| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is wprA [H]
Identifier: 124022879
GI number: 124022879
Start: 1030516
End: 1032003
Strand: Reverse
Name: wprA [H]
Synonym: P9303_11721
Alternate gene names: 124022879
Gene position: 1032003-1030516 (Counterclockwise)
Preceding gene: 124022880
Following gene: 124022878
Centisome position: 38.47
GC content: 42.27
Gene sequence:
>1488_bases ATGCAGCCGTTGACTAAAGATCTAGCATCTGTGCTTACAGGAGCAGTAACAAGTACAACATCAAGCTCATGGCAAAAAAG AGAACCTTATTACAACTATCAGTGGAGCTTATTTAACAACGGACAATACAATGGCTCCAGGGTTGATGCTGATATTGATG CCGATGCTGTTTTTTCTAAAACTCCCTATCCTTCATTCTTGATGGATCCAGCGGCAGTTGGTCAAAATACAATCGCTATT CTTGATACAGGCGTCAACTGGAATCATGTTGATTTAAACGAACGGCTCAATATGAATGCAAACTTTATTTCTAGAGAGCC TATTGACGGGATTGATAATGATGGCAATGGCTACGTTGATGACCCATTGGGATGGAACTTTATGAACAATGGTAATTCAC CATTTGATGATCAAGGCCATGGTTCCCACGTGTCTGGATTAGCAGCTGCATCTGCTAATGCCCAAGGAATCGTGGGCACA AACCCTAATGCATCCATTATCCCGGTTAAAGTCTTAGGGCCTAATGGGGGGACAACCCCAGGGGTTGTTGCTGGAATTAA TTATGCAGTTAGCAGAGGAGCAAAAATTATCAATATGAGCTTAGGCGGCCCTGGATATTCTCAAGCAATGTATGCGGCAA TCGCTAATGCTAATAATGCAGGAGCTTTGGTGGTCGCAGCTGCAGGCAATGATTTTGTTAATACCGATTATAATCCCTCT TATCCAGCAGCATACAACCTACCTAATATAATATCTGTAGCTGCCTCTGATTACACTGACTGGTTTGCCAACTTTTCAAA CTATGGTAAAGCAACTGTTGACTTATTGGCTCCAGGTAAATTAATGCTAAGTGATTCTCATATTGGCAGTACAGGTCTTG TTGAAAAAAGTGGAACTTCGATGGCTGCTCCAATCGTAGCTGGCGCAGTCAGTTATTTTTGGTCGCGAAATCCAACCTGG ACGGCATTACAAGTAAAGGATCGATTACTTAACATCGGCGTTGACAAGATCCCAGGTGCAGAGAATTATACTGTTTCAGG AGGAAGATTGAACATGGCCCATTTGATGGGCTGGCCTGCAACAGATGTATACACAAGCTCAGGACAAGATGCTGATACTC TTGCCGGGATGGATCTAAGCACTAATGCAGACCCTGTTATTAACTATGTTCCATTCATTGACAGTAAGAATCTAAGCACA TTCAACGTTGATGAAGTTACAGATGCTGTGATTGGTATTGTTGATGGAGATGCATTATCAGATCGTATAGCACGTATGAA AGAATTTCTAACTAGCACAAATATTGGTGAGGTCTATGCTGATCAATTTGATGATTTTGAAATCCTAGATAGCTTAGGCA CCTCGCTAACAACCATTGATTTCAAAGACCACATCTCAAATGAGGGTAAGCGTAAACTAATGGGTGAGTTCATCGCGCGC GGGTGGTTTGAAGGCTTTGAAATGAACAGCGAAGTGTCACTGTTCTAG
Upstream 100 bases:
>100_bases TATAAGAGTTTGGACGTTTAATAAAAACTGGAAATTTAAAAGCAAAAGCGGAAAGATATCCTCTTCGTCAAGAGAGTTTT CAGCCATGGAGAACGGCTTT
Downstream 100 bases:
>100_bases AAATTTACTGCCTCCATTTATTTAGCTCAGCAATGGTTTCTAGCTTGGCACTAACAGGAAATCAAAGTTTATTGCCTTTG CGACTATTGAGTCGATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: CWBP23; CWBP52 [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MQPLTKDLASVLTGAVTSTTSSSWQKREPYYNYQWSLFNNGQYNGSRVDADIDADAVFSKTPYPSFLMDPAAVGQNTIAI LDTGVNWNHVDLNERLNMNANFISREPIDGIDNDGNGYVDDPLGWNFMNNGNSPFDDQGHGSHVSGLAAASANAQGIVGT NPNASIIPVKVLGPNGGTTPGVVAGINYAVSRGAKIINMSLGGPGYSQAMYAAIANANNAGALVVAAAGNDFVNTDYNPS YPAAYNLPNIISVAASDYTDWFANFSNYGKATVDLLAPGKLMLSDSHIGSTGLVEKSGTSMAAPIVAGAVSYFWSRNPTW TALQVKDRLLNIGVDKIPGAENYTVSGGRLNMAHLMGWPATDVYTSSGQDADTLAGMDLSTNADPVINYVPFIDSKNLST FNVDEVTDAVIGIVDGDALSDRIARMKEFLTSTNIGEVYADQFDDFEILDSLGTSLTTIDFKDHISNEGKRKLMGEFIAR GWFEGFEMNSEVSLF
Sequences:
>Translated_495_residues MQPLTKDLASVLTGAVTSTTSSSWQKREPYYNYQWSLFNNGQYNGSRVDADIDADAVFSKTPYPSFLMDPAAVGQNTIAI LDTGVNWNHVDLNERLNMNANFISREPIDGIDNDGNGYVDDPLGWNFMNNGNSPFDDQGHGSHVSGLAAASANAQGIVGT NPNASIIPVKVLGPNGGTTPGVVAGINYAVSRGAKIINMSLGGPGYSQAMYAAIANANNAGALVVAAAGNDFVNTDYNPS YPAAYNLPNIISVAASDYTDWFANFSNYGKATVDLLAPGKLMLSDSHIGSTGLVEKSGTSMAAPIVAGAVSYFWSRNPTW TALQVKDRLLNIGVDKIPGAENYTVSGGRLNMAHLMGWPATDVYTSSGQDADTLAGMDLSTNADPVINYVPFIDSKNLST FNVDEVTDAVIGIVDGDALSDRIARMKEFLTSTNIGEVYADQFDDFEILDSLGTSLTTIDFKDHISNEGKRKLMGEFIAR GWFEGFEMNSEVSLF >Mature_495_residues MQPLTKDLASVLTGAVTSTTSSSWQKREPYYNYQWSLFNNGQYNGSRVDADIDADAVFSKTPYPSFLMDPAAVGQNTIAI LDTGVNWNHVDLNERLNMNANFISREPIDGIDNDGNGYVDDPLGWNFMNNGNSPFDDQGHGSHVSGLAAASANAQGIVGT NPNASIIPVKVLGPNGGTTPGVVAGINYAVSRGAKIINMSLGGPGYSQAMYAAIANANNAGALVVAAAGNDFVNTDYNPS YPAAYNLPNIISVAASDYTDWFANFSNYGKATVDLLAPGKLMLSDSHIGSTGLVEKSGTSMAAPIVAGAVSYFWSRNPTW TALQVKDRLLNIGVDKIPGAENYTVSGGRLNMAHLMGWPATDVYTSSGQDADTLAGMDLSTNADPVINYVPFIDSKNLST FNVDEVTDAVIGIVDGDALSDRIARMKEFLTSTNIGEVYADQFDDFEILDSLGTSLTTIDFKDHISNEGKRKLMGEFIAR GWFEGFEMNSEVSLF
Specific function: CWBP52 is a serine-type protease that could be involved in proteoglycan peptide bridges [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted, cell wall. Note=Released into the medium [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI31317307, Length=273, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=301, Percent_Identity=33.8870431893688, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=267, Percent_Identity=30.7116104868914, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324576, Length=269, Percent_Identity=31.9702602230483, Blast_Score=83, Evalue=8e-17, Organism=Drosophila melanogaster, GI45550681, Length=250, Percent_Identity=28.4, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 52865; Mature: 52865
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLTKDLASVLTGAVTSTTSSSWQKREPYYNYQWSLFNNGQYNGSRVDADIDADAVFSK CCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCCEECCCCCCCCEECC TPYPSFLMDPAAVGQNTIAILDTGVNWNHVDLNERLNMNANFISREPIDGIDNDGNGYVD CCCCHHHCCHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCEEEC DPLGWNFMNNGNSPFDDQGHGSHVSGLAAASANAQGIVGTNPNASIIPVKVLGPNGGTTP CCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCC GVVAGINYAVSRGAKIINMSLGGPGYSQAMYAAIANANNAGALVVAAAGNDFVNTDYNPS HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC YPAAYNLPNIISVAASDYTDWFANFSNYGKATVDLLAPGKLMLSDSHIGSTGLVEKSGTS CCCCCCCCCCEEEHHCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEECCCCC MAAPIVAGAVSYFWSRNPTWTALQVKDRLLNIGVDKIPGAENYTVSGGRLNMAHLMGWPA HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCEEECCCEEEHHHHCCCCC TDVYTSSGQDADTLAGMDLSTNADPVINYVPFIDSKNLSTFNVDEVTDAVIGIVDGDALS CCCCCCCCCCCHHEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHHHHEEEEECCHHHH DRIARMKEFLTSTNIGEVYADQFDDFEILDSLGTSLTTIDFKDHISNEGKRKLMGEFIAR HHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCCEEEEECHHHHCCCHHHHHHHHHHHH GWFEGFEMNSEVSLF HHHHCCCCCCCEECC >Mature Secondary Structure MQPLTKDLASVLTGAVTSTTSSSWQKREPYYNYQWSLFNNGQYNGSRVDADIDADAVFSK CCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCCEECCCCCCCCEECC TPYPSFLMDPAAVGQNTIAILDTGVNWNHVDLNERLNMNANFISREPIDGIDNDGNGYVD CCCCHHHCCHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCEEEC DPLGWNFMNNGNSPFDDQGHGSHVSGLAAASANAQGIVGTNPNASIIPVKVLGPNGGTTP CCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCC GVVAGINYAVSRGAKIINMSLGGPGYSQAMYAAIANANNAGALVVAAAGNDFVNTDYNPS HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC YPAAYNLPNIISVAASDYTDWFANFSNYGKATVDLLAPGKLMLSDSHIGSTGLVEKSGTS CCCCCCCCCCEEEHHCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEECCCCC MAAPIVAGAVSYFWSRNPTWTALQVKDRLLNIGVDKIPGAENYTVSGGRLNMAHLMGWPA HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCEEECCCEEEHHHHCCCCC TDVYTSSGQDADTLAGMDLSTNADPVINYVPFIDSKNLSTFNVDEVTDAVIGIVDGDALS CCCCCCCCCCCHHEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHHHHEEEEECCHHHH DRIARMKEFLTSTNIGEVYADQFDDFEILDSLGTSLTTIDFKDHISNEGKRKLMGEFIAR HHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHCCCCEEEEECHHHHCCCHHHHHHHHHHHH GWFEGFEMNSEVSLF HHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9004506; 9353931; 9384377; 10658653 [H]