| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is fur [H]
Identifier: 124023044
GI number: 124023044
Start: 1145740
End: 1146300
Strand: Reverse
Name: fur [H]
Synonym: P9303_13391
Alternate gene names: 124023044
Gene position: 1146300-1145740 (Counterclockwise)
Preceding gene: 124023045
Following gene: 124023040
Centisome position: 42.73
GC content: 49.73
Gene sequence:
>561_bases TTGCTTGCAGGAATCTCAAGCCATCAATTGCGCCAATCACTCTCATTAGCGGTTACTGTTGAGAAATGCATTGCAGAGGT GGCCTTGCCTACTTCTTCGTCCCTGGCCCGTATCCATGGACAACTTGAGGTTGGCTTGCATCAGGGTGGTCGACGTTTAA CGCCTCAAAGACGCCGCGTTCTTGATCTCTTTGAAAGTATTGGTTCTGGCATTCACCTCAGTGCTGAAGAAGTCCATCAG CAACTTCTAGAAGCAAACTCGAAGGTGTCTCTAGCAACGATCTACCGCACGCTGCGCTTGCTTGTCGAGATGGGTTTTCT ACACGAGTTGGAAATAAGCGATGGCGGACATCGCTTTGAATTAGCAAGTCACGACCATCCTGATCATCACCATTTGGTAT GCGTGCGTTGTGGTCGTACTGAGGAGTTTGAGAGCAAGCCAGTACTGGAAGCTGGACGCTCTGCTGCTGAGCGGATCGGG TTCCAACTGATCGAGTCAACATTGAATGTAAGGGCTCTATGTCCGTCTTGTCAGAGACCCTCTACAACCAATGTCCATTG A
Upstream 100 bases:
>100_bases TAGTAGCGCTATCACGCCTTGCCACAAAGGCAGAACATCAACGATTGGCTTGGCTCAAACAACTTTAAAGAAACAACGCG ATCTACCTTGAGATGCTGCC
Downstream 100 bases:
>100_bases TGGCTGATGACAAACATCAGTGTTGAGAATGCTGATCACACGGCATCCAATGGGTTCCCATCTGGTGAGCGCCTTTGCAT CCCAACTCACGTGCCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLAGISSHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEEVHQ QLLEANSKVSLATIYRTLRLLVEMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAERIG FQLIESTLNVRALCPSCQRPSTTNVH
Sequences:
>Translated_186_residues MLAGISSHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEEVHQ QLLEANSKVSLATIYRTLRLLVEMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAERIG FQLIESTLNVRALCPSCQRPSTTNVH >Mature_186_residues MLAGISSHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRVLDLFESIGSGIHLSAEEVHQ QLLEANSKVSLATIYRTLRLLVEMGFLHELEISDGGHRFELASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAERIG FQLIESTLNVRALCPSCQRPSTTNVH
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates genes involved in iron scavenging or photosynthetic electron transport [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=27.4809160305344, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI87082363, Length=143, Percent_Identity=32.8671328671329, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 20575; Mature: 20575
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGISSHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECHHCCCCCCCHHHHHH LDLFESIGSGIHLSAEEVHQQLLEANSKVSLATIYRTLRLLVEMGFLHELEISDGGHRFE HHHHHHHCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEE LASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAERIGFQLIESTLNVRALCPSCQRP ECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC STTNVH CCCCCC >Mature Secondary Structure MLAGISSHQLRQSLSLAVTVEKCIAEVALPTSSSLARIHGQLEVGLHQGGRRLTPQRRRV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECHHCCCCCCCHHHHHH LDLFESIGSGIHLSAEEVHQQLLEANSKVSLATIYRTLRLLVEMGFLHELEISDGGHRFE HHHHHHHCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEE LASHDHPDHHHLVCVRCGRTEEFESKPVLEAGRSAAERIGFQLIESTLNVRALCPSCQRP ECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC STTNVH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704986 [H]