGCTGTCTTGCTAGCGCTAGATCCTGCA TCCCATCGCCAAATGGTGATTGCTGCAACACCTCGACCTGCGCGACAGGAGATGGCTGAATTGCTTGATCAATGCCGTTT GGCTCTTGGTGGCTGGCTGGCTGGGATGACGATCTCAGCCAGCAGCGTGTTTGTGCTCACTTGGGCAGGGCTTGCACTGC TCAAGGTTCCTCTGGCCCTATTGAGTGCATTGGTCTGTGGCTTGCTGACCTTCGTCCCCACCATTGGGCCAACGGCCGCC TCCCTGCTGCCATTGGCCATGGCCCTGCTTGTTTCACCCCTACTAATGCTGCAAGTGCTGGTGTTGCGGCTGATTTTGCA GAATCTTGAAGCGTTTTTGCTCACCCCGCTGTTATTGCGGCGTACGGTCAACCTGCTTCCCACCGTGGCATTAATGGCTC AACTGAGCTTGGGCGCCTTATTGGGTCTACCAGGGGTGTTGTTGGCTCTGCCACTTGTGGTGGTTTTGCAGGTAGGAATG GAGCAGGTGGTTGTTAAACAGATCATGGATCGTTGGGCATAA
Upstream 100 bases:
>100_bases TGCTGTTGGCGCTGCCACTCGCTGTAGTGCTGCAAGTGTTGATTCGCGAGGTGGTCATCCACGATTTGCTTGATCCCTGG AAGAAAAAGCGATTGGCGCC
Downstream 100 bases:
>100_bases TCATCCATCGATTTTCGTTTGATATTAGGCTGTGATTTATTGATGAATAGCATCACAGAAATCACGATTTAGCTTTGAGA CTTGTCGATTTCATTTCTAT
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVTKLKSMLVSNPRLMNLEESFTEQFSWDRIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPA SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA
Sequences:
>Translated_333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVTKLKSMLVSNPRLMNLEESFTEQFSWDRIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPA SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA >Mature_333_residues MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPEL ITQVQELGNLVPTLVTKLKSMLVSNPRLMNLEESFTEQFSWDRIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPA SHRQMVIAATPRPARQEMAELLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA SLLPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLGLPGVLLALPLVVVLQVGM EQVVVKQIMDRWA
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 35827; Mature: 35827
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLVVLLLGGALVFQLLVPELITQVQELGNLVPTLVTKLKSMLVSNPRLMNLEESFTEQFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC WDRIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPASHRQMVIAATPRPARQEMAE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH LLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SLLPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLPGVLLALPLVVVLQVGMEQVVVKQIMDRWA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNARTLLVALTLVVLALLTWQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLVVLLLGGALVFQLLVPELITQVQELGNLVPTLVTKLKSMLVSNPRLMNLEESFTEQFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC WDRIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPASHRQMVIAATPRPARQEMAE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH LLDQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SLLPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLPGVLLALPLVVVLQVGMEQVVVKQIMDRWA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]