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The map label for this gene is ribB [H]

Identifier: 124023215

GI number: 124023215

Start: 1316191

End: 1318083

Strand: Direct

Name: ribB [H]

Synonym: P9303_15131

Alternate gene names: 124023215

Gene position: 1316191-1318083 (Clockwise)

Preceding gene: 124023213

Following gene: 124023221

Centisome position: 49.06

GC content: 50.87

Gene sequence:

>1893_bases
ATGGTCCTCAAGCAATCTGATGGTTTGAAGACCGCCGTAGCCCGTAGCGCCGATAACCGCTACTCGGCTGCCTCGAACCT
GAGAAATGTCAGAGGCTGGAGAGCGATGGGTACTTTCCATTGCCTTCATCGGACGCCGGCTGATCGTACTGGTGTCGATA
ATGAACTCAGTACGTTCATCCCTAAGGCCCTGAGGACTTCTCCTATACCCGCTGAATCGGTCGAGATCCGCTTCGACGAC
ATTTCTGACGCACTTGCCGCGATCCGAAACGGTGAATGCGTTGTGGTTGTTGATGATGAGCGCAGAGAAAACGAGGGCGA
CCTGATTTGTGCTGCTCAGTTCGCTACGCCTGAGCAAATCAATTTCATGGCCACAGAGGCTCGTGGTCTGATCTGCCTTG
CTATGAAAGGCAGTCGCCTAGATCAACTTGACCTGCCGCTGATGGTTGATCGCAACACAGATGCCAACCAAACGGCATTT
ACCGTAAGCATCGATGCAGGCCCTGAGAAAGGGGTTTCTACTGGTATTTCAGCAGAGGATCGAGCGCGCACGATTCAAGT
TGCACTGCATCCGGAGACTCGTCCAAGAGACCTGCGCCGCCCAGGACATATTTTCCCCCTTAGAGCGAGTCAAGGAGGTG
TTCTCAAAAGGGCTGGACATACCGAATCCGCCGTGGATTTGTCACAGCTGGCAGGACTTGCTCCAGCTGGCGTGATCTGC
GAGATCCAAAACTCAGACGGGTCAATGGCAAGACTGCCGCAATTGCAAAACTATGCGCGGCGCTGGGGACTCAAGCTCAT
CAACATTGCCGATCTCATTCGTTACCGTCTTGAGAACGAACGCTTTGTATACCGTCAAGCCACTGCCGAGTTACCAAGTC
TCTTTGGCAGTTTTCAGGCTATCGGCTATTTAAATGGTTTGGATGGATCAGAACACATTGCTCTAGTCAAGGGCGATCCA
CGAGAACTGAAAGAACCAGTTTTAGTGCGCATGCACTCCGAATGTCTTACGGGAGATGCTTTTGGATCACTGCGCTGCGA
TTGTCGCCCCCAACTTGAAGCAGCGTTGGCTCGCATTGAACAGGAAGGTGAAGGCGTGGTTGTTTATCTTCGCCAGGAAG
GTCGCGGCATTGGTCTAATTAACAAATTAAAGGCCTATAGCCTTCAGGATGGCGGTCTAGACACTGTTGAAGCCAATGAA
AGTTTGGGTTTCCCTGCAGATCTGCGTAACTACGGGGTTGGTGCTCAAATTCTCACTGACCTTGGCATTCACCGTTTACG
CCTACTTACAAACAACCCACGCAAAATTGCTGGACTGGGTGGATATGGCTTACAAGTCGAAAGTCGTGTACCCCTGGTGA
TCTGTCCTGGAGATCACAACGCCGCTTATTTAGCTGTAAAGCGGGAAAAACTTGGACACTTGATGGATACTGGCAAATCA
GAGAATCAAGCTCCAGAAGTTGGACCTTTTGTTGTAGTTGCCTGGGACGGTGAGGTGAATGGAGAGACGCTGGCTAAGCT
GAGGACTCGTGCAAATGATTGGGCCACAAGCAATGAACTTGAGCTCATAGCAGAAAGCTCACCCCGTTTACTTGCCCTAT
GGGATCGCCCCCTCTTTGTATGGCGTGTATGTCCACGAGTCAAAACCTCTTCTGAGGTTTCATCAGATCCACTTAAAAAA
GCATCGCTGGAGTTACTGCTTCAAGAATTGATTCAATGGTCAGGGAGCCGTCGGATTGGCCTTCTGCGTACTGACCGCGC
TGAGCAAGCAATGCATCCTCCTCAGGATCTAAAGAGAGAAGAGCGGTCGTTGGCATCACTATTTAAAGATGATTTTTCCC
CACTAAAAGATTGGGATGCCTGGAGCCTTCCCAATCTGATCCTTTGGTCGTGA

Upstream 100 bases:

>100_bases
GAACTTCAGGATCATCAGGGATGGGTAAAAAAGGGCAAAGCTCACTCCATCGCCTGCCGGCACTTCGTTCGCCGCCCAGG
TAGGTGACATGGAGCTGAGG

Downstream 100 bases:

>100_bases
AAGAGTCCAACTATATATTTTCAATCCTCTTGAATGGTTACTTTATTGATCCTAGAGCCATTCTTTAAGGCTAAGACCAC
ATCGATGTTGGCAGCCTGAC

Product: bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein

Products: NA

Alternate protein names: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; GTP cyclohydrolase-2; GTP cyclohydrolase II [H]

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MVLKQSDGLKTAVARSADNRYSAASNLRNVRGWRAMGTFHCLHRTPADRTGVDNELSTFIPKALRTSPIPAESVEIRFDD
ISDALAAIRNGECVVVVDDERRENEGDLICAAQFATPEQINFMATEARGLICLAMKGSRLDQLDLPLMVDRNTDANQTAF
TVSIDAGPEKGVSTGISAEDRARTIQVALHPETRPRDLRRPGHIFPLRASQGGVLKRAGHTESAVDLSQLAGLAPAGVIC
EIQNSDGSMARLPQLQNYARRWGLKLINIADLIRYRLENERFVYRQATAELPSLFGSFQAIGYLNGLDGSEHIALVKGDP
RELKEPVLVRMHSECLTGDAFGSLRCDCRPQLEAALARIEQEGEGVVVYLRQEGRGIGLINKLKAYSLQDGGLDTVEANE
SLGFPADLRNYGVGAQILTDLGIHRLRLLTNNPRKIAGLGGYGLQVESRVPLVICPGDHNAAYLAVKREKLGHLMDTGKS
ENQAPEVGPFVVVAWDGEVNGETLAKLRTRANDWATSNELELIAESSPRLLALWDRPLFVWRVCPRVKTSSEVSSDPLKK
ASLELLLQELIQWSGSRRIGLLRTDRAEQAMHPPQDLKREERSLASLFKDDFSPLKDWDAWSLPNLILWS

Sequences:

>Translated_630_residues
MVLKQSDGLKTAVARSADNRYSAASNLRNVRGWRAMGTFHCLHRTPADRTGVDNELSTFIPKALRTSPIPAESVEIRFDD
ISDALAAIRNGECVVVVDDERRENEGDLICAAQFATPEQINFMATEARGLICLAMKGSRLDQLDLPLMVDRNTDANQTAF
TVSIDAGPEKGVSTGISAEDRARTIQVALHPETRPRDLRRPGHIFPLRASQGGVLKRAGHTESAVDLSQLAGLAPAGVIC
EIQNSDGSMARLPQLQNYARRWGLKLINIADLIRYRLENERFVYRQATAELPSLFGSFQAIGYLNGLDGSEHIALVKGDP
RELKEPVLVRMHSECLTGDAFGSLRCDCRPQLEAALARIEQEGEGVVVYLRQEGRGIGLINKLKAYSLQDGGLDTVEANE
SLGFPADLRNYGVGAQILTDLGIHRLRLLTNNPRKIAGLGGYGLQVESRVPLVICPGDHNAAYLAVKREKLGHLMDTGKS
ENQAPEVGPFVVVAWDGEVNGETLAKLRTRANDWATSNELELIAESSPRLLALWDRPLFVWRVCPRVKTSSEVSSDPLKK
ASLELLLQELIQWSGSRRIGLLRTDRAEQAMHPPQDLKREERSLASLFKDDFSPLKDWDAWSLPNLILWS
>Mature_630_residues
MVLKQSDGLKTAVARSADNRYSAASNLRNVRGWRAMGTFHCLHRTPADRTGVDNELSTFIPKALRTSPIPAESVEIRFDD
ISDALAAIRNGECVVVVDDERRENEGDLICAAQFATPEQINFMATEARGLICLAMKGSRLDQLDLPLMVDRNTDANQTAF
TVSIDAGPEKGVSTGISAEDRARTIQVALHPETRPRDLRRPGHIFPLRASQGGVLKRAGHTESAVDLSQLAGLAPAGVIC
EIQNSDGSMARLPQLQNYARRWGLKLINIADLIRYRLENERFVYRQATAELPSLFGSFQAIGYLNGLDGSEHIALVKGDP
RELKEPVLVRMHSECLTGDAFGSLRCDCRPQLEAALARIEQEGEGVVVYLRQEGRGIGLINKLKAYSLQDGGLDTVEANE
SLGFPADLRNYGVGAQILTDLGIHRLRLLTNNPRKIAGLGGYGLQVESRVPLVICPGDHNAAYLAVKREKLGHLMDTGKS
ENQAPEVGPFVVVAWDGEVNGETLAKLRTRANDWATSNELELIAESSPRLLALWDRPLFVWRVCPRVKTSSEVSSDPLKK
ASLELLLQELIQWSGSRRIGLLRTDRAEQAMHPPQDLKREERSLASLFKDDFSPLKDWDAWSLPNLILWS

Specific function: Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the central section; belongs to the GTP cyclohydrolase II family [H]

Homologues:

Organism=Escherichia coli, GI1789420, Length=204, Percent_Identity=49.5098039215686, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI1787533, Length=192, Percent_Identity=51.5625, Blast_Score=196, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320695, Length=206, Percent_Identity=41.2621359223301, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6319438, Length=170, Percent_Identity=46.4705882352941, Blast_Score=128, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422
- InterPro:   IPR000926
- InterPro:   IPR016299 [H]

Pfam domain/function: PF00926 DHBP_synthase; PF00925 GTP_cyclohydro2 [H]

EC number: =4.1.99.12; =3.5.4.25 [H]

Molecular weight: Translated: 69524; Mature: 69524

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKQSDGLKTAVARSADNRYSAASNLRNVRGWRAMGTFHCLHRTPADRTGVDNELSTFI
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
PKALRTSPIPAESVEIRFDDISDALAAIRNGECVVVVDDERRENEGDLICAAQFATPEQI
HHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
NFMATEARGLICLAMKGSRLDQLDLPLMVDRNTDANQTAFTVSIDAGPEKGVSTGISAED
EEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC
RARTIQVALHPETRPRDLRRPGHIFPLRASQGGVLKRAGHTESAVDLSQLAGLAPAGVIC
CCEEEEEEECCCCCCHHCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCEEE
EIQNSDGSMARLPQLQNYARRWGLKLINIADLIRYRLENERFVYRQATAELPSLFGSFQA
EEECCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
IGYLNGLDGSEHIALVKGDPRELKEPVLVRMHSECLTGDAFGSLRCDCRPQLEAALARIE
HEEEECCCCCCEEEEEECCHHHHCCHHHEEEHHHHHCCCCCCCEECCCCHHHHHHHHHHH
QEGEGVVVYLRQEGRGIGLINKLKAYSLQDGGLDTVEANESLGFPADLRNYGVGAQILTD
CCCCCEEEEEEECCCCCCHHHHHHHEEECCCCCCEEECCCCCCCCHHHHHCCCCHHHHHH
LGIHRLRLLTNNPRKIAGLGGYGLQVESRVPLVICPGDHNAAYLAVKREKLGHLMDTGKS
HCHHEEEEEECCCCEEEECCCCCEEECCCCCEEEECCCCCEEEEEEEHHHHHHHHHCCCC
ENQAPEVGPFVVVAWDGEVNGETLAKLRTRANDWATSNELELIAESSPRLLALWDRPLFV
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEE
WRVCPRVKTSSEVSSDPLKKASLELLLQELIQWSGSRRIGLLRTDRAEQAMHPPQDLKRE
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHH
ERSLASLFKDDFSPLKDWDAWSLPNLILWS
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MVLKQSDGLKTAVARSADNRYSAASNLRNVRGWRAMGTFHCLHRTPADRTGVDNELSTFI
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
PKALRTSPIPAESVEIRFDDISDALAAIRNGECVVVVDDERRENEGDLICAAQFATPEQI
HHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
NFMATEARGLICLAMKGSRLDQLDLPLMVDRNTDANQTAFTVSIDAGPEKGVSTGISAED
EEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC
RARTIQVALHPETRPRDLRRPGHIFPLRASQGGVLKRAGHTESAVDLSQLAGLAPAGVIC
CCEEEEEEECCCCCCHHCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCEEE
EIQNSDGSMARLPQLQNYARRWGLKLINIADLIRYRLENERFVYRQATAELPSLFGSFQA
EEECCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
IGYLNGLDGSEHIALVKGDPRELKEPVLVRMHSECLTGDAFGSLRCDCRPQLEAALARIE
HEEEECCCCCCEEEEEECCHHHHCCHHHEEEHHHHHCCCCCCCEECCCCHHHHHHHHHHH
QEGEGVVVYLRQEGRGIGLINKLKAYSLQDGGLDTVEANESLGFPADLRNYGVGAQILTD
CCCCCEEEEEEECCCCCCHHHHHHHEEECCCCCCEEECCCCCCCCHHHHHCCCCHHHHHH
LGIHRLRLLTNNPRKIAGLGGYGLQVESRVPLVICPGDHNAAYLAVKREKLGHLMDTGKS
HCHHEEEEEECCCCEEEECCCCCEEECCCCCEEEECCCCCEEEEEEEHHHHHHHHHCCCC
ENQAPEVGPFVVVAWDGEVNGETLAKLRTRANDWATSNELELIAESSPRLLALWDRPLFV
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEE
WRVCPRVKTSSEVSSDPLKKASLELLLQELIQWSGSRRIGLLRTDRAEQAMHPPQDLKRE
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHH
ERSLASLFKDDFSPLKDWDAWSLPNLILWS
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]