| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023274
Identifier: 124023274
GI number: 124023274
Start: 1374192
End: 1375235
Strand: Reverse
Name: 124023274
Synonym: P9303_15721
Alternate gene names: NA
Gene position: 1375235-1374192 (Counterclockwise)
Preceding gene: 124023275
Following gene: 124023273
Centisome position: 51.26
GC content: 36.59
Gene sequence:
>1044_bases ATGTCTACAGTCTGTGTTACACAGAATGTTAATTGCAGACAAAAAAGAATAACGGTTGAGCCTCCAAAAGATATTGTTTT CAAGAAAGGAACTCTATTGTCTTGGATTCAGTCTGTTTCCCAGCGCGAAAAACTACAACAAAGTATTCTAAATTTAACAA ACATCCAGGAGAACAGTAGAGATGAGTTAGATAATCTCAAAAAGAAGCTTAAAATAGTAAATTCTGAATTAAAAAGAAGG ATAGAGTATCTGGAAAGAATGAAAATACTGGCCTCAAGAGGGTCAATTAATAGAGCGCAGATCTTGACTGAGGAAACCAA TGTATATAACCTTCAATCAACTGTCTTAACCCTTAATGATAGCCAGACGTCATTGAATTTAAAAATTAATCAAGCTACTG ATAGTTTACGTAAAACCCTTGGTGAAACAATATCAAAAACCATGATCTTTGCAAGACAGGATTTATACATTGTTGATGTA GTTCCTTCTTCAGATGATTATGTTAAGTCTGGTGAATCAATTTTTCTTCTCGCTTCAGAAGCTATTACTGCACCAGATCT AGTTCCAATATTCTTAACTAATAAGGATGCATCTCAGGTTTTTTCTGGCATGAAAGGTATAGCAACGCCCGAAGGATACC AAAGTGCTCAGGTTGGAGGTATAGAGCTTAATGTTATATCGGTTCAAAATCTTGCATCTGGGGTTGATGAAATAGTACAT AAGATAGGAGATCAAGCTGAGGCTAATTATATTGTAGGAAAGTATCAGACTCCCATTACTGGTGTTGTTAAGCTAATCAA GCCTGTCAATAAGAAATACTTGAAGCCTAATAGCGGAGGATACCAATGGACCTCCCAGAGTGAACTCCCTTTTCCTCCCA AAATAGGCGACAGGCTGACTATTAGAATTACAACTAGAAAAGTTACTCCCTTAACATTGGCAGTTCCGGCAATCAAGAAA TTCTTTGGATTAGCATCTCCTGATGAACAACAAAAAACTGTTAGTCAGAGAAATAACTTGCCATACAATCGGGGTACCTG TTAA
Upstream 100 bases:
>100_bases TGACTGGAGAGATGATGCTTTTACATTCTATACCCGGCCGGAAGAGTTTGATAGAGATGATGTCATTAGAACAGCGAAGA ATATTCTTCAATCCTATGAT
Downstream 100 bases:
>100_bases TGCGCAGAGAGTTATCTCGGAGTTTAAAATATGTTCGAACTGTCCTTCAATATGAGTCGGCTGAATGCGGGGCTGCAAGT TTAGCTACTGTTCTAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSTVCVTQNVNCRQKRITVEPPKDIVFKKGTLLSWIQSVSQREKLQQSILNLTNIQENSRDELDNLKKKLKIVNSELKRR IEYLERMKILASRGSINRAQILTEETNVYNLQSTVLTLNDSQTSLNLKINQATDSLRKTLGETISKTMIFARQDLYIVDV VPSSDDYVKSGESIFLLASEAITAPDLVPIFLTNKDASQVFSGMKGIATPEGYQSAQVGGIELNVISVQNLASGVDEIVH KIGDQAEANYIVGKYQTPITGVVKLIKPVNKKYLKPNSGGYQWTSQSELPFPPKIGDRLTIRITTRKVTPLTLAVPAIKK FFGLASPDEQQKTVSQRNNLPYNRGTC
Sequences:
>Translated_347_residues MSTVCVTQNVNCRQKRITVEPPKDIVFKKGTLLSWIQSVSQREKLQQSILNLTNIQENSRDELDNLKKKLKIVNSELKRR IEYLERMKILASRGSINRAQILTEETNVYNLQSTVLTLNDSQTSLNLKINQATDSLRKTLGETISKTMIFARQDLYIVDV VPSSDDYVKSGESIFLLASEAITAPDLVPIFLTNKDASQVFSGMKGIATPEGYQSAQVGGIELNVISVQNLASGVDEIVH KIGDQAEANYIVGKYQTPITGVVKLIKPVNKKYLKPNSGGYQWTSQSELPFPPKIGDRLTIRITTRKVTPLTLAVPAIKK FFGLASPDEQQKTVSQRNNLPYNRGTC >Mature_346_residues STVCVTQNVNCRQKRITVEPPKDIVFKKGTLLSWIQSVSQREKLQQSILNLTNIQENSRDELDNLKKKLKIVNSELKRRI EYLERMKILASRGSINRAQILTEETNVYNLQSTVLTLNDSQTSLNLKINQATDSLRKTLGETISKTMIFARQDLYIVDVV PSSDDYVKSGESIFLLASEAITAPDLVPIFLTNKDASQVFSGMKGIATPEGYQSAQVGGIELNVISVQNLASGVDEIVHK IGDQAEANYIVGKYQTPITGVVKLIKPVNKKYLKPNSGGYQWTSQSELPFPPKIGDRLTIRITTRKVTPLTLAVPAIKKF FGLASPDEQQKTVSQRNNLPYNRGTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38674; Mature: 38543
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVCVTQNVNCRQKRITVEPPKDIVFKKGTLLSWIQSVSQREKLQQSILNLTNIQENSR CCCEEEECCCCCCCCEEECCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DELDNLKKKLKIVNSELKRRIEYLERMKILASRGSINRAQILTEETNVYNLQSTVLTLND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEEEEEEEC SQTSLNLKINQATDSLRKTLGETISKTMIFARQDLYIVDVVPSSDDYVKSGESIFLLASE CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCHHHHCCCEEEEEECC AITAPDLVPIFLTNKDASQVFSGMKGIATPEGYQSAQVGGIELNVISVQNLASGVDEIVH CCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHH KIGDQAEANYIVGKYQTPITGVVKLIKPVNKKYLKPNSGGYQWTSQSELPFPPKIGDRLT HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEE IRITTRKVTPLTLAVPAIKKFFGLASPDEQQKTVSQRNNLPYNRGTC EEEEEEECCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STVCVTQNVNCRQKRITVEPPKDIVFKKGTLLSWIQSVSQREKLQQSILNLTNIQENSR CCEEEECCCCCCCCEEECCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DELDNLKKKLKIVNSELKRRIEYLERMKILASRGSINRAQILTEETNVYNLQSTVLTLND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCEEEEEEEEEEEEC SQTSLNLKINQATDSLRKTLGETISKTMIFARQDLYIVDVVPSSDDYVKSGESIFLLASE CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCHHHHCCCEEEEEECC AITAPDLVPIFLTNKDASQVFSGMKGIATPEGYQSAQVGGIELNVISVQNLASGVDEIVH CCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHH KIGDQAEANYIVGKYQTPITGVVKLIKPVNKKYLKPNSGGYQWTSQSELPFPPKIGDRLT HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEE IRITTRKVTPLTLAVPAIKKFFGLASPDEQQKTVSQRNNLPYNRGTC EEEEEEECCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA