| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022792
Identifier: 124022792
GI number: 124022792
Start: 971357
End: 971935
Strand: Reverse
Name: 124022792
Synonym: P9303_10851
Alternate gene names: NA
Gene position: 971935-971357 (Counterclockwise)
Preceding gene: 124022793
Following gene: 124022791
Centisome position: 36.23
GC content: 47.5
Gene sequence:
>579_bases ATGAAAATTCACATCATCGACCTTCGTCAATCATCAGGTGATCAGAGTTGTCTAGACAATAGTTTCGACAATATTAAGCG TAGGCTATTCCTACGACGCTCAGCATATCAACAACTGGCAAAGGAGGAGGGCTTTAGCTACATAAGCTGGAATTGCCCTT ATTGCGGCAGTTCCAAGCATGGAAGGCCTACGACTAAAACAGCAAGTGTTAGCTCAAGTAGTTATGGGAACTGGGCGGTT ATTGCCTTTGCACCACGTACGATGGCAATCGGAATCGACATCACACCAAAAAGGCCTCCTTCAGAGGCTGAAGGTATTGC AGAAGCCTTCTTCACCCCTGGAGAACTTTGCCAACGTCCAACTGGTGGTTGGCAGGAAGGGGTTGGGTTTTCGGAAATCT GGGCTGCTAAAGAGGCCCTTGGAAAAGCGCAAGGCATTGGATTGGCAATAGATCATCCAAACCACCCAGGAGGCGCACTT GATACATCAACACATGCTGAGCTATTGAGCAGATTTACTGGCCAGCATGGCTTACCACCTCATCTAACTTGCAGAGCGGC AGTTATAAGTACTCAATAA
Upstream 100 bases:
>100_bases AAGCTGTTCTGAACAGCCTAGGAGTTTCCATAGATTCAGACCCTAGGATGCTTGCCAAACTCTATGTTCCTTACCTAATT GAGCAAGGATTCCTAATACC
Downstream 100 bases:
>100_bases TTACGTTTGTTTAGGTTGATAAATTAACCCTGGAGACGATAGGTTGTCGCCATTTTATTGAGAAAAGTTGGGGAATAGCT AGGGATATGTGTCAATCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ
Sequences:
>Translated_192_residues MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ >Mature_192_residues MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20815; Mature: 20815
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKH CEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC GRPTTKTASVSSSSYGNWAVIAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRP CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCC TGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGALDTSTHAELLSRFTGQHGLPP CCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC HLTCRAAVISTQ CCEEEEEEEECC >Mature Secondary Structure MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKH CEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC GRPTTKTASVSSSSYGNWAVIAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRP CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCC TGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGALDTSTHAELLSRFTGQHGLPP CCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC HLTCRAAVISTQ CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA