| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is ilvA [H]
Identifier: 124023240
GI number: 124023240
Start: 1340963
End: 1342507
Strand: Direct
Name: ilvA [H]
Synonym: P9303_15381
Alternate gene names: 124023240
Gene position: 1340963-1342507 (Clockwise)
Preceding gene: 124023237
Following gene: 124023241
Centisome position: 49.99
GC content: 52.1
Gene sequence:
>1545_bases ATGGACGATTATCTACAGAGGATTCTGAGGGCACGTGTCTATGACGTAGCCCATGAAACCCCCCTGGAACTGGCAAAAAA CCTCAGTCGCCGTCTTCAGAACAAGATCTGGTTGAAACGTGAGGACCTACAGCCAGTCTTCTCCTTCAAGCTTCGTGGTG CGTATAACCGCATGTCCCTTCTCAGTAAAGAGGAGTTGCAGCGTGGCGTGATTGCTTCAAGTGCTGGAAACCACGCTCAG GGAGTGGCACTGAGCGCCTCTTATCTCAATTGCAGAGCTGTGATTGTGATGCCGATCACCACACCCGAAATGAAAGTACG CGCAGTCCGTGCTCTTGGCGCTGAAGTCGCACTTCATGGAGAGACCTACGACGAGGCCTATCAAGAGGCCATGCGTCGAA GCGAAAAAGATGGACTCACATTTATCCACCCGTTTGATGATCCAGAGGTGATTGCTGGGCAAGGGACGATTGCTCTAGAA ATCCTGCGCCAGATCCAAGATCCACCAGATGCAATCTATGTCGCAGTTGGCGGTGGCGGACTGATCGGCGGGATTGCCAC TTATGTCAAAAGCTTGTGGCCGCAAGTCGAAATTATTGGTGTCGAGCCCCACGACGCTGCAGCAATGACGCTCTCTCTTG AAGCTGGTGAACGCATTCAGCTGCCAAAAGTAGGTCTATTTGCCGACGGAGTCGCTGTACGTCAAGTAGGCAAACACACC TTCTCATTAGCTCAGATGCACGTAGACGCGATGGTGACGGTAAGCACTGATGAAATCTGTGCAGCGATCAAAGATGTTTT TGAAGATACCCGCTCAATTCTTGAACCAGCTGGCGCACTGGCAATTGCTGGCATGAAGGCAGATATCGCCAAACGTGATC TTCAAGACCGCACTCTTGTGGCCGTGGCCTGTGGCGCAAACATGAACTTTGAACGGCTCCGTTTTGTCGCCGAAAGAGCA GAGCTAGGGGAAGAAAGGGAAGCAATACTCGCGGTAGAGATCCCAGAGCAGGCAGGCAGCCTGCGAAAGCTCTGCAACGT CCTAGCGGGAAAAAATCTCACCGAATTCAGTTACCGAATGGCAGAGGGGGATAGAGCCCAAATATTCATCGGGGTGCAGG TTTTAGACCTCAATGATCGAACCAAACTTTTAACGCGACTGCAGTCGTCAGGATTCCCATGCCTTGATCTCAGCAACGAC GAGCTGACCAAAGGGCACCTTCGTCACATGGTGGGTGGCCGGCTTCCTGCCTCAGCAAAAACCCTTTGCCGAGATGGATG TCGCGAACTGCTCTATCGCTTTGAGTTCCCTGAGCGCCCAGGAGCTCTTATGACCTTTGTTAGTGCCCTTCACCCCGAAT GGAGTATCAGCATCTTCCACTACCGCAATCACGGAGCAGATGTCGGCAGGATCGTTGTAGGTGTGTTGGTCCAGGACAAC GAAATGAAAAATTGGCAGCGCTTTCTTGATGATCTGGGCTATCCAAACTGGGAAGAAACCAACAACCCCGCCTACTGCTT ATTTCTGGGTGCACAGACCGTTTGA
Upstream 100 bases:
>100_bases TCCAACCCATTCAATCTAGGTCTTCTCAGCTATAGAACGGCGAAAGCAACCCTGGCAAGTGCAAACAGTTGCCGGATCTG AATATTGCAAGACTGGCGTG
Downstream 100 bases:
>100_bases TCGCGGTAACTTGGCATATTCCATAGCAGGGCCTGCCATGGCCACCGATTCCCCAGCTCAAGAGAGGGATGAGGTCTCTA GCTTCTCCTTACCAGCACGT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MDDYLQRILRARVYDVAHETPLELAKNLSRRLQNKIWLKREDLQPVFSFKLRGAYNRMSLLSKEELQRGVIASSAGNHAQ GVALSASYLNCRAVIVMPITTPEMKVRAVRALGAEVALHGETYDEAYQEAMRRSEKDGLTFIHPFDDPEVIAGQGTIALE ILRQIQDPPDAIYVAVGGGGLIGGIATYVKSLWPQVEIIGVEPHDAAAMTLSLEAGERIQLPKVGLFADGVAVRQVGKHT FSLAQMHVDAMVTVSTDEICAAIKDVFEDTRSILEPAGALAIAGMKADIAKRDLQDRTLVAVACGANMNFERLRFVAERA ELGEEREAILAVEIPEQAGSLRKLCNVLAGKNLTEFSYRMAEGDRAQIFIGVQVLDLNDRTKLLTRLQSSGFPCLDLSND ELTKGHLRHMVGGRLPASAKTLCRDGCRELLYRFEFPERPGALMTFVSALHPEWSISIFHYRNHGADVGRIVVGVLVQDN EMKNWQRFLDDLGYPNWEETNNPAYCLFLGAQTV
Sequences:
>Translated_514_residues MDDYLQRILRARVYDVAHETPLELAKNLSRRLQNKIWLKREDLQPVFSFKLRGAYNRMSLLSKEELQRGVIASSAGNHAQ GVALSASYLNCRAVIVMPITTPEMKVRAVRALGAEVALHGETYDEAYQEAMRRSEKDGLTFIHPFDDPEVIAGQGTIALE ILRQIQDPPDAIYVAVGGGGLIGGIATYVKSLWPQVEIIGVEPHDAAAMTLSLEAGERIQLPKVGLFADGVAVRQVGKHT FSLAQMHVDAMVTVSTDEICAAIKDVFEDTRSILEPAGALAIAGMKADIAKRDLQDRTLVAVACGANMNFERLRFVAERA ELGEEREAILAVEIPEQAGSLRKLCNVLAGKNLTEFSYRMAEGDRAQIFIGVQVLDLNDRTKLLTRLQSSGFPCLDLSND ELTKGHLRHMVGGRLPASAKTLCRDGCRELLYRFEFPERPGALMTFVSALHPEWSISIFHYRNHGADVGRIVVGVLVQDN EMKNWQRFLDDLGYPNWEETNNPAYCLFLGAQTV >Mature_514_residues MDDYLQRILRARVYDVAHETPLELAKNLSRRLQNKIWLKREDLQPVFSFKLRGAYNRMSLLSKEELQRGVIASSAGNHAQ GVALSASYLNCRAVIVMPITTPEMKVRAVRALGAEVALHGETYDEAYQEAMRRSEKDGLTFIHPFDDPEVIAGQGTIALE ILRQIQDPPDAIYVAVGGGGLIGGIATYVKSLWPQVEIIGVEPHDAAAMTLSLEAGERIQLPKVGLFADGVAVRQVGKHT FSLAQMHVDAMVTVSTDEICAAIKDVFEDTRSILEPAGALAIAGMKADIAKRDLQDRTLVAVACGANMNFERLRFVAERA ELGEEREAILAVEIPEQAGSLRKLCNVLAGKNLTEFSYRMAEGDRAQIFIGVQVLDLNDRTKLLTRLQSSGFPCLDLSND ELTKGHLRHMVGGRLPASAKTLCRDGCRELLYRFEFPERPGALMTFVSALHPEWSISIFHYRNHGADVGRIVVGVLVQDN EMKNWQRFLDDLGYPNWEETNNPAYCLFLGAQTV
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=282, Percent_Identity=35.4609929078014, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI33469958, Length=311, Percent_Identity=31.1897106109325, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI19923959, Length=314, Percent_Identity=29.9363057324841, Blast_Score=102, Evalue=8e-22, Organism=Escherichia coli, GI1790207, Length=508, Percent_Identity=50, Blast_Score=483, Evalue=1e-137, Organism=Escherichia coli, GI1789505, Length=315, Percent_Identity=38.0952380952381, Blast_Score=177, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71991565, Length=330, Percent_Identity=35.1515151515151, Blast_Score=161, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17537387, Length=325, Percent_Identity=36, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17508781, Length=301, Percent_Identity=29.2358803986711, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320930, Length=524, Percent_Identity=47.7099236641221, Blast_Score=468, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6322631, Length=301, Percent_Identity=35.8803986710963, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6319788, Length=319, Percent_Identity=25.705329153605, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI21355833, Length=378, Percent_Identity=33.8624338624339, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24645328, Length=316, Percent_Identity=32.9113924050633, Blast_Score=123, Evalue=3e-28,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56960; Mature: 56960
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYLQRILRARVYDVAHETPLELAKNLSRRLQNKIWLKREDLQPVFSFKLRGAYNRMSL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH LSKEELQRGVIASSAGNHAQGVALSASYLNCRAVIVMPITTPEMKVRAVRALGAEVALHG HHHHHHHHCHHHCCCCCCCCCEEEEEEEECEEEEEEEECCCCHHHHHHHHHHCCEEEECC ETYDEAYQEAMRRSEKDGLTFIHPFDDPEVIAGQGTIALEILRQIQDPPDAIYVAVGGGG CHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCC LIGGIATYVKSLWPQVEIIGVEPHDAAAMTLSLEAGERIQLPKVGLFADGVAVRQVGKHT HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCEECCCCCCEEECCHHHHHHHHHH FSLAQMHVDAMVTVSTDEICAAIKDVFEDTRSILEPAGALAIAGMKADIAKRDLQDRTLV HHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCEEE AVACGANMNFERLRFVAERAELGEEREAILAVEIPEQAGSLRKLCNVLAGKNLTEFSYRM EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH AEGDRAQIFIGVQVLDLNDRTKLLTRLQSSGFPCLDLSNDELTKGHLRHMVGGRLPASAK CCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCHHH TLCRDGCRELLYRFEFPERPGALMTFVSALHPEWSISIFHYRNHGADVGRIVVGVLVQDN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEEEEECC EMKNWQRFLDDLGYPNWEETNNPAYCLFLGAQTV CHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MDDYLQRILRARVYDVAHETPLELAKNLSRRLQNKIWLKREDLQPVFSFKLRGAYNRMSL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH LSKEELQRGVIASSAGNHAQGVALSASYLNCRAVIVMPITTPEMKVRAVRALGAEVALHG HHHHHHHHCHHHCCCCCCCCCEEEEEEEECEEEEEEEECCCCHHHHHHHHHHCCEEEECC ETYDEAYQEAMRRSEKDGLTFIHPFDDPEVIAGQGTIALEILRQIQDPPDAIYVAVGGGG CHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCC LIGGIATYVKSLWPQVEIIGVEPHDAAAMTLSLEAGERIQLPKVGLFADGVAVRQVGKHT HHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCEECCCCCCEEECCHHHHHHHHHH FSLAQMHVDAMVTVSTDEICAAIKDVFEDTRSILEPAGALAIAGMKADIAKRDLQDRTLV HHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCEEE AVACGANMNFERLRFVAERAELGEEREAILAVEIPEQAGSLRKLCNVLAGKNLTEFSYRM EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH AEGDRAQIFIGVQVLDLNDRTKLLTRLQSSGFPCLDLSNDELTKGHLRHMVGGRLPASAK CCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCHHH TLCRDGCRELLYRFEFPERPGALMTFVSALHPEWSISIFHYRNHGADVGRIVVGVLVQDN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEEEEECC EMKNWQRFLDDLGYPNWEETNNPAYCLFLGAQTV CHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA