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The map label for this gene is dppB [H]

Identifier: 124022594

GI number: 124022594

Start: 802176

End: 803195

Strand: Reverse

Name: dppB [H]

Synonym: P9303_08851

Alternate gene names: 124022594

Gene position: 803195-802176 (Counterclockwise)

Preceding gene: 124022595

Following gene: 124022592

Centisome position: 29.94

GC content: 56.96

Gene sequence:

>1020_bases
ATGGGCAGAGGGAGAGAACTACTGCGCTATAGCTCGACCCGCTTGGCCCTGGCACCGGTGATGCTCTGGCTCATTGCCAG
CATGGTGTTTCTACTCCTACGGGTGGCACCAGGAGACCCAGTCGATGCCGTGTTAGGCAATCGTGCGCCAGCAGCAGCCC
GCGCTGCTCTGCGCACCAGGCTTGGACTGGATCAACCGCTTTTGCATCAATACCTGCACTTCATCAAAGACTTAATTCAT
GGCGATCTAGGCCAAGCTCTTCTCAACCAGGAACCAGTGAGCAAGATCATTGCCAGAGCCCTGCCAGCCAGCTTGGAACT
AAGCCTGACGGCACTATTGATTGCTGCAGTGGTTGGTCTGGTCGTTGGTTTCAGTGGTATTGCCCGCCCGGAAGGCAAGC
TAGATCTCGCAGGGCGCCTCTACGGCATTGGCACCTATGCCCTGCCACCGTTCTGGGCCGCGATGATCGTTCAACTGCTG
TTTGCAGTCATTCTCGGTTGGCTGCCAATTGGCGGACGTTTTCCCCCGAGCTTGCTACCACCAGAGGGGAGCGGCTTCCT
AATCCTCGACAGTCTGCGGAGCAGCGACTGGATATCTCTTCAAGGAGCATTGAGACACCTGGTGTTACCCGCAGGGACCC
TAGGCCTTCTCCTCAGCGGGATTTTCACCCGTACCCTGCGACTCAATCTTGGCCGCACACTGCAATCCGATTACGTTGAA
GCTGCCCGTAGCCGGGGGCTGAATGAGCAACAGGTGGTGCTAAACCATGCCCTCCCTAATGCCCTTCTGCCAGTACTCAC
CATTGCTGGGATCACAGTGGCATCGCTGATTGGCGGCGCACTGTTAATTGAAGTCACCTTCTCCTGGCCAGGCATCGCCC
TACGGCTCCAAGAAGCAATCAACCAACGCGACTACCCAGTGGTTCAAGGAATTGTGGTTGTCGTGGCTGCCCTAATGGTG
CTGGTAAGCGTGAGCGTGGATCTGCTTGTTGCTCTGATTGATCCCCGCGTCCGCTACTGA

Upstream 100 bases:

>100_bases
GGCTGGTAGCACCACGAGCTTGGGCCCAGCTGCGCTTATCCAAGCCAGAATTTGACGGTAGTGGCCAGTTAATGCTCCCC
CGTCTACGGGAGCTGCACTG

Downstream 100 bases:

>100_bases
GATTCGCGAAGTCTCTCTGCTGCATTGCGATCCAAACGATGAAGCCGCAAATCCCCGACCTGCTGATGTGTGGAGCCCTC
AAGGGCTTCGCCAGCCTCAA

Product: peptide ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MGRGRELLRYSSTRLALAPVMLWLIASMVFLLLRVAPGDPVDAVLGNRAPAAARAALRTRLGLDQPLLHQYLHFIKDLIH
GDLGQALLNQEPVSKIIARALPASLELSLTALLIAAVVGLVVGFSGIARPEGKLDLAGRLYGIGTYALPPFWAAMIVQLL
FAVILGWLPIGGRFPPSLLPPEGSGFLILDSLRSSDWISLQGALRHLVLPAGTLGLLLSGIFTRTLRLNLGRTLQSDYVE
AARSRGLNEQQVVLNHALPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAINQRDYPVVQGIVVVVAALMV
LVSVSVDLLVALIDPRVRY

Sequences:

>Translated_339_residues
MGRGRELLRYSSTRLALAPVMLWLIASMVFLLLRVAPGDPVDAVLGNRAPAAARAALRTRLGLDQPLLHQYLHFIKDLIH
GDLGQALLNQEPVSKIIARALPASLELSLTALLIAAVVGLVVGFSGIARPEGKLDLAGRLYGIGTYALPPFWAAMIVQLL
FAVILGWLPIGGRFPPSLLPPEGSGFLILDSLRSSDWISLQGALRHLVLPAGTLGLLLSGIFTRTLRLNLGRTLQSDYVE
AARSRGLNEQQVVLNHALPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAINQRDYPVVQGIVVVVAALMV
LVSVSVDLLVALIDPRVRY
>Mature_338_residues
GRGRELLRYSSTRLALAPVMLWLIASMVFLLLRVAPGDPVDAVLGNRAPAAARAALRTRLGLDQPLLHQYLHFIKDLIHG
DLGQALLNQEPVSKIIARALPASLELSLTALLIAAVVGLVVGFSGIARPEGKLDLAGRLYGIGTYALPPFWAAMIVQLLF
AVILGWLPIGGRFPPSLLPPEGSGFLILDSLRSSDWISLQGALRHLVLPAGTLGLLLSGIFTRTLRLNLGRTLQSDYVEA
ARSRGLNEQQVVLNHALPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAINQRDYPVVQGIVVVVAALMVL
VSVSVDLLVALIDPRVRY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=34.7181008902077, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787053, Length=334, Percent_Identity=31.437125748503, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=38.5350318471338, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1789888, Length=336, Percent_Identity=33.9285714285714, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1787497, Length=335, Percent_Identity=29.2537313432836, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=32.2344322344322, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1788504, Length=370, Percent_Identity=27.027027027027, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36334; Mature: 36203

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGRELLRYSSTRLALAPVMLWLIASMVFLLLRVAPGDPVDAVLGNRAPAAARAALRTR
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHH
LGLDQPLLHQYLHFIKDLIHGDLGQALLNQEPVSKIIARALPASLELSLTALLIAAVVGL
CCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VVGFSGIARPEGKLDLAGRLYGIGTYALPPFWAAMIVQLLFAVILGWLPIGGRFPPSLLP
HHHHCCCCCCCCCEECCHHEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PEGSGFLILDSLRSSDWISLQGALRHLVLPAGTLGLLLSGIFTRTLRLNLGRTLQSDYVE
CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AARSRGLNEQQVVLNHALPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAI
HHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
NQRDYPVVQGIVVVVAALMVLVSVSVDLLVALIDPRVRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRGRELLRYSSTRLALAPVMLWLIASMVFLLLRVAPGDPVDAVLGNRAPAAARAALRTR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHH
LGLDQPLLHQYLHFIKDLIHGDLGQALLNQEPVSKIIARALPASLELSLTALLIAAVVGL
CCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VVGFSGIARPEGKLDLAGRLYGIGTYALPPFWAAMIVQLLFAVILGWLPIGGRFPPSLLP
HHHHCCCCCCCCCEECCHHEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PEGSGFLILDSLRSSDWISLQGALRHLVLPAGTLGLLLSGIFTRTLRLNLGRTLQSDYVE
CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AARSRGLNEQQVVLNHALPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAI
HHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
NQRDYPVVQGIVVVVAALMVLVSVSVDLLVALIDPRVRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]