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The map label for this gene is ddpA [H]

Identifier: 124022595

GI number: 124022595

Start: 803195

End: 804670

Strand: Reverse

Name: ddpA [H]

Synonym: P9303_08861

Alternate gene names: 124022595

Gene position: 804670-803195 (Counterclockwise)

Preceding gene: 124022596

Following gene: 124022594

Centisome position: 30.0

GC content: 56.91

Gene sequence:

>1476_bases
GTGGCCAGTGCCGGCAAGATCACCTCTCTGGATCCTGCCCAGGCCAGTACTTTTGATGCTCTGCAACTGCTGAGCGCCCT
CGGGGACCCCCTCTACCGACTTGATCACAAAGGGGACCTAGAGCCACGACTGGCATCCGCCCCACCTCAGATCAGTGATG
GCGGCTTCACCATCTCGATCCCTCTGCGCAAGGATGTGCTGTTTCACGACGGCACCCAATTCAACGCCGCCGCGATGGCC
TTCAGCCTGCGGCGATTTCTGCGTATCGGCACCCTCAACTACGTGGTAGGGGGACGGATTGCCGCCGTGGAGGCAGCCGG
TCCCTACCTGCTAAGCCTTCGACTAACACGACCCTCCACTTCTCTAGAGGGACTACTCACCTCAATCAATCTGACGCCGG
TCTCACCAACGGCCTACGCCAAGCACAGAAATCAGTTCCTCAATAAGCAATTCATTGGAACCGGCCCTTACCGACTCACT
AGCTTCCAGACCCAGCAACAACGCCTTGAGCCTTTTCAGCAGTACTGGAGTACCGAGGCCAGTAATGCTGGAATCGATTT
CATCAATCTGAGCAACTCCACTGCCCTATTCGGTGCCCTACGAAGCGGTGAAGTGGATGTACTACTTTCCAATTCACTGG
ATGAAGACCAACGCCTTGCCCTCCATCGCCTTGCCAAGCAAGGGAAGCTCCGCGAAGGAACGGGGCCAGCACTTGAGATT
GGTTACATCACTCTACTCAGTAATACCACTCCACTCAATCAACCACTCCTGCGAAAGGCCCTCGCTTACAGCCTCGACCG
TCAGCTGATGGTTGAGCGCGTGAGCTATGGACTCAGACGCCCTTTGCGGTCTTTAGTGCCGCCAAACTTGCAGGCTGAAC
CAATCACACCTTGGCCCAGCTACAACCCTCAACGAGCCAAGCAGCTGCTTCAAAAGGCAGGTTATTGCACAACTCAAAAG
CTGACACTCCCTTTCACGTTCCGTTCCAACGTGCCAGCAGACAAGCTATTGGCACTGACGTGGCAGGCACAGGTGGAACG
TGACCTCTCGGATTGCCTGACTCTGAAGCTCAATAGCGTCGAATCGACCACCGTTTACCGCCAACTGGGGGAGGGCGCAT
TCCAGGCAGTCATCCTTGAGTGGCGAGGCGCCTATCCCGACCCGGAAGCCTATTTAGCTCCATTATTAAGCTGCAGCAAA
GCCAATGGACCTGTATGCGAAGAGGGGGAAGCGGCAATTAGCGGCAGCTTCTGGACCGCAAATGGGCTGGAAGCGAGCCT
TCGCCACAGCGATGAACTTCGCGGACCCGATCGTCTCCACCAGCTCGGAGAGATTGAGCACCGCGCCGCCGCAGGAGCGG
CCTATCTACCAATCTGGCTGGTAGCACCACGAGCTTGGGCCCAGCTGCGCTTATCCAAGCCAGAATTTGACGGTAGTGGC
CAGTTAATGCTCCCCCGTCTACGGGAGCTGCACTGA

Upstream 100 bases:

>100_bases
CCGTCGTGATTCTCGGCGCTGTGCCGCTGCTCTATTTGCTTTCTACCTTGCGCTGAGCCAGGTTGCCTGTAAGCCTCCTC
GCCGTAGTGAGCGACTTGTC

Downstream 100 bases:

>100_bases
TGGGCAGAGGGAGAGAACTACTGCGCTATAGCTCGACCCGCTTGGCCCTGGCACCGGTGATGCTCTGGCTCATTGCCAGC
ATGGTGTTTCTACTCCTACG

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MASAGKITSLDPAQASTFDALQLLSALGDPLYRLDHKGDLEPRLASAPPQISDGGFTISIPLRKDVLFHDGTQFNAAAMA
FSLRRFLRIGTLNYVVGGRIAAVEAAGPYLLSLRLTRPSTSLEGLLTSINLTPVSPTAYAKHRNQFLNKQFIGTGPYRLT
SFQTQQQRLEPFQQYWSTEASNAGIDFINLSNSTALFGALRSGEVDVLLSNSLDEDQRLALHRLAKQGKLREGTGPALEI
GYITLLSNTTPLNQPLLRKALAYSLDRQLMVERVSYGLRRPLRSLVPPNLQAEPITPWPSYNPQRAKQLLQKAGYCTTQK
LTLPFTFRSNVPADKLLALTWQAQVERDLSDCLTLKLNSVESTTVYRQLGEGAFQAVILEWRGAYPDPEAYLAPLLSCSK
ANGPVCEEGEAAISGSFWTANGLEASLRHSDELRGPDRLHQLGEIEHRAAAGAAYLPIWLVAPRAWAQLRLSKPEFDGSG
QLMLPRLRELH

Sequences:

>Translated_491_residues
MASAGKITSLDPAQASTFDALQLLSALGDPLYRLDHKGDLEPRLASAPPQISDGGFTISIPLRKDVLFHDGTQFNAAAMA
FSLRRFLRIGTLNYVVGGRIAAVEAAGPYLLSLRLTRPSTSLEGLLTSINLTPVSPTAYAKHRNQFLNKQFIGTGPYRLT
SFQTQQQRLEPFQQYWSTEASNAGIDFINLSNSTALFGALRSGEVDVLLSNSLDEDQRLALHRLAKQGKLREGTGPALEI
GYITLLSNTTPLNQPLLRKALAYSLDRQLMVERVSYGLRRPLRSLVPPNLQAEPITPWPSYNPQRAKQLLQKAGYCTTQK
LTLPFTFRSNVPADKLLALTWQAQVERDLSDCLTLKLNSVESTTVYRQLGEGAFQAVILEWRGAYPDPEAYLAPLLSCSK
ANGPVCEEGEAAISGSFWTANGLEASLRHSDELRGPDRLHQLGEIEHRAAAGAAYLPIWLVAPRAWAQLRLSKPEFDGSG
QLMLPRLRELH
>Mature_490_residues
ASAGKITSLDPAQASTFDALQLLSALGDPLYRLDHKGDLEPRLASAPPQISDGGFTISIPLRKDVLFHDGTQFNAAAMAF
SLRRFLRIGTLNYVVGGRIAAVEAAGPYLLSLRLTRPSTSLEGLLTSINLTPVSPTAYAKHRNQFLNKQFIGTGPYRLTS
FQTQQQRLEPFQQYWSTEASNAGIDFINLSNSTALFGALRSGEVDVLLSNSLDEDQRLALHRLAKQGKLREGTGPALEIG
YITLLSNTTPLNQPLLRKALAYSLDRQLMVERVSYGLRRPLRSLVPPNLQAEPITPWPSYNPQRAKQLLQKAGYCTTQKL
TLPFTFRSNVPADKLLALTWQAQVERDLSDCLTLKLNSVESTTVYRQLGEGAFQAVILEWRGAYPDPEAYLAPLLSCSKA
NGPVCEEGEAAISGSFWTANGLEASLRHSDELRGPDRLHQLGEIEHRAAAGAAYLPIWLVAPRAWAQLRLSKPEFDGSGQ
LMLPRLRELH

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=352, Percent_Identity=27.5568181818182, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787762, Length=382, Percent_Identity=24.6073298429319, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789966, Length=382, Percent_Identity=22.7748691099476, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789887, Length=414, Percent_Identity=24.3961352657005, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787551, Length=425, Percent_Identity=23.7647058823529, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1787495, Length=428, Percent_Identity=22.4299065420561, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081878, Length=426, Percent_Identity=23.0046948356808, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789397, Length=424, Percent_Identity=23.5849056603774, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 54085; Mature: 53954

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAGKITSLDPAQASTFDALQLLSALGDPLYRLDHKGDLEPRLASAPPQISDGGFTISI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEE
PLRKDVLFHDGTQFNAAAMAFSLRRFLRIGTLNYVVGGRIAAVEAAGPYLLSLRLTRPST
ECCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCEEEEEEEECCCC
SLEGLLTSINLTPVSPTAYAKHRNQFLNKQFIGTGPYRLTSFQTQQQRLEPFQQYWSTEA
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCC
SNAGIDFINLSNSTALFGALRSGEVDVLLSNSLDEDQRLALHRLAKQGKLREGTGPALEI
CCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
GYITLLSNTTPLNQPLLRKALAYSLDRQLMVERVSYGLRRPLRSLVPPNLQAEPITPWPS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YNPQRAKQLLQKAGYCTTQKLTLPFTFRSNVPADKLLALTWQAQVERDLSDCLTLKLNSV
CCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHEEEEEHHHHHHHHHHHHHEEEECCC
ESTTVYRQLGEGAFQAVILEWRGAYPDPEAYLAPLLSCSKANGPVCEEGEAAISGSFWTA
HHHHHHHHHCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEC
NGLEASLRHSDELRGPDRLHQLGEIEHRAAAGAAYLPIWLVAPRAWAQLRLSKPEFDGSG
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHEECCCCCCCCCC
QLMLPRLRELH
CEECCHHHCCC
>Mature Secondary Structure 
ASAGKITSLDPAQASTFDALQLLSALGDPLYRLDHKGDLEPRLASAPPQISDGGFTISI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEE
PLRKDVLFHDGTQFNAAAMAFSLRRFLRIGTLNYVVGGRIAAVEAAGPYLLSLRLTRPST
ECCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCEEEEEEEECCCC
SLEGLLTSINLTPVSPTAYAKHRNQFLNKQFIGTGPYRLTSFQTQQQRLEPFQQYWSTEA
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCC
SNAGIDFINLSNSTALFGALRSGEVDVLLSNSLDEDQRLALHRLAKQGKLREGTGPALEI
CCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
GYITLLSNTTPLNQPLLRKALAYSLDRQLMVERVSYGLRRPLRSLVPPNLQAEPITPWPS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
YNPQRAKQLLQKAGYCTTQKLTLPFTFRSNVPADKLLALTWQAQVERDLSDCLTLKLNSV
CCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHEEEEEHHHHHHHHHHHHHEEEECCC
ESTTVYRQLGEGAFQAVILEWRGAYPDPEAYLAPLLSCSKANGPVCEEGEAAISGSFWTA
HHHHHHHHHCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEC
NGLEASLRHSDELRGPDRLHQLGEIEHRAAAGAAYLPIWLVAPRAWAQLRLSKPEFDGSG
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHEECCCCCCCCCC
QLMLPRLRELH
CEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA