| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pntB [H]
Identifier: 124022571
GI number: 124022571
Start: 779093
End: 780532
Strand: Direct
Name: pntB [H]
Synonym: P9303_08621
Alternate gene names: 124022571
Gene position: 779093-780532 (Clockwise)
Preceding gene: 124022570
Following gene: 124022572
Centisome position: 29.04
GC content: 55.56
Gene sequence:
>1440_bases ATGAATATTGCTGAGATCCTTAAGTTCGCGATTGATCTGGTCGCGGTTTTACTGCTTGCCCTTGGGATCAAGGGCCTTTC GAAGGTGCGCTCTGCTCGTGAGGCCAATCGCCTTGCCGCTGTTGCCATGGCACTTGCCGTAGTGGGCTTGATCGTGAACT ATCTCGGCACCACCGGCATCGCTGCTGAAGCCTGGATTTGGATCATCTTCGGCACGGTGGTCGGTGGATGTCTCGGTGCG ATCACAGCGCAGCGTGTGCCGATGACCTCAATGCCGGAGACCGTTGCTCTGTTTAACGGCTGCGGAGGCATGTCGTCGTT GTTGGTGGCTCTCGGTGTTGCAATCTTCCCGACAGCCGCTGGTGCTGGCGAAGCAGGCAGCGGAGTGGTTGAAGACATCT CGATTGTGGTGTCTGTTTTTGTTGGCTCGATCACCTTCTCAGGATCCATAGTGGCGATGGCAAAGCTGCAGGGCTGGCTG TCAACACCACCTTGGATGCAGAGCAGGGTTCGACATGCCGTGAACATTGCGCTTGCTGTGATGTCTTTAGTGGCTGCCAT CGAACTTGGCCGCCATGGCGACAACGTCAGTGCGCTGTGGTTGCTGGTGATCGGGTCTGGTTTGTTGGGAATCGGCGTAA CGCTACCGATTGGCGGCGCCGATATGCCAGTGGTGATCTCACTTTTGAACAGTTATTCAGGTGTTGCGGCGGCGGCGGCA GGTTTCGTTGTCGGTAGTCAGTTGCTGATTGTGGCTGGCGCCATGGTTGGAGCTGCTGGTCTGATCCTTACTCAGGTGAT GTGCAACGGCATGAATCGCTCGTTGGTATCCGTGTTGTTTGGTGGAGCGTTAGGAGCAAGCGCTGCTGCTGGCGGAGGTG GCGAATATAAAAACATCACCAGTTGCAGCGCTGAGGAGTGTGCGCTCACCCTTGAGGCCGCAGAGCGGGTTGTCATCGTT CCCGGTTACGGCCTGGCTGTAGCACAGGCCCAGCACACGCTTAGGGAAGTCACCCGTGCTTTGGAGGCAGCTGGAATTGA GGTCACCTATGCCATCCATCCGGTTGCTGGACGGATGCCAGGCCATATGAACGTTCTCCTTGCAGAAGCCGATGTGCCTT ACGAGCAGCTCAAGGAGATGGATGTGATTAATCCTGAGTTCCCAGCTACTGACGTGGTGCTGGTGCTAGGGGCGAACGAC GTTGTGAATCCTCAGGCCAAGACCGATACAAGTTCACCTCTCTATGGCATGCCTGTGTTGGATGTGCAGGAAGCTCGAAC GGTGTTCGTGGTGAAGCGGGGCATGAGTGCGGGCTACTCAGGGATTAAGAATGATCTGTTTGAACTTGCCAATACTTCCA TGGTGTTTGGTGATGCCAAGAAGGTGTTGGGTGATCTTTTGGTTGAACTAAAGGAGCTTGGTGTTGGCAAGAAGGGGTGA
Upstream 100 bases:
>100_bases TTGGTTTCGCCTTGTTCAACGTGATTGGCGGATTTCTCGTTACCGATCGGATGCTGGCCATGTTCAGCCGCAAGTCATCT CGCCGCAGGGACAACCACTG
Downstream 100 bases:
>100_bases ACCCCATCCCGAGCTGCTTCAGCAGCTCGGGATGTCTTCTTTTAGACAGAGATTGCCTTGGCTGGGCGGTGATTTGCAGA CCCTCAGGGACACCCTGAGA
Product: nicotinamide nucleotide transhydrogenase, subunit beta
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MNIAEILKFAIDLVAVLLLALGIKGLSKVRSAREANRLAAVAMALAVVGLIVNYLGTTGIAAEAWIWIIFGTVVGGCLGA ITAQRVPMTSMPETVALFNGCGGMSSLLVALGVAIFPTAAGAGEAGSGVVEDISIVVSVFVGSITFSGSIVAMAKLQGWL STPPWMQSRVRHAVNIALAVMSLVAAIELGRHGDNVSALWLLVIGSGLLGIGVTLPIGGADMPVVISLLNSYSGVAAAAA GFVVGSQLLIVAGAMVGAAGLILTQVMCNGMNRSLVSVLFGGALGASAAAGGGGEYKNITSCSAEECALTLEAAERVVIV PGYGLAVAQAQHTLREVTRALEAAGIEVTYAIHPVAGRMPGHMNVLLAEADVPYEQLKEMDVINPEFPATDVVLVLGAND VVNPQAKTDTSSPLYGMPVLDVQEARTVFVVKRGMSAGYSGIKNDLFELANTSMVFGDAKKVLGDLLVELKELGVGKKG
Sequences:
>Translated_479_residues MNIAEILKFAIDLVAVLLLALGIKGLSKVRSAREANRLAAVAMALAVVGLIVNYLGTTGIAAEAWIWIIFGTVVGGCLGA ITAQRVPMTSMPETVALFNGCGGMSSLLVALGVAIFPTAAGAGEAGSGVVEDISIVVSVFVGSITFSGSIVAMAKLQGWL STPPWMQSRVRHAVNIALAVMSLVAAIELGRHGDNVSALWLLVIGSGLLGIGVTLPIGGADMPVVISLLNSYSGVAAAAA GFVVGSQLLIVAGAMVGAAGLILTQVMCNGMNRSLVSVLFGGALGASAAAGGGGEYKNITSCSAEECALTLEAAERVVIV PGYGLAVAQAQHTLREVTRALEAAGIEVTYAIHPVAGRMPGHMNVLLAEADVPYEQLKEMDVINPEFPATDVVLVLGAND VVNPQAKTDTSSPLYGMPVLDVQEARTVFVVKRGMSAGYSGIKNDLFELANTSMVFGDAKKVLGDLLVELKELGVGKKG >Mature_479_residues MNIAEILKFAIDLVAVLLLALGIKGLSKVRSAREANRLAAVAMALAVVGLIVNYLGTTGIAAEAWIWIIFGTVVGGCLGA ITAQRVPMTSMPETVALFNGCGGMSSLLVALGVAIFPTAAGAGEAGSGVVEDISIVVSVFVGSITFSGSIVAMAKLQGWL STPPWMQSRVRHAVNIALAVMSLVAAIELGRHGDNVSALWLLVIGSGLLGIGVTLPIGGADMPVVISLLNSYSGVAAAAA GFVVGSQLLIVAGAMVGAAGLILTQVMCNGMNRSLVSVLFGGALGASAAAGGGGEYKNITSCSAEECALTLEAAERVVIV PGYGLAVAQAQHTLREVTRALEAAGIEVTYAIHPVAGRMPGHMNVLLAEADVPYEQLKEMDVINPEFPATDVVLVLGAND VVNPQAKTDTSSPLYGMPVLDVQEARTVFVVKRGMSAGYSGIKNDLFELANTSMVFGDAKKVLGDLLVELKELGVGKKG
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=479, Percent_Identity=37.5782881002088, Blast_Score=285, Evalue=6e-77, Organism=Homo sapiens, GI122939153, Length=479, Percent_Identity=37.5782881002088, Blast_Score=285, Evalue=6e-77, Organism=Escherichia coli, GI1787886, Length=456, Percent_Identity=44.9561403508772, Blast_Score=356, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17550456, Length=406, Percent_Identity=41.1330049261084, Blast_Score=284, Evalue=9e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 48994; Mature: 48994
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAEILKFAIDLVAVLLLALGIKGLSKVRSAREANRLAAVAMALAVVGLIVNYLGTTGI CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAEAWIWIIFGTVVGGCLGAITAQRVPMTSMPETVALFNGCGGMSSLLVALGVAIFPTAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC GAGEAGSGVVEDISIVVSVFVGSITFSGSIVAMAKLQGWLSTPPWMQSRVRHAVNIALAV CCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MSLVAAIELGRHGDNVSALWLLVIGSGLLGIGVTLPIGGADMPVVISLLNSYSGVAAAAA HHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHH GFVVGSQLLIVAGAMVGAAGLILTQVMCNGMNRSLVSVLFGGALGASAAAGGGGEYKNIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SCSAEECALTLEAAERVVIVPGYGLAVAQAQHTLREVTRALEAAGIEVTYAIHPVAGRMP CCCHHHHHEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GHMNVLLAEADVPYEQLKEMDVINPEFPATDVVLVLGANDVVNPQAKTDTSSPLYGMPVL CCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC DVQEARTVFVVKRGMSAGYSGIKNDLFELANTSMVFGDAKKVLGDLLVELKELGVGKKG CHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNIAEILKFAIDLVAVLLLALGIKGLSKVRSAREANRLAAVAMALAVVGLIVNYLGTTGI CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAEAWIWIIFGTVVGGCLGAITAQRVPMTSMPETVALFNGCGGMSSLLVALGVAIFPTAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC GAGEAGSGVVEDISIVVSVFVGSITFSGSIVAMAKLQGWLSTPPWMQSRVRHAVNIALAV CCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MSLVAAIELGRHGDNVSALWLLVIGSGLLGIGVTLPIGGADMPVVISLLNSYSGVAAAAA HHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHH GFVVGSQLLIVAGAMVGAAGLILTQVMCNGMNRSLVSVLFGGALGASAAAGGGGEYKNIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SCSAEECALTLEAAERVVIVPGYGLAVAQAQHTLREVTRALEAAGIEVTYAIHPVAGRMP CCCHHHHHEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GHMNVLLAEADVPYEQLKEMDVINPEFPATDVVLVLGANDVVNPQAKTDTSSPLYGMPVL CCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC DVQEARTVFVVKRGMSAGYSGIKNDLFELANTSMVFGDAKKVLGDLLVELKELGVGKKG CHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]