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The map label for this gene is petH [H]

Identifier: 124022650

GI number: 124022650

Start: 854749

End: 855849

Strand: Reverse

Name: petH [H]

Synonym: P9303_09411

Alternate gene names: 124022650

Gene position: 855849-854749 (Counterclockwise)

Preceding gene: 124022652

Following gene: 124022649

Centisome position: 31.9

GC content: 50.23

Gene sequence:

>1101_bases
ATGGCTTTCAACCAAACTGAAGTAGTTCTCGGTGGAATCGCCCATATCCCTCTTGTTATTGGCGCTTTCTACGTTGTCAA
AGCACTCTTTTACCGTGGCCAAGACGGGAAGTTAGTTCCTTTTAGCTTTTCTTACCGCCAAGCGGCTCAAATAAAATCAT
CCTCGACAACCACCTCAACCGAAAAGCCTGATACCAAAAGCCCACCCGCTCAAAAAGCAATACCTATTAACCTTTACAAG
CCCAAAGCGCCCTTCGAAGGGACGGTTCTAGAGAACTACAGCCTTGTCAAAGAAGGTGCTGTAGGCAGGGTCAATCACAT
CACTTTCAACCTGGCCGGGAGTGACCCCCATCTCAGTTATGTAGAAGGCCAGAGCATTGGCATCATTCCTGCTGGTACGG
ACGCCAATGGCAAGCCCCATAAGCTCCGCCTTTATTCAATTGCCAGCACCCGCCATGGGGACAACCTAGAGGGCAAAACA
GTCTCGTTATGTGTTCGTCAGCTCCAATACGAGCTAGACGGCAAAACGATTAACGGTGTCTGCTCCAGTTATCTCTGCGA
CATCAACCCTGGAGCCAAAACGAAGATCACCGGACCGGTAGGCAAGGAAATGCTTCTACCAGATGATGAAGAGGCCAACG
TCATCATGTTGGCCACCGGAACTGGCATCGCTCCAATGCGTGCCTATCTTCGCCGCATGTTTGAGCCTACAGAGCGCTCC
AAGAATGGCTGGAAATTCCGTGGCAAAGCCTGGCTATTCATGGGAGCTCCCTACACGGCCAACCTTCTTTATGACGATGA
CTTTGAGCGTTATCTCAGAGAATTTCCCGACAACTTCATCTATACCAAGGCCATCAGCCGCGAACAGCAGAATTCTAAAG
GCGGCCGGATGTATATCCAAGACAGGGTGATGGAGTATTCCGATCAGATCTTCAAAATGATTGAGAACCCCAAAACCCAT
GTTTATATGTGCGGCCTTAAGGGCATGGAGCCTGGCATCGACGAAGCAATGACCGCAGCGGCAACCGCTAAAGGGATCGA
TTGGTCAGAGTTACGACCCCAGCTGAAGAAAGCTCATCGCTGGCACGTTGAGACCTATTAA

Upstream 100 bases:

>100_bases
ACTGAGCTGTGCCAATCGCCAAACGTAACCCGAAAACGCCGATGAGTATGCATACCACCACACCTTCTAAGGTATTCTCG
CCGTCACGCTCTTGCTCTTG

Downstream 100 bases:

>100_bases
TCCTGCACTCTCCAGGTTTTTAACCTGATAAAAAGACCCGCCCACTTGGGCGGGTCTTTTTATGCATCCTCAAATTTTTT
TGGGCATACGACGACAAAGC

Product: ferredoxin-NADP oxidoreductase (FNR)

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MAFNQTEVVLGGIAHIPLVIGAFYVVKALFYRGQDGKLVPFSFSYRQAAQIKSSSTTTSTEKPDTKSPPAQKAIPINLYK
PKAPFEGTVLENYSLVKEGAVGRVNHITFNLAGSDPHLSYVEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDNLEGKT
VSLCVRQLQYELDGKTINGVCSSYLCDINPGAKTKITGPVGKEMLLPDDEEANVIMLATGTGIAPMRAYLRRMFEPTERS
KNGWKFRGKAWLFMGAPYTANLLYDDDFERYLREFPDNFIYTKAISREQQNSKGGRMYIQDRVMEYSDQIFKMIENPKTH
VYMCGLKGMEPGIDEAMTAAATAKGIDWSELRPQLKKAHRWHVETY

Sequences:

>Translated_366_residues
MAFNQTEVVLGGIAHIPLVIGAFYVVKALFYRGQDGKLVPFSFSYRQAAQIKSSSTTTSTEKPDTKSPPAQKAIPINLYK
PKAPFEGTVLENYSLVKEGAVGRVNHITFNLAGSDPHLSYVEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDNLEGKT
VSLCVRQLQYELDGKTINGVCSSYLCDINPGAKTKITGPVGKEMLLPDDEEANVIMLATGTGIAPMRAYLRRMFEPTERS
KNGWKFRGKAWLFMGAPYTANLLYDDDFERYLREFPDNFIYTKAISREQQNSKGGRMYIQDRVMEYSDQIFKMIENPKTH
VYMCGLKGMEPGIDEAMTAAATAKGIDWSELRPQLKKAHRWHVETY
>Mature_365_residues
AFNQTEVVLGGIAHIPLVIGAFYVVKALFYRGQDGKLVPFSFSYRQAAQIKSSSTTTSTEKPDTKSPPAQKAIPINLYKP
KAPFEGTVLENYSLVKEGAVGRVNHITFNLAGSDPHLSYVEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDNLEGKTV
SLCVRQLQYELDGKTINGVCSSYLCDINPGAKTKITGPVGKEMLLPDDEEANVIMLATGTGIAPMRAYLRRMFEPTERSK
NGWKFRGKAWLFMGAPYTANLLYDDDFERYLREFPDNFIYTKAISREQQNSKGGRMYIQDRVMEYSDQIFKMIENPKTHV
YMCGLKGMEPGIDEAMTAAATAKGIDWSELRPQLKKAHRWHVETY

Specific function: Essential for growth [H]

COG id: COG0369

COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789123, Length=206, Percent_Identity=31.0679611650485, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17554134, Length=189, Percent_Identity=33.8624338624339, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6321832, Length=168, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321143, Length=240, Percent_Identity=28.3333333333333, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012146
- InterPro:   IPR015701
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR008213
- InterPro:   IPR017938 [H]

Pfam domain/function: PF01383 CpcD; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 40856; Mature: 40725

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNQTEVVLGGIAHIPLVIGAFYVVKALFYRGQDGKLVPFSFSYRQAAQIKSSSTTTST
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCC
EKPDTKSPPAQKAIPINLYKPKAPFEGTVLENYSLVKEGAVGRVNHITFNLAGSDPHLSY
CCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHCCCCCEEEEEEEEECCCCCCEEE
VEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDNLEGKTVSLCVRQLQYELDGKTINGV
ECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH
CSSYLCDINPGAKTKITGPVGKEMLLPDDEEANVIMLATGTGIAPMRAYLRRMFEPTERS
HHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCC
KNGWKFRGKAWLFMGAPYTANLLYDDDFERYLREFPDNFIYTKAISREQQNSKGGRMYIQ
CCCCEEECEEEEEECCCEEEEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEEH
DRVMEYSDQIFKMIENPKTHVYMCGLKGMEPGIDEAMTAAATAKGIDWSELRPQLKKAHR
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WHVETY
CCCCCC
>Mature Secondary Structure 
AFNQTEVVLGGIAHIPLVIGAFYVVKALFYRGQDGKLVPFSFSYRQAAQIKSSSTTTST
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCC
EKPDTKSPPAQKAIPINLYKPKAPFEGTVLENYSLVKEGAVGRVNHITFNLAGSDPHLSY
CCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHCCCCCEEEEEEEEECCCCCCEEE
VEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDNLEGKTVSLCVRQLQYELDGKTINGV
ECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH
CSSYLCDINPGAKTKITGPVGKEMLLPDDEEANVIMLATGTGIAPMRAYLRRMFEPTERS
HHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCC
KNGWKFRGKAWLFMGAPYTANLLYDDDFERYLREFPDNFIYTKAISREQQNSKGGRMYIQ
CCCCEEECEEEEEECCCEEEEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEEH
DRVMEYSDQIFKMIENPKTHVYMCGLKGMEPGIDEAMTAAATAKGIDWSELRPQLKKAHR
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WHVETY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]