| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022568
Identifier: 124022568
GI number: 124022568
Start: 776941
End: 777519
Strand: Reverse
Name: 124022568
Synonym: P9303_08591
Alternate gene names: NA
Gene position: 777519-776941 (Counterclockwise)
Preceding gene: 124022573
Following gene: 124022566
Centisome position: 28.98
GC content: 52.85
Gene sequence:
>579_bases ATGGGCCTAACTGCAATCGAATGTCCGGATGGTGTTTGCCATAGCCATCACGGAGGCCATGCTGTGGAGCGCTCCACAAT GCAGAACAACCTCCAGGGACACGGGAGAGAATGGTGTGAACGCCTGGCAGAACGGATCTACGAGATTTCGGTGGATACCT TCTCCCAGACAGTGATGCCTAGCCTCCATTCCGCAGGATGGCAGCGACGCCATTTGGATTGGGAATTCAAGCTCGACAAA CAGGAGTCAGAACCTGACAAAGCTTTGGTAGACGGCATTATTAACGCCACCGAGAGTTTCCTACGCAGCAGTGAAGTCCA CCGACTTTTCATTCAAGAACTGGTTCAGGGAACCTTTGCTGAAGCCGGTTCAGACACCCTGAGGGCATCAGCCGTTCAAA AGCTGATCGAAAACGAATTGCTAACGATGCTCAAGGAGCAAAAGGAGCAATTGCTCGATCGCTTAGCTAGTCAACTCATG GATGAGGCTCAGGGCAACTTCGAGATCGCACACACTGCCGCAAGCGAAGGCCTCAATGAGGTTGAGCACCTGCTCGTGAA CCACACCGAAGCGCTCTGA
Upstream 100 bases:
>100_bases GATTACGGGGTCGACCTCCCGGCACCGGGAGCTTTCCTGAAGAAAAGAGTTTTTCAGCTGGCTTTATAGCTAAGAAGGAT TGTTAACTCCAACTCCCTCC
Downstream 100 bases:
>100_bases ACTCAGTCAGACAATTGGGAGCAACTCCTGCTCTATCGCCAAGGCCTGAAGCTTCAGCCCTTGGCGATAGAGCCAGCGTG TTCTCAGAATCAGCGGATCA
Product: EF-1 guanine nucleotide exchange domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGLTAIECPDGVCHSHHGGHAVERSTMQNNLQGHGREWCERLAERIYEISVDTFSQTVMPSLHSAGWQRRHLDWEFKLDK QESEPDKALVDGIINATESFLRSSEVHRLFIQELVQGTFAEAGSDTLRASAVQKLIENELLTMLKEQKEQLLDRLASQLM DEAQGNFEIAHTAASEGLNEVEHLLVNHTEAL
Sequences:
>Translated_192_residues MGLTAIECPDGVCHSHHGGHAVERSTMQNNLQGHGREWCERLAERIYEISVDTFSQTVMPSLHSAGWQRRHLDWEFKLDK QESEPDKALVDGIINATESFLRSSEVHRLFIQELVQGTFAEAGSDTLRASAVQKLIENELLTMLKEQKEQLLDRLASQLM DEAQGNFEIAHTAASEGLNEVEHLLVNHTEAL >Mature_191_residues GLTAIECPDGVCHSHHGGHAVERSTMQNNLQGHGREWCERLAERIYEISVDTFSQTVMPSLHSAGWQRRHLDWEFKLDKQ ESEPDKALVDGIINATESFLRSSEVHRLFIQELVQGTFAEAGSDTLRASAVQKLIENELLTMLKEQKEQLLDRLASQLMD EAQGNFEIAHTAASEGLNEVEHLLVNHTEAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21612; Mature: 21481
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTAIECPDGVCHSHHGGHAVERSTMQNNLQGHGREWCERLAERIYEISVDTFSQTVMP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLHSAGWQRRHLDWEFKLDKQESEPDKALVDGIINATESFLRSSEVHRLFIQELVQGTFA HHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGSDTLRASAVQKLIENELLTMLKEQKEQLLDRLASQLMDEAQGNFEIAHTAASEGLNE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH VEHLLVNHTEAL HHHHHHHHHHCC >Mature Secondary Structure GLTAIECPDGVCHSHHGGHAVERSTMQNNLQGHGREWCERLAERIYEISVDTFSQTVMP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLHSAGWQRRHLDWEFKLDKQESEPDKALVDGIINATESFLRSSEVHRLFIQELVQGTFA HHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGSDTLRASAVQKLIENELLTMLKEQKEQLLDRLASQLMDEAQGNFEIAHTAASEGLNE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH VEHLLVNHTEAL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA