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The map label for this gene is crp [H]

Identifier: 124022814

GI number: 124022814

Start: 989722

End: 990423

Strand: Reverse

Name: crp [H]

Synonym: P9303_11071

Alternate gene names: 124022814

Gene position: 990423-989722 (Counterclockwise)

Preceding gene: 124022815

Following gene: 124022811

Centisome position: 36.92

GC content: 36.04

Gene sequence:

>702_bases
ATGATGACTTATTCGACCTACAAGGCCAAATCTATCAAGCAGAAGGAGTTATCTGATCTCGTACAATTAAATGACCATGG
TAGAAAAATAGTCAATTATTCTGCAAAAAGCCATATACCAATCAATACAAATAATTTTTGGCTTGTAATAACAGGAGTTG
TTAAATTAATCGCCAAATCACCTAATGGAGGTGACATTGTCGTCGGCATAGTCGGGAAAAACCAAACTATAGGAGCACAA
CAAATAAACCAAACAACAACCAGTGCGGTTGCGATGACAGATACAGAGTTGCTCTATGTGTCAATGGCAGAAATTGAGAA
TTGCCGTGACTTGGCACTAGTTATTATAGAATCATTGTCAACAAACTGCAGGCAATCTCAAGAATTATCCTATTTATTGG
GATTGCATAGAGTGAAGGAACGTGTACAGGCATTTCTTCAATTTCTTGCTCATGAATGCGGAGAATTATGCTCTGATGGG
CAAAAGCTAAATATAAAGATTACTCACCAGGAAATTGCAAATACATTAAGCACAACACGTGTAACTATATCGAATACGAT
TAGCATCTTAAAAGATGAAGGATGGTTATTGGTAAACCCTAAAAGACTATTTATTATAAGCTCAACAAAAGAAAGTGATG
TTTTAAGATTAGAATTTGATGATAAGTACCGGGGAGGGCTCCAGAGCCTAAAAACTTTTTAA

Upstream 100 bases:

>100_bases
TGAAGCATACAAAATAAAGCAGAAGACACGAATGTTACCAAGAGGTTTGTCTTGGCAATACTCTATCTAACTATTAAATC
CTTTGCCTTTGCTTTAGTCA

Downstream 100 bases:

>100_bases
TCTAATTTACTCTCCTCTCTCTCGTACAACCTTCTTGTTAGATATTGTTTATTAGCGCTCGTTAAGAATGTTTTGGCTCT
GGCAACCTTAAGCTGCTTAG

Product: Crp/Fnr family transcriptional regulator

Products: NA

Alternate protein names: DNA-binding protein VF1; Nitrogen-responsive regulatory protein [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MMTYSTYKAKSIKQKELSDLVQLNDHGRKIVNYSAKSHIPINTNNFWLVITGVVKLIAKSPNGGDIVVGIVGKNQTIGAQ
QINQTTTSAVAMTDTELLYVSMAEIENCRDLALVIIESLSTNCRQSQELSYLLGLHRVKERVQAFLQFLAHECGELCSDG
QKLNIKITHQEIANTLSTTRVTISNTISILKDEGWLLVNPKRLFIISSTKESDVLRLEFDDKYRGGLQSLKTF

Sequences:

>Translated_233_residues
MMTYSTYKAKSIKQKELSDLVQLNDHGRKIVNYSAKSHIPINTNNFWLVITGVVKLIAKSPNGGDIVVGIVGKNQTIGAQ
QINQTTTSAVAMTDTELLYVSMAEIENCRDLALVIIESLSTNCRQSQELSYLLGLHRVKERVQAFLQFLAHECGELCSDG
QKLNIKITHQEIANTLSTTRVTISNTISILKDEGWLLVNPKRLFIISSTKESDVLRLEFDDKYRGGLQSLKTF
>Mature_233_residues
MMTYSTYKAKSIKQKELSDLVQLNDHGRKIVNYSAKSHIPINTNNFWLVITGVVKLIAKSPNGGDIVVGIVGKNQTIGAQ
QINQTTTSAVAMTDTELLYVSMAEIENCRDLALVIIESLSTNCRQSQELSYLLGLHRVKERVQAFLQFLAHECGELCSDG
QKLNIKITHQEIANTLSTTRVTISNTISILKDEGWLLVNPKRLFIISSTKESDVLRLEFDDKYRGGLQSLKTF

Specific function: Has affinity for the xisA upstream region. Binds to a 66 bp region containing three repeats of the consensus recognition sequence 5'-ACATT-3' [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR022299
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 26048; Mature: 26048

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTYSTYKAKSIKQKELSDLVQLNDHGRKIVNYSAKSHIPINTNNFWLVITGVVKLIAKS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEHHHHHHHHHCC
PNGGDIVVGIVGKNQTIGAQQINQTTTSAVAMTDTELLYVSMAEIENCRDLALVIIESLS
CCCCEEEEEEECCCCCCCHHHHHHHHHHEEEEECCEEEEEEHHHHHCHHHHHHHHHHHHC
TNCRQSQELSYLLGLHRVKERVQAFLQFLAHECGELCSDGQKLNIKITHQEIANTLSTTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCE
VTISNTISILKDEGWLLVNPKRLFIISSTKESDVLRLEFDDKYRGGLQSLKTF
EEEHHHEEEEECCCEEEECCCEEEEEECCCCCCEEEEEECCHHHCCHHHHCCC
>Mature Secondary Structure
MMTYSTYKAKSIKQKELSDLVQLNDHGRKIVNYSAKSHIPINTNNFWLVITGVVKLIAKS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEHHHHHHHHHCC
PNGGDIVVGIVGKNQTIGAQQINQTTTSAVAMTDTELLYVSMAEIENCRDLALVIIESLS
CCCCEEEEEEECCCCCCCHHHHHHHHHHEEEEECCEEEEEEHHHHHCHHHHHHHHHHHHC
TNCRQSQELSYLLGLHRVKERVQAFLQFLAHECGELCSDGQKLNIKITHQEIANTLSTTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCE
VTISNTISILKDEGWLLVNPKRLFIISSTKESDVLRLEFDDKYRGGLQSLKTF
EEEHHHEEEEECCCEEEECCCEEEEEECCCCCCEEEEEECCHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11114927 [H]