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The map label for this gene is 124023241

Identifier: 124023241

GI number: 124023241

Start: 1342545

End: 1343078

Strand: Direct

Name: 124023241

Synonym: P9303_15391

Alternate gene names: NA

Gene position: 1342545-1343078 (Clockwise)

Preceding gene: 124023240

Following gene: 124023242

Centisome position: 50.05

GC content: 49.44

Gene sequence:

>534_bases
ATGGCCACCGATTCCCCAGCTCAAGAGAGGGATGAGGTCTCTAGCTTCTCCTTACCAGCACGTTTAGAGGCCATTCTTTA
TTTGAAGGGTCGCCCTGTAACGCTCAAAGAGATGGCAGAGCTAGCCAATGAGACTGAGGATCTGATTGAGCAAGCTCTAC
TTGCGCTGATGGCAGGCTATGCACAGAGAGATACAGCCTTAGAGATCCAAGAGAACAATGGTCGATATAGCCTTCAATTG
TGTCCAGGCCTTGGCGAGCTGGTCCACCATCTTTTACCCGTTGATCTTTCCATAGCAACACTCAGAACCCTTGCCACCAT
TGCCCTGAAAAAAAGAATTCTTCAATCGGAGCTGGTCGATTTACGGGGATCAGGCGCCTACGACCACATCAAAGAACTCG
TTGCTCAGAACTTCATCGAACGCAAACGACAGAGCGAGGGCAGGTCTTATTGGCTCACGCTCTCTGAAAAGTTCCATCGA
ACCTTCTCAGTACTTCCTGATTTAGGTACAGCCGAACCTTCTCAGGTTGCATAG

Upstream 100 bases:

>100_bases
CCAAACTGGGAAGAAACCAACAACCCCGCCTACTGCTTATTTCTGGGTGCACAGACCGTTTGATCGCGGTAACTTGGCAT
ATTCCATAGCAGGGCCTGCC

Downstream 100 bases:

>100_bases
AGTTCTCAGAATAGTTGTCTTCACCCATGCAAATCCTGGCCACGTTGCTACAGGTGCTAGCCCAGACACTTGAGATCTAC
TCACTGGTGCTTATCGTGCG

Product: transcription regulator

Products: NA

Alternate protein names: Segregation And Condensation Protein B; Condensin Subunit ScpB; Transcriptional Regulator; Transcription Regulator; YpuH-Like Family Transcriptional Regulator; Chromosome Segregation/Condensation Protein B; Transcription Regulator YpuH-Like Family; Transcriptional Regulator Containing HTH Domain

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MATDSPAQERDEVSSFSLPARLEAILYLKGRPVTLKEMAELANETEDLIEQALLALMAGYAQRDTALEIQENNGRYSLQL
CPGLGELVHHLLPVDLSIATLRTLATIALKKRILQSELVDLRGSGAYDHIKELVAQNFIERKRQSEGRSYWLTLSEKFHR
TFSVLPDLGTAEPSQVA

Sequences:

>Translated_177_residues
MATDSPAQERDEVSSFSLPARLEAILYLKGRPVTLKEMAELANETEDLIEQALLALMAGYAQRDTALEIQENNGRYSLQL
CPGLGELVHHLLPVDLSIATLRTLATIALKKRILQSELVDLRGSGAYDHIKELVAQNFIERKRQSEGRSYWLTLSEKFHR
TFSVLPDLGTAEPSQVA
>Mature_176_residues
ATDSPAQERDEVSSFSLPARLEAILYLKGRPVTLKEMAELANETEDLIEQALLALMAGYAQRDTALEIQENNGRYSLQLC
PGLGELVHHLLPVDLSIATLRTLATIALKKRILQSELVDLRGSGAYDHIKELVAQNFIERKRQSEGRSYWLTLSEKFHRT
FSVLPDLGTAEPSQVA

Specific function: Unknown

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19747; Mature: 19616

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDSPAQERDEVSSFSLPARLEAILYLKGRPVTLKEMAELANETEDLIEQALLALMAGY
CCCCCCCHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRDTALEIQENNGRYSLQLCPGLGELVHHLLPVDLSIATLRTLATIALKKRILQSELVD
HCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRGSGAYDHIKELVAQNFIERKRQSEGRSYWLTLSEKFHRTFSVLPDLGTAEPSQVA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ATDSPAQERDEVSSFSLPARLEAILYLKGRPVTLKEMAELANETEDLIEQALLALMAGY
CCCCCCHHHHHHHHCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRDTALEIQENNGRYSLQLCPGLGELVHHLLPVDLSIATLRTLATIALKKRILQSELVD
HCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRGSGAYDHIKELVAQNFIERKRQSEGRSYWLTLSEKFHRTFSVLPDLGTAEPSQVA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA