| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023180
Identifier: 124023180
GI number: 124023180
Start: 1270222
End: 1272027
Strand: Direct
Name: 124023180
Synonym: P9303_14761
Alternate gene names: NA
Gene position: 1270222-1272027 (Clockwise)
Preceding gene: 124023176
Following gene: 124023184
Centisome position: 47.35
GC content: 48.45
Gene sequence:
>1806_bases GTGTCTGCGACCAAAACTTGTTCCACTACGCAGGTGCCCTTGGTGGTCTGGGGTGGAGGCACAGGAGGCGTCGCCTCAGC CGTACAAGCTGCTCGACATGGAATTAGAACTCTGCTGTTAACACCAGGCGCGTGGCTTGGTGGAATGGTCAGTGCAGCAG GCGTTTCGGCTCCAGACGGCCATGAACTCAGTTGCTGGCAGACAGGCTTGTGGGGGGCCTTCCTTCAAGACATCGCCAAA GTTGAACAGGATGGACTGGATCAGAACTGGGTGAGTTGCTTTGGTTTTAATCCAGCTCGCGCAGAAGAGGTTTTGCGGAG CTGGGTTGTCGATCTCCCCAATCTCGAATGGTGGTCTGACGTTCAGCTCAAATCACTGTTACGTGAGGGGGATCGCCTTG TTTTGCTTGAGCTGGAGCTTGAAGGGCGACAGCATCAACTGCGCTTCGACTTATTCATTGATGGAAGTGATTTAGGCGAC AGCTTTTCACTCGCAGACATTTCACACCGTTGGGGTTGGGAATCACAAGAACTCTGGAATGAGCCAAGCGCCCCTTCTGC AAAACAATTGAATTGCGATCCATTCTTTGCCAGCCAGCCTGTTCAATCACCTACTTGGGTTGTGATGGGTCAACTCGATC AACATGCACAATCACCTTCATCACCAGGGTGCTTGCCTCGACCATTCGAAGGTGCAACTGAGGCGTTTGGTTTTGAGCGC ACCGTTACCTATGGCCGCCTTCCAGGCGGTTTAGTAATGCTCAACTGGCCCCTTCATGGAAACGACTGGCATAAAGGCTT GGAGCGTATACGCAGCTCAGACGTCAAAATTAAAAACCAGCTTGCTGCAGAAATGCAGCTGTATAGCTTGTCATTCCTAC AAGCTCTTCAAACAGTTAGTGAGGGTTGGCTTAAGCCTGGCAAGGTTTTTCCAGGGATCAATCAAAGCCTGGCATTGATG CCCTATTGGCGAGAAGGTCGACGCCTTAAAGGTCAATACACCTTAGTGGAAGGAGATCTTCTGCCATTAGCCTCTGGTGC AGCCCGAGGACCAATCCCTTTAGATAAACAGGGACGTTGCACCAGTATTGCTGTAGGGACTTACGCTAATGATCATCATT ATCCTGGTAAAGATTGGCCCTTAGCCTCAAAAAGTTGTAGATGGGGTGGGAGATGGACAGGTACTCCATTCTGCATTCCT TACGGGGCTCTACTGAGTAGCGAAGTGGAGAATATTCTGATAGCTGATAAGGCTTTTAGTGTGAGTCATATAGCCAATGG TGCAACTCGATTACAGCCAATGATTTTTAATCTTGGCCAGGCTGCTGGTATGGCAGCAGCTATAGCCTTGAAAAAGAGGC TTCAACCAGCAGAAGTTGATATTTCAGAAATACAGCATGAACTATTGCATGATATTTATGCCCCAGCCGCTATTGTTCCA ATTTGGGATTGGCCTGCATGGCATCCTCACTGGCGTAATGCACAGAAATTTGTTTTGGCGCAACCAGAGTGCCTCAGCAA CCATAGCGTGATTGAAGGTTTTAATCTTAAAGCAAATGTAGGAGAAATGCCACTGCCAGATCAAACACCACTCAATAAAC ATGTGAAAAAGTTTTCAGGCTACCTTCGTATTCATTCTGATCAGACATTCTCTCTTGATACCAAGTTTAAATCCTGGCGA CTAATAACACTGGAGCCGGCATTAAAGCGGTGGCTGGAATCATGTGAAGACCAGCAGAATGTACACCTTCTAGCAGTTGC CAATCCATGGGGACCATGGCTGAGGTTGATTCGCATTTTAGATTAA
Upstream 100 bases:
>100_bases TCTATGAACAATTTGTTGCGCCTCGCCAGCGTTGTTTAAGCAAGCTTTGTTATGAAGCTCAATTGCTTTCTGGCAAAGAT GATTATGTTTTGGGATGACA
Downstream 100 bases:
>100_bases TAGCAGCTTTTGGTAGTTTGTTTTTTGTTTCTTTGCTTTGAGAAGCTACTTGGCGACCAACTCAATTTGATCAGTCAATG GATCAATTGCAAGAACTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAK VEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD SFSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALM PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP YGALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWR LITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD
Sequences:
>Translated_601_residues MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAK VEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD SFSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALM PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP YGALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWR LITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD >Mature_600_residues SATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAKV EQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDS FSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFERT VTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALMP YWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPY GALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVPI WDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWRL ITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66753; Mature: 66622
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDG CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCH VQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC EPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCHHHHCCCCC TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVS EEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EGWLKPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC HHCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILIADKAFS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCC VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEE IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSG ECCCCCCCCCCCCCCEEEEECCHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC YLRIHSDQTFSLDTKFKSWRLITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRIL EEEEECCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC D C >Mature Secondary Structure SATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDG CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCH VQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC EPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCHHHHCCCCC TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVS EEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EGWLKPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC HHCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILIADKAFS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCC VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEE IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSG ECCCCCCCCCCCCCCEEEEECCHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC YLRIHSDQTFSLDTKFKSWRLITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRIL EEEEECCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA