| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is met17 [H]
Identifier: 124023024
GI number: 124023024
Start: 1126436
End: 1127764
Strand: Reverse
Name: met17 [H]
Synonym: P9303_13191
Alternate gene names: 124023024
Gene position: 1127764-1126436 (Counterclockwise)
Preceding gene: 124023025
Following gene: 124023023
Centisome position: 42.04
GC content: 50.49
Gene sequence:
>1329_bases TTGACTTCACATCGCTTCGAAACCCTCCAGCTTCATGCCGGCCAGGTAGCTGATCCTGTCACGAACTCACGAGCTGTACC CATTTATCAAACCAGTTCGTATGTCTTTAATGACGCTGAACATGGTGCCAACCTGTTTGGTCTTAAAGAATTCGGCAACA TTTACACCCGTCTGATGAACCCCACGACGGATGTGTTTGAAAAGCGTGTTGCGGCTCTTGAGGGAGGGATTGCTGCTGTA GCGACAGCTTCCGGACAATCCGCCCAGTTCCTGGCAATTACAAACTGCATGCAGGCTGGTGACAATCTTGTCTCAACATC CTTCTTGTATGGAGGAACCTACAATCAATTCAAGGTGCAGTTTCCCCGCCTTGGCATTGATGTGAAGTTTGCGGATGGTG ATGATGTTGATAGCTTTGCCACACAAATCGATGCCAACACAAAAGCAATTTATGTAGAGTCGATGGGGAACCCTCGCTTC AATATCCCTGACTTTAAAGGCCTTTCAGGCTTAGCAAAAGACATGGGAATCCCCTTAATTGTTGACAACACCCTTGGAGC AGCTGGTGCTTTGATTCGGCCCATAGAGCATGGCGCTGATGTGGTGGTGGAAAGTGCGACCAAATGGATTGGAGGCCATG GCACCAGCCTTGGTGGAGTGCTTGTGGATGCTGGCACCTTTAACTGGGGCAATGGCAAGTTCCCACTAATGAGTGAGCCA AGCGCGGCATATCACGGTCTGGTGCACTGGGATGCTTTCGGGTTCGGCAGCGACATCTGCTCCATGCTCGGCGTTCCAAG CAATCGCAATGTGGCCTTTGCACTGCGAGCTCGAGTTGAGGGCCTGCGCGACTGGGGAGCAGCTCTTAGTCCATTCAATT CATTCCTACTTTTGCAAGGGCTCGAAACACTGAGTTTGCGAGTGGAGCGCCATGCATCCAATGCCATGGCTCTTGCTACA TGGCTTCAGGATCATCCCAAGGTTGCCAGTGTCAACTATCCCGGCCTGAAAAATGACCCATACCACGCACAAGCCAAAAC ATACCTAACGAATCGAGGCATGGGATGCATGCTGATGTTCTCCCTTAAAGGAGGCTTTGATGATGCCGTGAGCTTCATCA ATGGTCTTGAATTAGCTAGCCATCTTGCCAATGTTGGTGATGCCAAGACCTTGGTGATTCATCCTGCATCCACCACGCAT CAACAACTTTCTGCTCAAGAGCAGGAATCTGCAGGAGTCACTCCCACAATGGTTAGGGTATCTGTTGGCCTTGAACACAT CGAAGACATCAAGGCTGATTTTGAACAGGCCCTAGCGGTCATCAGCTGA
Upstream 100 bases:
>100_bases CCATCCTTAGCAAAGACAGATAAAGCTGATCTACCTGACGACTGGAACCGCGCCTGAGACTAAGTTGCTAGAAAGAAGAG ACCTTCCTGTTTACGTGTAG
Downstream 100 bases:
>100_bases GACTGGAGGCATAGATGGCGCTGATCCTGCCACGCAGTTATCACAAGATCGCCGCGGTGGAGAAGAACCGGATCTCATGG ATAGAGCCGGAACTTGCAGA
Product: O-acetyl homoserine sulfhydrylase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTSHRFETLQLHAGQVADPVTNSRAVPIYQTSSYVFNDAEHGANLFGLKEFGNIYTRLMNPTTDVFEKRVAALEGGIAAV ATASGQSAQFLAITNCMQAGDNLVSTSFLYGGTYNQFKVQFPRLGIDVKFADGDDVDSFATQIDANTKAIYVESMGNPRF NIPDFKGLSGLAKDMGIPLIVDNTLGAAGALIRPIEHGADVVVESATKWIGGHGTSLGGVLVDAGTFNWGNGKFPLMSEP SAAYHGLVHWDAFGFGSDICSMLGVPSNRNVAFALRARVEGLRDWGAALSPFNSFLLLQGLETLSLRVERHASNAMALAT WLQDHPKVASVNYPGLKNDPYHAQAKTYLTNRGMGCMLMFSLKGGFDDAVSFINGLELASHLANVGDAKTLVIHPASTTH QQLSAQEQESAGVTPTMVRVSVGLEHIEDIKADFEQALAVIS
Sequences:
>Translated_442_residues MTSHRFETLQLHAGQVADPVTNSRAVPIYQTSSYVFNDAEHGANLFGLKEFGNIYTRLMNPTTDVFEKRVAALEGGIAAV ATASGQSAQFLAITNCMQAGDNLVSTSFLYGGTYNQFKVQFPRLGIDVKFADGDDVDSFATQIDANTKAIYVESMGNPRF NIPDFKGLSGLAKDMGIPLIVDNTLGAAGALIRPIEHGADVVVESATKWIGGHGTSLGGVLVDAGTFNWGNGKFPLMSEP SAAYHGLVHWDAFGFGSDICSMLGVPSNRNVAFALRARVEGLRDWGAALSPFNSFLLLQGLETLSLRVERHASNAMALAT WLQDHPKVASVNYPGLKNDPYHAQAKTYLTNRGMGCMLMFSLKGGFDDAVSFINGLELASHLANVGDAKTLVIHPASTTH QQLSAQEQESAGVTPTMVRVSVGLEHIEDIKADFEQALAVIS >Mature_441_residues TSHRFETLQLHAGQVADPVTNSRAVPIYQTSSYVFNDAEHGANLFGLKEFGNIYTRLMNPTTDVFEKRVAALEGGIAAVA TASGQSAQFLAITNCMQAGDNLVSTSFLYGGTYNQFKVQFPRLGIDVKFADGDDVDSFATQIDANTKAIYVESMGNPRFN IPDFKGLSGLAKDMGIPLIVDNTLGAAGALIRPIEHGADVVVESATKWIGGHGTSLGGVLVDAGTFNWGNGKFPLMSEPS AAYHGLVHWDAFGFGSDICSMLGVPSNRNVAFALRARVEGLRDWGAALSPFNSFLLLQGLETLSLRVERHASNAMALATW LQDHPKVASVNYPGLKNDPYHAQAKTYLTNRGMGCMLMFSLKGGFDDAVSFINGLELASHLANVGDAKTLVIHPASTTHQ QLSAQEQESAGVTPTMVRVSVGLEHIEDIKADFEQALAVIS
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=437, Percent_Identity=30.2059496567506, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI25453487, Length=436, Percent_Identity=27.5229357798165, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI299473759, Length=437, Percent_Identity=27.2311212814645, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1790375, Length=410, Percent_Identity=30.7317073170732, Blast_Score=171, Evalue=8e-44, Organism=Escherichia coli, GI1789383, Length=450, Percent_Identity=22, Blast_Score=102, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71980708, Length=453, Percent_Identity=29.8013245033113, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17538055, Length=439, Percent_Identity=30.2961275626424, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17560056, Length=390, Percent_Identity=30.2564102564103, Blast_Score=157, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323333, Length=455, Percent_Identity=50.1098901098901, Blast_Score=413, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319307, Length=443, Percent_Identity=31.1512415349887, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321254, Length=466, Percent_Identity=24.6781115879828, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321170, Length=350, Percent_Identity=26.5714285714286, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI19922554, Length=443, Percent_Identity=28.8939051918736, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 47347; Mature: 47216
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHRFETLQLHAGQVADPVTNSRAVPIYQTSSYVFNDAEHGANLFGLKEFGNIYTRLMN CCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEECCHHCCCCEEEHHHHHHHHHHHCC PTTDVFEKRVAALEGGIAAVATASGQSAQFLAITNCMQAGDNLVSTSFLYGGTYNQFKVQ CHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHCCCCEEEEEEEECCCCCEEEEE FPRLGIDVKFADGDDVDSFATQIDANTKAIYVESMGNPRFNIPDFKGLSGLAKDMGIPLI ECEECEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCEE VDNTLGAAGALIRPIEHGADVVVESATKWIGGHGTSLGGVLVDAGTFNWGNGKFPLMSEP EECCCCCCHHHHHHHHCCCHHEEHHHHHHHCCCCCCCCCEEEECCEEECCCCCCCCCCCC SAAYHGLVHWDAFGFGSDICSMLGVPSNRNVAFALRARVEGLRDWGAALSPFNSFLLLQG CHHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC LETLSLRVERHASNAMALATWLQDHPKVASVNYPGLKNDPYHAQAKTYLTNRGMGCMLMF HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEE SLKGGFDDAVSFINGLELASHLANVGDAKTLVIHPASTTHQQLSAQEQESAGVTPTMVRV EECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE SVGLEHIEDIKADFEQALAVIS HHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSHRFETLQLHAGQVADPVTNSRAVPIYQTSSYVFNDAEHGANLFGLKEFGNIYTRLMN CCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEECCHHCCCCEEEHHHHHHHHHHHCC PTTDVFEKRVAALEGGIAAVATASGQSAQFLAITNCMQAGDNLVSTSFLYGGTYNQFKVQ CHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHCCCCEEEEEEEECCCCCEEEEE FPRLGIDVKFADGDDVDSFATQIDANTKAIYVESMGNPRFNIPDFKGLSGLAKDMGIPLI ECEECEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCEE VDNTLGAAGALIRPIEHGADVVVESATKWIGGHGTSLGGVLVDAGTFNWGNGKFPLMSEP EECCCCCCHHHHHHHHCCCHHEEHHHHHHHCCCCCCCCCEEEECCEEECCCCCCCCCCCC SAAYHGLVHWDAFGFGSDICSMLGVPSNRNVAFALRARVEGLRDWGAALSPFNSFLLLQG CHHHCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC LETLSLRVERHASNAMALATWLQDHPKVASVNYPGLKNDPYHAQAKTYLTNRGMGCMLMF HHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEE SLKGGFDDAVSFINGLELASHLANVGDAKTLVIHPASTTHQQLSAQEQESAGVTPTMVRV EECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE SVGLEHIEDIKADFEQALAVIS HHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]