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The map label for this gene is 124022932

Identifier: 124022932

GI number: 124022932

Start: 1065563

End: 1067218

Strand: Reverse

Name: 124022932

Synonym: P9303_12251

Alternate gene names: NA

Gene position: 1067218-1065563 (Counterclockwise)

Preceding gene: 124022934

Following gene: 124022926

Centisome position: 39.78

GC content: 52.6

Gene sequence:

>1656_bases
GTGATTCAGCACCCTTATGAGGTGATCGTGATCGGCTCTGGTGCTACTGGAGGGGTTGCTGCTCTAACCCTTGCAGAAGC
TGGTGTACGTGTGCTCGTGGTAGAAGCTGGGCCAGATTTGTCTGCTCAAAAAGCCCTGGGCTCAGAACCTGGAAACACCC
TTAGACGTTTGGATGGTTTATGTAGCGGCAAGCATCGATCTCAGGCTCAACATCCTGGCTATTGGAAAGCGAATCCGTTG
CTCTACGCGAATGAAAAGGAGAATCCCTATACCTATCCTTCTGAACACCCCTTCATCTGGACCCAGGGTCGTCAGGTGGG
GGGGCGCAGCCTCACTTGGGGTGGAATCACTCTTCGTCTTTCAGATCAGGACTTAAAGGCTTCGCGCAGAGATGGTTATG
GGCCTGAATGGCCACTGCAATACAGCGAGTTAGCTCCTCATTATTCCGCCCTAGAAGAGCGCTTGAAGGTTCATGGTCAT
GTGGATGGGTTGGAACAGTTACCGGATGGCAACTACATCGCCCCATTACCGTTCACAGCTAGTGAACAACAGTTCGCTAG
CGCCGTTGATACTGAACTTGGTTATCCAGTCATTCATTCACGAGGGTTCGGACCTCACCAGCCTTCAGTTGATGGACCTT
GGCCTCGTTCAAGCAGTCCGGGCAGCACCTTACAGATGGCACTTGCCACAGGCAAAGTAGAGATCCTCAGCAACCACAAG
GCTGAGCGGTTGCTGATGCATCCAGATCATGAAGCAGCCCGAGGGGTGCTGGTGATTGATCAGCGCAACGGCAACCGACA
AGAGCTCCATGGTGAGCTTGTGGTGCTTTGTGCATCGACAATTCAGAGTCTTCGACTCCTGCTGAGTTCCGAAGTGAGCC
ATCACAGCGCGGGGTTTACTGACCCCTCGGGCAACCTCGGTTGCTATTTGATGGACCACGTCTCCACCTGTCGTTTCTTT
GCTCTGCCACGTAGCCAAGTGAAGCAGGTGTCTGAGACTGACTCAACGGCGAATGTGCTTTCTGGAGCTGGCAGTTTTTT
TCTTCCTTTCGGTGCTTGCTTAGAGCCTAAAAATCAGTTGAAGTTCTTGCGGGGTTATGGACTCTGGGGAGGGATTGATC
GCTTTGAACCCCCAGATTGGTTGAAACGTAAACCAGACACAGCTACAGGTTTCCTGATTGGGCATGGTGAAGTGTTGCCT
TCACCTCACAACAAAGTGACGCTGTCAAGCACTTTGGATCGCTGGGGTGTTCCTGTGCCACATATCGATTGTCGATGGGG
AGAGAACGAGCAAGCCATGGTTGATCACATGCAAGACACGATCAAGACAGCGATCCAGTCAGCTGGGGGAACAATGTTGC
CGCTCAAGGAGCTGATTAATTTGATGTTTCTCGAACCCCTTCTCGATGGTGCGCTAGCTCTCAGTGAAACGTCTCCACCG
CCGGGGTATTACATCCATGAAGTTGGCGGTGCTGCGATGGGAGAACGTGAAGATTGCAGTGTGGTGGATCGTTGGAACCG
TCTTTGGCGATGTCCAAATGTGCTTGTTGTGGATGGAGCGTGTTGGCCAACATCCGCCTGGCAGAGTCCCACTCTGACAA
TGATGGCGATTACAAGAAGGGCTTGTCTACAAGCCCTTAAGCCTCGGCGTGGCTGA

Upstream 100 bases:

>100_bases
TCCATTCTCCAAGGCATCAAGTCAACGCACAGGGCTATGAGATCAAGATGGTATCTATGCACGTGAGGGGCGAAACTATC
TTGATGTTGTCTATGCAAGC

Downstream 100 bases:

>100_bases
AAAGGTCATTGAGATACCGCTCAGTAACGGCTCGATCCCCGCAGCCGTTTTGAAAGAGGAAATGGGCGATGGCTGAACTC
ATCACGCGGTATTGGTCCCA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Gluconate 2-Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Dehydrogenase Subunit-Like Protein; Oxidoreductase-Like Protein; Fad Dependent Oxidoreductase; Choline Dehydrogenase And Flavoproteins-Like Protein; Dehydrogluconate Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein; Gluconate 2-Dehydrogenase Alpha Chain

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGRQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIAPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQRNGNRQELHGELVVLCASTIQSLRLLLSSEVSHHSAGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPDTATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQDTIKTAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGEREDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLQALKPRRG

Sequences:

>Translated_551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGRQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIAPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQRNGNRQELHGELVVLCASTIQSLRLLLSSEVSHHSAGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPDTATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQDTIKTAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGEREDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLQALKPRRG
>Mature_551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGRQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIAPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQRNGNRQELHGELVVLCASTIQSLRLLLSSEVSHHSAGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPDTATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQDTIKTAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGEREDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLQALKPRRG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60298; Mature: 60298

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGL
CCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
CSGKHRSQAQHPGYWKANPLLYANEKENPYTYPSEHPFIWTQGRQVGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGHVDGLEQLPDGNYIAPLPFTA
CCCHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCC
SEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
AERLLMHPDHEAARGVLVIDQRNGNRQELHGELVVLCASTIQSLRLLLSSEVSHHSAGFT
CCEEEECCCHHHHCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DPSGNLGCYLMDHVSTCRFFALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQL
CCCCCCCEEEEHHHCCHHEEECCHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHH
KFLRGYGLWGGIDRFEPPDWLKRKPDTATGFLIGHGEVLPSPHNKVTLSSTLDRWGVPVP
HHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCCCCC
HIDCRWGENEQAMVDHMQDTIKTAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
PGYYIHEVGGAAMGEREDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRR
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
ACLQALKPRRG
HHHHHHCCCCC
>Mature Secondary Structure
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGL
CCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
CSGKHRSQAQHPGYWKANPLLYANEKENPYTYPSEHPFIWTQGRQVGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGHVDGLEQLPDGNYIAPLPFTA
CCCHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCC
SEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
AERLLMHPDHEAARGVLVIDQRNGNRQELHGELVVLCASTIQSLRLLLSSEVSHHSAGFT
CCEEEECCCHHHHCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DPSGNLGCYLMDHVSTCRFFALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQL
CCCCCCCEEEEHHHCCHHEEECCHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHH
KFLRGYGLWGGIDRFEPPDWLKRKPDTATGFLIGHGEVLPSPHNKVTLSSTLDRWGVPVP
HHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHCCCCC
HIDCRWGENEQAMVDHMQDTIKTAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
PGYYIHEVGGAAMGEREDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRR
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
ACLQALKPRRG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA