| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022926
Identifier: 124022926
GI number: 124022926
Start: 1062406
End: 1063590
Strand: Reverse
Name: 124022926
Synonym: P9303_12191
Alternate gene names: NA
Gene position: 1063590-1062406 (Counterclockwise)
Preceding gene: 124022932
Following gene: 124022925
Centisome position: 39.65
GC content: 52.66
Gene sequence:
>1185_bases ATGCGCTCGCTACAACTCAAACGCAAACCCTTAATGGTTTGCAGCGGAGGCACAACCAGTCGCTGTGCAGCTGAAGGACA CTGGACCCTGGATCTGCGCCAAAGCTGTCGCCAGATCCATTTCGATCCCAGCACCCAACACGTGGAGATTGGGGCTGGTC AGACAATGGAGAGTCTTCTCAGGGAACTCGCCAAGCACGGAAGAAGTTTTCCCACAGGGCTATCAGGACTGCCAGGCCTC GGTTACATCCTCACTGGAGGCATCAGCCCTTTGAGTCGCAGTCAAGGATTAGCAATTGATCAAATCCTTGAGATCAAAGG TGTATGGGGCGATGGAGAAAGCTTTGTTCGCTCCAAGCCGGAAGCTGCTTGCTGCTCTGAAGATCAATTGGCTTGGCGTG GTCTCTGCGGAGCAGCGCCTTTTCTGGCTGTGATCACAGACCTCAAGCTTCAGACACATCTGCTGCAACCGCTGCGTATC TGGCAATCAAGTTTGACGTTTGAACAGCTGTTGGAGCTTATCCATCAGGCTGAAAGCTGGCCTGATTCGTTAAGCCTGCA GTGGATCTGGGGGGATGAAATCCACGCTTACGGAGTGATCCTTGCGAACGATGCTGTCGCTGTTGCGACATTCAATCAGC TGCAAAAAACAACTCTCTGCACAAACGTTGTTGAAATTTACGATGTTGCTGGCATACATGAATTGCCACCATTTGCATTG CCTGTTGTTTCAAACACAGCGATTGGGCGTTGCCACTCTGAAGTCGTTGCGTTGCTTGGCCCTGCTTGGGGGTCTGCCTG TCAGGGAGTGATCACGGCCCTTGCCGAACTGATGGCAGAACGCCCAGATCCAAGGTGTTACTTGGCTGTTCAACAACTCG GCGGAGTCGCCAGTCGACAGCGTAAGGATGTCAGTTCTTTGATTCACCGTGAGGCGATCTGGAAACCATGGATCACGGCA GCCTGGCCGGCTGGAGATAGCCATATCAGAGCGCTAAGTCTCAACTGGCTAGAGAAGGTATGGGCAACGCTTGAGCCTTA TTGCGAAGGTGTTCATCTGGCTCAGATGCATCCGCATCTGCCATGGCATCAGCGGGAGCTGAAAGCAGCATTCGGCGAAT GGTTACCAGGTCTTCAAGAACTTAAGGCTCGTCATGACCCAAACGGTATTTTGCCTTCGCTTTGA
Upstream 100 bases:
>100_bases GGCCGCCATTCATCGTCGCCTCCATGTTCCAAACGCACTTGCAGAGGATGCTTGCATCGCAGGAGTCTTCAATCCCAGAG CGGATGACATTGCTGCGCTG
Downstream 100 bases:
>100_bases GATAAGGTCTGCCGTCAAAGCCAGCCTTTTTAATGATTAACCGGTCAGAACCATCGTTGATCAAACAATGGTTAGGCAAC CCTCCAAAAGATCTCCTCTC
Product: FAD linked oxidase N-terminal
Products: NA
Alternate protein names: FAD Linked Oxidase N-Terminal Domain Protein; Oxidoreductase; FAD/FMN-Containing Dehydrogenase; Oxidase
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTGLSGLPGL GYILTGGISPLSRSQGLAIDQILEIKGVWGDGESFVRSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRI WQSSLTFEQLLELIHQAESWPDSLSLQWIWGDEIHAYGVILANDAVAVATFNQLQKTTLCTNVVEIYDVAGIHELPPFAL PVVSNTAIGRCHSEVVALLGPAWGSACQGVITALAELMAERPDPRCYLAVQQLGGVASRQRKDVSSLIHREAIWKPWITA AWPAGDSHIRALSLNWLEKVWATLEPYCEGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPSL
Sequences:
>Translated_394_residues MRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTGLSGLPGL GYILTGGISPLSRSQGLAIDQILEIKGVWGDGESFVRSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRI WQSSLTFEQLLELIHQAESWPDSLSLQWIWGDEIHAYGVILANDAVAVATFNQLQKTTLCTNVVEIYDVAGIHELPPFAL PVVSNTAIGRCHSEVVALLGPAWGSACQGVITALAELMAERPDPRCYLAVQQLGGVASRQRKDVSSLIHREAIWKPWITA AWPAGDSHIRALSLNWLEKVWATLEPYCEGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPSL >Mature_394_residues MRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTGLSGLPGL GYILTGGISPLSRSQGLAIDQILEIKGVWGDGESFVRSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRI WQSSLTFEQLLELIHQAESWPDSLSLQWIWGDEIHAYGVILANDAVAVATFNQLQKTTLCTNVVEIYDVAGIHELPPFAL PVVSNTAIGRCHSEVVALLGPAWGSACQGVITALAELMAERPDPRCYLAVQQLGGVASRQRKDVSSLIHREAIWKPWITA AWPAGDSHIRALSLNWLEKVWATLEPYCEGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPSL
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43380; Mature: 43380
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLL CCCCCCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEECCCCHHHHHHH RELAKHGRSFPTGLSGLPGLGYILTGGISPLSRSQGLAIDQILEIKGVWGDGESFVRSKP HHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCC EAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRIWQSSLTFEQLLELIHQAESW CHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PDSLSLQWIWGDEIHAYGVILANDAVAVATFNQLQKTTLCTNVVEIYDVAGIHELPPFAL CCCCEEEEEECCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE PVVSNTAIGRCHSEVVALLGPAWGSACQGVITALAELMAERPDPRCYLAVQQLGGVASRQ HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCHHHHH RKDVSSLIHREAIWKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCEGVHLAQMHPHL HHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCC PWHQRELKAAFGEWLPGLQELKARHDPNGILPSL CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLL CCCCCCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEECCCCHHHHHHH RELAKHGRSFPTGLSGLPGLGYILTGGISPLSRSQGLAIDQILEIKGVWGDGESFVRSKP HHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCC EAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRIWQSSLTFEQLLELIHQAESW CHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PDSLSLQWIWGDEIHAYGVILANDAVAVATFNQLQKTTLCTNVVEIYDVAGIHELPPFAL CCCCEEEEEECCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE PVVSNTAIGRCHSEVVALLGPAWGSACQGVITALAELMAERPDPRCYLAVQQLGGVASRQ HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCHHHHH RKDVSSLIHREAIWKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCEGVHLAQMHPHL HHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCC PWHQRELKAAFGEWLPGLQELKARHDPNGILPSL CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA