| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022878
Identifier: 124022878
GI number: 124022878
Start: 1029874
End: 1030041
Strand: Reverse
Name: 124022878
Synonym: P9303_11711
Alternate gene names: NA
Gene position: 1030041-1029874 (Counterclockwise)
Preceding gene: 124022879
Following gene: 124022877
Centisome position: 38.4
GC content: 47.02
Gene sequence:
>168_bases GTGGCATTTGCACATCGCCTTCAGATACGTCGTCATCGGCTAGCTTTAGGCTGTCGAATTTGGCAATTATTTATCCAGGC TCCCATACATACTCTCAAGTCCAGCAGTGAACCTGCCAAGGTTGAGATCTTTAGAACTGAATTGCTTTGCCATGGCTGCA TGAGCTAG
Upstream 100 bases:
>100_bases GATAGTTAATAGGCTTTCAGACAGGGCATAGCTCAAGAAGAAGACGGACGGCAGACTGTCAGACGGAGTGAAATCTTTAG CTTTCTGAGTACTTGATGCC
Downstream 100 bases:
>100_bases TAGCCCACTCTCTTAAGCTCTTTTTATGATTTTCTGCCAGATTGGCGAAAGAACGCTATTAGGCAATAAAACTAAATCGG GTCCAAAGAAACTACAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAFAHRLQIRRHRLALGCRIWQLFIQAPIHTLKSSSEPAKVEIFRTELLCHGCMS
Sequences:
>Translated_55_residues MAFAHRLQIRRHRLALGCRIWQLFIQAPIHTLKSSSEPAKVEIFRTELLCHGCMS >Mature_54_residues AFAHRLQIRRHRLALGCRIWQLFIQAPIHTLKSSSEPAKVEIFRTELLCHGCMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6403; Mature: 6272
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAHRLQIRRHRLALGCRIWQLFIQAPIHTLKSSSEPAKVEIFRTELLCHGCMS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AFAHRLQIRRHRLALGCRIWQLFIQAPIHTLKSSSEPAKVEIFRTELLCHGCMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA