| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022573
Identifier: 124022573
GI number: 124022573
Start: 781634
End: 782053
Strand: Reverse
Name: 124022573
Synonym: P9303_08641
Alternate gene names: NA
Gene position: 782053-781634 (Counterclockwise)
Preceding gene: 124022574
Following gene: 124022568
Centisome position: 29.15
GC content: 54.76
Gene sequence:
>420_bases ATGGGCACGCAAGGCCGTACAAGAGCAGGTAACACGGGGCACCCGTCGCCTACCACTGCTAGCCCTGAAAGCATGAATTT CAAGGTGAGTCATCACCTACTGCTTTGCGCAACACCCAACAAGGCGGCCTGTTGCAGTGCAGCTGTCGGCAACGCTAGCT GGGCCAATCTCAAAAAACTAATCAAACAGCTTGATCTCGAAAACATTGATCGGCCAGAAGGTGTGGTTCTGCGTAGCAAG GTCGACTGTCTACGCATCTGCAACGACGGACCAATCCTGCTGATCTGGCCAGACGGGATCTGGTATGGCGGAGTGACACC AGAACGAATCGAATCAATCGTGAGAGAGCATGTGCTTGGAGGCCAACCCATCGAAGCCTGGATCATCCGCCGGACCCCTC AGCAGCAGAGACATCTCTGA
Upstream 100 bases:
>100_bases ATTTTCTTGACATCCCGGAAGTTATCGAGGCTGCCTGTGAACGCCACAAGCCCGACCTGCAGACACAACCCCAGCTTGAT GACGTGCTTGCTGTAGATGC
Downstream 100 bases:
>100_bases GTTTTTAGTCAAGCTCCAAACTTTGACAGCCAACGGGCCACCACCTGATCCCCCCAGCAGCCTCCGATTGCATGGAAACC ATTGTGACCGCCGTGAGGTG
Product: ferredoxin
Products: NA
Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 2Fe-2S; Ferredoxin Like Protein; Ferredoxin-Like; Sucraseferredoxin Family Protein; Ferredoxin 2fe-2s; Ferredoxin 2Fe-2S Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MGTQGRTRAGNTGHPSPTTASPESMNFKVSHHLLLCATPNKAACCSAAVGNASWANLKKLIKQLDLENIDRPEGVVLRSK VDCLRICNDGPILLIWPDGIWYGGVTPERIESIVREHVLGGQPIEAWIIRRTPQQQRHL
Sequences:
>Translated_139_residues MGTQGRTRAGNTGHPSPTTASPESMNFKVSHHLLLCATPNKAACCSAAVGNASWANLKKLIKQLDLENIDRPEGVVLRSK VDCLRICNDGPILLIWPDGIWYGGVTPERIESIVREHVLGGQPIEAWIIRRTPQQQRHL >Mature_138_residues GTQGRTRAGNTGHPSPTTASPESMNFKVSHHLLLCATPNKAACCSAAVGNASWANLKKLIKQLDLENIDRPEGVVLRSKV DCLRICNDGPILLIWPDGIWYGGVTPERIESIVREHVLGGQPIEAWIIRRTPQQQRHL
Specific function: Unknown
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15296; Mature: 15165
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTQGRTRAGNTGHPSPTTASPESMNFKVSHHLLLCATPNKAACCSAAVGNASWANLKKL CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCHHHHHCCCCCCHHHHHHH IKQLDLENIDRPEGVVLRSKVDCLRICNDGPILLIWPDGIWYGGVTPERIESIVREHVLG HHHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCC GQPIEAWIIRRTPQQQRHL CCCCEEEEEECCCHHHCCC >Mature Secondary Structure GTQGRTRAGNTGHPSPTTASPESMNFKVSHHLLLCATPNKAACCSAAVGNASWANLKKL CCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCHHHHHCCCCCCHHHHHHH IKQLDLENIDRPEGVVLRSKVDCLRICNDGPILLIWPDGIWYGGVTPERIESIVREHVLG HHHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCC GQPIEAWIIRRTPQQQRHL CCCCEEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA