| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023025
Identifier: 124023025
GI number: 124023025
Start: 1127808
End: 1128503
Strand: Reverse
Name: 124023025
Synonym: P9303_13201
Alternate gene names: NA
Gene position: 1128503-1127808 (Counterclockwise)
Preceding gene: 124023027
Following gene: 124023024
Centisome position: 42.07
GC content: 53.88
Gene sequence:
>696_bases GTGGCCAAGGAATCCACTCACCGAGCTGATGAGCTCAAAGAACTTGGCTGGTCCAGCGAGGACGTAGCCCGCTATGCGGA GCTATGGGACTACCGGCAGCGTTGGGGTGCAATGAACTTGGAGCGAGAGGACCGCCAGTTCCTAAGAAAGGCTGAAGCCG CTCTGCCAGCAATCGTCACTGGCAAGGCTGCAGCCAAAAAAGCCACTGAGGACAAGTCTTATTACCGCAGGCTGCGCTTC TATCTCCAGGCCATGAATGAAGCAGAGTTAGCTCTCGCACTTGAAGAGAACGCTCGTGGCGCATGGCCGATCCTGCTGGA AGAAGAATTGCGAGCTCTCGACTATTACGAACCAGTTCTCGGCCTGCCAGACACCCTCAAGGCCAAGAAGTTCGATGCTG TACGTGAATCGATTGCTAACCGTGCATCCAAGCTTGCTGATGAGCAGGGCCTTGTAGTGAGTTTTGATTTCCAGGCCCCC CTCAACGCTCTCAAAGCTCAAGAGCCGACAAAATGGCGCCAATTAAGAGAAGAAGACACTGCAGCTGATCAGACCTATCC CATACTCAATGCCTCTGTGGTCGAAGGATTCCGCCAGGAAGTGAGGGCCGAATTGGTTCCCTTGATTCGCGAAACACTGC CATCCTTAGCAAAGACAGATAAAGCTGATCTACCTGACGACTGGAACCGCGCCTGA
Upstream 100 bases:
>100_bases AAAAGCAAAGATGACGCTACCGGAACGAACCAACAAAGGCTCGATGGCACTGATCAGCCCGCCGCCGCTTACGCTGCCGT CCATTACATGAAACCCTCGC
Downstream 100 bases:
>100_bases GACTAAGTTGCTAGAAAGAAGAGACCTTCCTGTTTACGTGTAGTTGACTTCACATCGCTTCGAAACCCTCCAGCTTCATG CCGGCCAGGTAGCTGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRF YLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADEQGLVVSFDFQAP LNALKAQEPTKWRQLREEDTAADQTYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKADLPDDWNRA
Sequences:
>Translated_231_residues MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRF YLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADEQGLVVSFDFQAP LNALKAQEPTKWRQLREEDTAADQTYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKADLPDDWNRA >Mature_230_residues AKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVTGKAAAKKATEDKSYYRRLRFY LQAMNEAELALALEENARGAWPILLEEELRALDYYEPVLGLPDTLKAKKFDAVRESIANRASKLADEQGLVVSFDFQAPL NALKAQEPTKWRQLREEDTAADQTYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKADLPDDWNRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26442; Mature: 26311
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVT CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHC GKAAAKKATEDKSYYRRLRFYLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVL CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC GLPDTLKAKKFDAVRESIANRASKLADEQGLVVSFDFQAPLNALKAQEPTKWRQLREEDT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHH AADQTYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKADLPDDWNRA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AKESTHRADELKELGWSSEDVARYAELWDYRQRWGAMNLEREDRQFLRKAEAALPAIVT CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHC GKAAAKKATEDKSYYRRLRFYLQAMNEAELALALEENARGAWPILLEEELRALDYYEPVL CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC GLPDTLKAKKFDAVRESIANRASKLADEQGLVVSFDFQAPLNALKAQEPTKWRQLREEDT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHH AADQTYPILNASVVEGFRQEVRAELVPLIRETLPSLAKTDKADLPDDWNRA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA