| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022581
Identifier: 124022581
GI number: 124022581
Start: 793048
End: 794598
Strand: Direct
Name: 124022581
Synonym: P9303_08721
Alternate gene names: NA
Gene position: 793048-794598 (Clockwise)
Preceding gene: 124022580
Following gene: 124022584
Centisome position: 29.56
GC content: 39.91
Gene sequence:
>1551_bases TTGGTCTCGACAACTGCCACCATTAAGCGACAGTGGATATGGATATTTGCCCTCTTGTCGCTCCTGATTGGATCATTCTG TATCAATTACTGGGGCAACGACTTTCCGTTGTGGTTGCATCCGGATGAAATCAAAAAAGTGATTTACATTAGTGGCGATA AAAAAACAGATTTCTATCACCCTCAATTAATCCTTAAACTTGGCCGACTCTTTGCTGATATAGCTTCTGCATCCTCACAA CAAGATGTAGTTCAAGCCGGGCGCACGTCCACGGCTTTTCTTGGAAGCTTTGTGGTGCTGTTCACTTTTGGTTTAGCTAG GCAGTTCTTATCAGCACCAGCATCTTTGCTTGCCGCCAGCCTGACGGCGGCATCTCCAGGAATTGTCATTCATAGCCATT ACTTGAAAGAGGATATTGCTTTGACTTGTTTTGCAACAGCCTCTTTGCTGCTTGCAATAGTTACAGCAAAAGAATCAGTT GGAGATATCTCTTCCAAAACTATCGATTACAAAATCCCAGTTCTTTGGGGTCTTCTTACAGGTCTAGCGATCGCCAGTAA ATACACAGCTTTTTTATTATTTCCTTTTTATTTCTTTCTACCATGGCTCATCAGGAAAGTTCATCGAAAAACTTTTCATA AAAAACTGATAATAAGCGCATCAATCGCTGCGATTATTTTTTTGCTGATTAACAATCATCTATTTGCAGACTTCAAAACC TTTACTTCGGGAGCAGAATTTGAGCTGAATCATGTCTTAAGTGGTCACAAAGGGATAAAGATTTACCCCTGGCATAATTT GATTCATCTCACCAAAAATCTCCCCGATTCAATCGGACCTTTAACTTTAATTCTGGGTTTGTTTGGTATGAGCGGAGAGA TTTGGAGGTCGAGAAGAGCAAATATCTCCCGTCGGATAACTTTTTATTTCACAATCTATTTTTATATTATTTTGGAATGT TTACCACTGAAACCGCCACCTGGAGATGCACGTTATGTCCTTCCACTGATTCCTCCGCTCACCTGCTTTGCTGCATCTGC AGTTAGTGAGTTGAGTAATTGGTTGAAATCTAGAATTAATTTTTCCTTGTCAATAGCAATAGCTTTAAGTGTGGCAACAT TAATACCATCGATTTCTAGGAGCTTAGAGCTAAACCAATATCTAAGGGATGATATAAGAACTCGGATTCCAGCAGAAATC GGAACATATTTAAAGCCCATATGGATGGATGGTTATGCGGGCTACCATTTTCTTGAGGATTCAGTTCAAGCGGAGATTTT AACAAAATCAGATAATAAATTTGATACAAATATTTCGCTTGAATCCCCCCAGGAAAAGATCTGTACGTTCATTACTAGTA GTTTCATTTACGAAAGGTATTTGAGGGCATCAAGGTTTTCTGGCCAAGGGGAAAACGTATATGAAATGAGTCACTTTTAT CAACGTCTTTTTGACCGGCCATTTAAGGACCTTAATCCTAATGAACCGTCGTATTCGTTTGTCAATCCCACTCTCCGAAT CGTCAACCTCTGCCAATCAAAAACAGAGTGA
Upstream 100 bases:
>100_bases TTTAATCCTGCGACCTTACTGCTCCCAAAGAAAATTAACTAATCAAGATCATTATGATCTATATGAGCTAGTAAAATATA AGTTTCAGTCTGCTTAGGGT
Downstream 100 bases:
>100_bases GGTAAATAGTGAAGCATTGATTAAATTAATAGTTTTCTCCATGATTACATTCCAGAGTTGTTCGGGCTTTATTCTAACTT ACGTCTAACCGTAAGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MVSTTATIKRQWIWIFALLSLLIGSFCINYWGNDFPLWLHPDEIKKVIYISGDKKTDFYHPQLILKLGRLFADIASASSQ QDVVQAGRTSTAFLGSFVVLFTFGLARQFLSAPASLLAASLTAASPGIVIHSHYLKEDIALTCFATASLLLAIVTAKESV GDISSKTIDYKIPVLWGLLTGLAIASKYTAFLLFPFYFFLPWLIRKVHRKTFHKKLIISASIAAIIFLLINNHLFADFKT FTSGAEFELNHVLSGHKGIKIYPWHNLIHLTKNLPDSIGPLTLILGLFGMSGEIWRSRRANISRRITFYFTIYFYIILEC LPLKPPPGDARYVLPLIPPLTCFAASAVSELSNWLKSRINFSLSIAIALSVATLIPSISRSLELNQYLRDDIRTRIPAEI GTYLKPIWMDGYAGYHFLEDSVQAEILTKSDNKFDTNISLESPQEKICTFITSSFIYERYLRASRFSGQGENVYEMSHFY QRLFDRPFKDLNPNEPSYSFVNPTLRIVNLCQSKTE
Sequences:
>Translated_516_residues MVSTTATIKRQWIWIFALLSLLIGSFCINYWGNDFPLWLHPDEIKKVIYISGDKKTDFYHPQLILKLGRLFADIASASSQ QDVVQAGRTSTAFLGSFVVLFTFGLARQFLSAPASLLAASLTAASPGIVIHSHYLKEDIALTCFATASLLLAIVTAKESV GDISSKTIDYKIPVLWGLLTGLAIASKYTAFLLFPFYFFLPWLIRKVHRKTFHKKLIISASIAAIIFLLINNHLFADFKT FTSGAEFELNHVLSGHKGIKIYPWHNLIHLTKNLPDSIGPLTLILGLFGMSGEIWRSRRANISRRITFYFTIYFYIILEC LPLKPPPGDARYVLPLIPPLTCFAASAVSELSNWLKSRINFSLSIAIALSVATLIPSISRSLELNQYLRDDIRTRIPAEI GTYLKPIWMDGYAGYHFLEDSVQAEILTKSDNKFDTNISLESPQEKICTFITSSFIYERYLRASRFSGQGENVYEMSHFY QRLFDRPFKDLNPNEPSYSFVNPTLRIVNLCQSKTE >Mature_516_residues MVSTTATIKRQWIWIFALLSLLIGSFCINYWGNDFPLWLHPDEIKKVIYISGDKKTDFYHPQLILKLGRLFADIASASSQ QDVVQAGRTSTAFLGSFVVLFTFGLARQFLSAPASLLAASLTAASPGIVIHSHYLKEDIALTCFATASLLLAIVTAKESV GDISSKTIDYKIPVLWGLLTGLAIASKYTAFLLFPFYFFLPWLIRKVHRKTFHKKLIISASIAAIIFLLINNHLFADFKT FTSGAEFELNHVLSGHKGIKIYPWHNLIHLTKNLPDSIGPLTLILGLFGMSGEIWRSRRANISRRITFYFTIYFYIILEC LPLKPPPGDARYVLPLIPPLTCFAASAVSELSNWLKSRINFSLSIAIALSVATLIPSISRSLELNQYLRDDIRTRIPAEI GTYLKPIWMDGYAGYHFLEDSVQAEILTKSDNKFDTNISLESPQEKICTFITSSFIYERYLRASRFSGQGENVYEMSHFY QRLFDRPFKDLNPNEPSYSFVNPTLRIVNLCQSKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58383; Mature: 58383
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTTATIKRQWIWIFALLSLLIGSFCINYWGNDFPLWLHPDEIKKVIYISGDKKTDFYH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHCCEEEEEECCCCCCCCC PQLILKLGRLFADIASASSQQDVVQAGRTSTAFLGSFVVLFTFGLARQFLSAPASLLAAS HHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTAASPGIVIHSHYLKEDIALTCFATASLLLAIVTAKESVGDISSKTIDYKIPVLWGLLT HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH GLAIASKYTAFLLFPFYFFLPWLIRKVHRKTFHKKLIISASIAAIIFLLINNHLFADFKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FTSGAEFELNHVLSGHKGIKIYPWHNLIHLTKNLPDSIGPLTLILGLFGMSGEIWRSRRA HCCCCCEEHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHC NISRRITFYFTIYFYIILECLPLKPPPGDARYVLPLIPPLTCFAASAVSELSNWLKSRIN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC FSLSIAIALSVATLIPSISRSLELNQYLRDDIRTRIPAEIGTYLKPIWMDGYAGYHFLED CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH SVQAEILTKSDNKFDTNISLESPQEKICTFITSSFIYERYLRASRFSGQGENVYEMSHFY CHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QRLFDRPFKDLNPNEPSYSFVNPTLRIVNLCQSKTE HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MVSTTATIKRQWIWIFALLSLLIGSFCINYWGNDFPLWLHPDEIKKVIYISGDKKTDFYH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHCCEEEEEECCCCCCCCC PQLILKLGRLFADIASASSQQDVVQAGRTSTAFLGSFVVLFTFGLARQFLSAPASLLAAS HHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTAASPGIVIHSHYLKEDIALTCFATASLLLAIVTAKESVGDISSKTIDYKIPVLWGLLT HHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH GLAIASKYTAFLLFPFYFFLPWLIRKVHRKTFHKKLIISASIAAIIFLLINNHLFADFKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FTSGAEFELNHVLSGHKGIKIYPWHNLIHLTKNLPDSIGPLTLILGLFGMSGEIWRSRRA HCCCCCEEHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHC NISRRITFYFTIYFYIILECLPLKPPPGDARYVLPLIPPLTCFAASAVSELSNWLKSRIN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC FSLSIAIALSVATLIPSISRSLELNQYLRDDIRTRIPAEIGTYLKPIWMDGYAGYHFLED CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH SVQAEILTKSDNKFDTNISLESPQEKICTFITSSFIYERYLRASRFSGQGENVYEMSHFY CHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QRLFDRPFKDLNPNEPSYSFVNPTLRIVNLCQSKTE HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA