| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023275
Identifier: 124023275
GI number: 124023275
Start: 1375598
End: 1376773
Strand: Reverse
Name: 124023275
Synonym: P9303_15731
Alternate gene names: NA
Gene position: 1376773-1375598 (Counterclockwise)
Preceding gene: 124023276
Following gene: 124023274
Centisome position: 51.32
GC content: 38.27
Gene sequence:
>1176_bases GTGAAACTGATAACAATTCAAAAAATGATAACTCAAATGAACGAGGTTGGAACAAGCATGTCCAATGAAAATACGTACAC AAATAATAGGAATTTTAATCTAACGGGTAGATTGGCATGGAAGATATTTGATCCAACCCGTCAACCCAATATCAACTGGG CATCTGAAAGCTATAAAAGTTACAATCTTCTCTTTGAAACTGGAGCAAGAACTCTAATATTAGAATTGCAGAGCACATAC TTTGAACTTCAAGCCCTTAAAGACATTGTTCGACAGTACATAGAACTATATAAGACAAATAAATCGTCCATGAAAATCGT GCTGGATCAATATGTTATTGAGTACGCATCACTACTTGACCTCCAACAATCAAAAACTCAAACATTGAATCAATTGTCAA TGTTGCTGGAATATTACAACAGATATATTACTAAAGCTGCAAACCTTGCTGAAAAGATAAATCTAGATCATATATCAATG ATAGTACCTGAGGAGCCTTTGGAATTAACAGGTGAATGGAATTTGCCAGTTGATGAAACTGTGCAGAAAGGAAAGTCAGA GCGCGAAGAGATTCAAAATGCTATCGCATTGTCTGAGAAAAAAAAGTGGGAGGGCTTAAGTCTATTAGGTAACTATATTC CTTCATTAGGATTGGTTGGAACGATTTCTACATCGAATTCTGAGGGCTACACTGAGGCACCTTCACAGGCTGGTAAGCAA AATCACTGGAACTCAGTAAATCGATGGAATTCAAGTGTGATGGTTAATATGACATGGCAATTTGATGGAGGAGTGGCTGC TGCAAATGCTCAGTCATATTTTAAACAATCTGAAAGATCTCGTGATGATGCCAGACAAAAAGAATTTGTGGTTGCCTCGC AAATTATAAGTAGCTACGGACAATATGAACTAGCAAAGATTGAGGTTGAATCAGCGAGGCAGGGCCTGGAAAGTGCAATG ATTGCTGAAAAGGTGGCCAGAGAACGTTACTCAATCGGTATAACAGACTATTCGACAGTTGTTCTAACCACTACAACTTT GGCAAAGTCAGGTATTAATTTTTCTAATTCAATTTCTAAGTATAATACTGCTGTAGCGCAGCTGTACAGATACTCTGCAA CATGGCCAGAGGGTACCCAAGAGCTGCTTACGAAGCTGATGGAGGAACTAAAGTGA
Upstream 100 bases:
>100_bases AGCTTAGATACATTAGATTACAACACAAAGATTGGGAATTCTAATCAACAATCTTATACATATAAGACAATAAAGAGTGA TGAGAATATTAGCTTAACAG
Downstream 100 bases:
>100_bases GCTCTATTTTTACTGATAAAGCATTAAAATCAAAGCGGCGAAGTTCAGATTTAACAACTCCAACTGAAATACTGTCATCG CCACTAAAAACGACAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: RND Family Outer Membrane Efflux Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK
Sequences:
>Translated_391_residues MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK >Mature_391_residues MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44492; Mature: 44492
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKS CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHCHHH YNLLFETGARTLILELQSTYFELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLD HEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISMIVPEEPLELTGEWNLPVDET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH VQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHCCCC NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYG CCCCCHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC QYELAKIEVESARQGLESAMIAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISK CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHCCCCCHHHHHH YNTAVAQLYRYSATWPEGTQELLTKLMEELK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKS CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHCHHH YNLLFETGARTLILELQSTYFELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLD HEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISMIVPEEPLELTGEWNLPVDET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH VQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHCCCC NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYG CCCCCHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC QYELAKIEVESARQGLESAMIAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISK CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHCCCCCHHHHHH YNTAVAQLYRYSATWPEGTQELLTKLMEELK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA