| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023100
Identifier: 124023100
GI number: 124023100
Start: 1193545
End: 1194201
Strand: Direct
Name: 124023100
Synonym: P9303_13951
Alternate gene names: NA
Gene position: 1193545-1194201 (Clockwise)
Preceding gene: 124023099
Following gene: 124023102
Centisome position: 44.49
GC content: 53.42
Gene sequence:
>657_bases ATGTTGGTCCCTTTGCGTCCAGGAGAGCTTCAGAGGCTTATCCCTGCAGTGGCCACCAGTAATCAATTCGCAGCGGCCCT TGGCAACCCTCGCAAGATTCTGCAGAGGGTCATGATCGCAGCCATTGGAGGTGTGATCACACTATTGATTAGTCAGAGTC AGCTAGCGAGTCGATGGGGCGCTGTCTGGCTTGTTGTTGGAGTGGCTCTTCTGCTTTATGTGCTTTGGGGCCCAATCGTT GAAGCGGGTCAGCGCAATGCAGGACTTCGTCGTTATCCGGCGGCGGCCATCTTCGAAGGTGAGGTGGCCAATGTGTTCAC CCGTGAACGAGTGCTGGAACGTCATGAGCAAGCGAACAAGCTCGGAGAATTGGAGCTTGTTGAGAACAGACGTACTTGGA TTGTTCTTGAGTTAGAGGATGAAGATGGATATTTGGGTCAATTGAGCTTTCCGATGTCCAAGAAGCATCAGTCCATCCGA GCTGGATCTCTCATTCGTTGCCTGGTGCTGAGCGATCGCAAGGATTTCAGCCGTATCGCTGCACTGACTGATGCATGGTT GCCAGGGCAGCGGTTGTGGGTCGGGGAGTATCCCTTTTTGCTAAGGCCTGCATTTGAGGAGCTGTGTCAGTTGCGTTTTG CTCGCCAGACCAGCTGA
Upstream 100 bases:
>100_bases CCTACATGCCAGGTGTGTTGCTAACCGTTCGTAAGGTGCGACAGCTTCAAGGTCTGGTTTATGGCCTTGAACGCCTCATC TGAAATTCATTTGCGTGTCG
Downstream 100 bases:
>100_bases ATCGCGCTAAGAGATTTTTCTTGCCACTAGCTTGAAGAGTCTTAGGGGTGCAAATGGCATCGTTCGTTTGACTTATACGA TTACTCGATTCCTCTGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLVPLRPGELQRLIPAVATSNQFAAALGNPRKILQRVMIAAIGGVITLLISQSQLASRWGAVWLVVGVALLLYVLWGPIV EAGQRNAGLRRYPAAAIFEGEVANVFTRERVLERHEQANKLGELELVENRRTWIVLELEDEDGYLGQLSFPMSKKHQSIR AGSLIRCLVLSDRKDFSRIAALTDAWLPGQRLWVGEYPFLLRPAFEELCQLRFARQTS
Sequences:
>Translated_218_residues MLVPLRPGELQRLIPAVATSNQFAAALGNPRKILQRVMIAAIGGVITLLISQSQLASRWGAVWLVVGVALLLYVLWGPIV EAGQRNAGLRRYPAAAIFEGEVANVFTRERVLERHEQANKLGELELVENRRTWIVLELEDEDGYLGQLSFPMSKKHQSIR AGSLIRCLVLSDRKDFSRIAALTDAWLPGQRLWVGEYPFLLRPAFEELCQLRFARQTS >Mature_218_residues MLVPLRPGELQRLIPAVATSNQFAAALGNPRKILQRVMIAAIGGVITLLISQSQLASRWGAVWLVVGVALLLYVLWGPIV EAGQRNAGLRRYPAAAIFEGEVANVFTRERVLERHEQANKLGELELVENRRTWIVLELEDEDGYLGQLSFPMSKKHQSIR AGSLIRCLVLSDRKDFSRIAALTDAWLPGQRLWVGEYPFLLRPAFEELCQLRFARQTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24485; Mature: 24485
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPLRPGELQRLIPAVATSNQFAAALGNPRKILQRVMIAAIGGVITLLISQSQLASRWG CCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWLVVGVALLLYVLWGPIVEAGQRNAGLRRYPAAAIFEGEVANVFTRERVLERHEQANK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHH LGELELVENRRTWIVLELEDEDGYLGQLSFPMSKKHQSIRAGSLIRCLVLSDRKDFSRIA CCCEEEECCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHCHHEEEEECCCCHHHHHHH ALTDAWLPGQRLWVGEYPFLLRPAFEELCQLRFARQTS HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLVPLRPGELQRLIPAVATSNQFAAALGNPRKILQRVMIAAIGGVITLLISQSQLASRWG CCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWLVVGVALLLYVLWGPIVEAGQRNAGLRRYPAAAIFEGEVANVFTRERVLERHEQANK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHH LGELELVENRRTWIVLELEDEDGYLGQLSFPMSKKHQSIRAGSLIRCLVLSDRKDFSRIA CCCEEEECCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHCHHEEEEECCCCHHHHHHH ALTDAWLPGQRLWVGEYPFLLRPAFEELCQLRFARQTS HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA