Click here to switch to the map view.

The map label for this gene is sepF [H]

Identifier: 124023040

GI number: 124023040

Start: 1144532

End: 1144939

Strand: Reverse

Name: sepF [H]

Synonym: P9303_13351

Alternate gene names: 124023040

Gene position: 1144939-1144532 (Counterclockwise)

Preceding gene: 124023044

Following gene: 124023037

Centisome position: 42.68

GC content: 50.49

Gene sequence:

>408_bases
ATGCACCACAAAATCCCCTCGCTCGCTTTTGGCGAGCGAGGGCTGGGTCAAACCCATCGACTGCACCAAAACTCCACAAG
CGTCGAGGCTATGGACGCACCGTTTGCTGACTGGTGGCACGAGATCGTCGTGTTCAAACCATTGGTTTTTGAAGAGGCCT
TTGACGCCGTTTTGGCTGTCCGTGAGCAGCACACCGTTTTGCTCAACATCTGTCGGATGGACCCAGAACATGCCCGGCGC
ACCATTGATTTTGTGATTGGAGCTGTGACTGCACTTGATGGACAACATGTGCGTATTGACGAGAAAGTATTCCTATTTGC
ACCTTCACTTGTCGCGATCAAGACGTTGCAAGGTTCCCTTATAAGAGATTCAAGCAGCAAATTATCGAGCGCTGATCATC
AGCTTTAA

Upstream 100 bases:

>100_bases
GTTGCAGCAATCAACAGTAGCGATCCACTTAATGTAGTTGAGGCTAATCGGCCCATGAGCTCCATTATTTCCACCATCCA
TGATGCATCCAGGTTGAAGG

Downstream 100 bases:

>100_bases
GCACAGGGCCTTGAATGATTAACCGATCTCTCCCTCAGATTGAAGGGCGCCGCCACAGCTTGATCCATTGCCTGCAGTGC
AACCAAAACAATGAGGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MHHKIPSLAFGERGLGQTHRLHQNSTSVEAMDAPFADWWHEIVVFKPLVFEEAFDAVLAVREQHTVLLNICRMDPEHARR
TIDFVIGAVTALDGQHVRIDEKVFLFAPSLVAIKTLQGSLIRDSSSKLSSADHQL

Sequences:

>Translated_135_residues
MHHKIPSLAFGERGLGQTHRLHQNSTSVEAMDAPFADWWHEIVVFKPLVFEEAFDAVLAVREQHTVLLNICRMDPEHARR
TIDFVIGAVTALDGQHVRIDEKVFLFAPSLVAIKTLQGSLIRDSSSKLSSADHQL
>Mature_135_residues
MHHKIPSLAFGERGLGQTHRLHQNSTSVEAMDAPFADWWHEIVVFKPLVFEEAFDAVLAVREQHTVLLNICRMDPEHARR
TIDFVIGAVTALDGQHVRIDEKVFLFAPSLVAIKTLQGSLIRDSSSKLSSADHQL

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 15164; Mature: 15164

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHKIPSLAFGERGLGQTHRLHQNSTSVEAMDAPFADWWHEIVVFKPLVFEEAFDAVLAV
CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REQHTVLLNICRMDPEHARRTIDFVIGAVTALDGQHVRIDEKVFLFAPSLVAIKTLQGSL
HHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHCCC
IRDSSSKLSSADHQL
CCCCCHHHCCCCCCC
>Mature Secondary Structure
MHHKIPSLAFGERGLGQTHRLHQNSTSVEAMDAPFADWWHEIVVFKPLVFEEAFDAVLAV
CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
REQHTVLLNICRMDPEHARRTIDFVIGAVTALDGQHVRIDEKVFLFAPSLVAIKTLQGSL
HHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHCCC
IRDSSSKLSSADHQL
CCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA