| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pntA [H]
Identifier: 124022569
GI number: 124022569
Start: 777595
End: 778788
Strand: Direct
Name: pntA [H]
Synonym: P9303_08601
Alternate gene names: 124022569
Gene position: 777595-778788 (Clockwise)
Preceding gene: 124022567
Following gene: 124022570
Centisome position: 28.99
GC content: 55.11
Gene sequence:
>1194_bases GTGCCGGGAGGTCGACCCCGTAATCTCGCCTGGTTCAACCAGTCCTGTCTTTTGCCAAGACTCTTAATTCCGGTGGAATC GGCGATGGGAGAAACCCGTGTTGCGGCCTCGCCGGACACGGTGAAGAAGTTTCTTTCTCTGGGCAGCAAGGTTGCCATTG AGCGTGGCGCCGGCCTTGCCGCAGGTTTTGTTGATGGTGATTTCAACACCATTGGTGCGGAGCTGGTTGCTCCGGGAGAT TCACAGGCCTGGAGCGAGGCCGATGTCGTCCTATGCGTTCAATCTCCTTCTGCTAGTGCTTTGGCAAGGATGCGATCTGG GGCCCTTGTTGTTGGTTTGTTGGCGCCTTATGCCAACAGTTCTTTAGCAGCGTCGCTGAAGACAGCAAAGCTCTCAGCGA TGGCCCTAGAGCTGCTGCCGAGAATTAGCCGGGCACAGTCTGCGGATGCCCTTTCCTCTCAGGCCAATATTGCTGGCTAC AAGGCGGTGCTGTTGGCTGCTGCTGCCCTTGATCGTTACTTTCCGATGTTGATGACGGCAGCTGGCACGGTGCAGCCAGC GCGGGTCGTGGTCTTAGGTGCTGGTGTGGCTGGATTGCAGGCAGTTGCTACAGCAAAGCGTCTGGGTGCTGTGGTCTATG TCAGTGATGTCCGCTCTGCCGTGAAGGAGCAGGTGGAGTCACTTGGGGCACGCTTTATCGAACCTCCTGAAATTGATCAG AGGCCAGATGAGTCTGGTGGCTATGCCAAGCAGGCTTCTGAGGCTTTTTTGACGGCTCAGCGTGAGCAGCTCTCCAACCA GTTAGCGCAAGCCGATGTGGTGATCTGTACTGCTCAGGTGCCTGGTCGAAAAGCTCCACGATTAATTAGTGATCTCATGC TCGATCGCATGCGCCCAGGTGCTGTGGTGGTCGATCTTGCCGTTGAACAGGGTGGAAATTGTGCGAATACTCGTCCTGGT GAAACAGTCGATCGCAATGGCGTGAAGTTGATCGGTGCCTCCGATCTCCCTTGCAGTGTTCCCAATCACGCCAGTGCTCT TTACTCTCGCAATTTGGTCGCTCTGTTGGAGCCCGTTTTGAAGGATGGTCAGCTCAGTTTGAACATTGAGGATGAGTTAA TTGCCGGATGCCTGATCAGTCACAACGGTGTTATTCGCCATGACGATGTGCTTAACACAGGAGGGTCCAACTGA
Upstream 100 bases:
>100_bases GACATTCGATTGCAGTTAGGCCCATGGAGGGAGTTGGAGTTAACAATCCTTCTTAGCTATAAAGCCAGCTGAAAAACTCT TTTCTTCAGGAAAGCTCCCG
Downstream 100 bases:
>100_bases TGTCGTTCTTGAGTGAGGCCCTTTGGGTGCTGCTGCTTGGCAGCTTGCTTGGCCTTGAACTGATCGGCAAGGTGCCTCCC ACTTTGCATACGCCTTTGAT
Product: nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1)
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPGGRPRNLAWFNQSCLLPRLLIPVESAMGETRVAASPDTVKKFLSLGSKVAIERGAGLAAGFVDGDFNTIGAELVAPGD SQAWSEADVVLCVQSPSASALARMRSGALVVGLLAPYANSSLAASLKTAKLSAMALELLPRISRAQSADALSSQANIAGY KAVLLAAAALDRYFPMLMTAAGTVQPARVVVLGAGVAGLQAVATAKRLGAVVYVSDVRSAVKEQVESLGARFIEPPEIDQ RPDESGGYAKQASEAFLTAQREQLSNQLAQADVVICTAQVPGRKAPRLISDLMLDRMRPGAVVVDLAVEQGGNCANTRPG ETVDRNGVKLIGASDLPCSVPNHASALYSRNLVALLEPVLKDGQLSLNIEDELIAGCLISHNGVIRHDDVLNTGGSN
Sequences:
>Translated_397_residues MPGGRPRNLAWFNQSCLLPRLLIPVESAMGETRVAASPDTVKKFLSLGSKVAIERGAGLAAGFVDGDFNTIGAELVAPGD SQAWSEADVVLCVQSPSASALARMRSGALVVGLLAPYANSSLAASLKTAKLSAMALELLPRISRAQSADALSSQANIAGY KAVLLAAAALDRYFPMLMTAAGTVQPARVVVLGAGVAGLQAVATAKRLGAVVYVSDVRSAVKEQVESLGARFIEPPEIDQ RPDESGGYAKQASEAFLTAQREQLSNQLAQADVVICTAQVPGRKAPRLISDLMLDRMRPGAVVVDLAVEQGGNCANTRPG ETVDRNGVKLIGASDLPCSVPNHASALYSRNLVALLEPVLKDGQLSLNIEDELIAGCLISHNGVIRHDDVLNTGGSN >Mature_396_residues PGGRPRNLAWFNQSCLLPRLLIPVESAMGETRVAASPDTVKKFLSLGSKVAIERGAGLAAGFVDGDFNTIGAELVAPGDS QAWSEADVVLCVQSPSASALARMRSGALVVGLLAPYANSSLAASLKTAKLSAMALELLPRISRAQSADALSSQANIAGYK AVLLAAAALDRYFPMLMTAAGTVQPARVVVLGAGVAGLQAVATAKRLGAVVYVSDVRSAVKEQVESLGARFIEPPEIDQR PDESGGYAKQASEAFLTAQREQLSNQLAQADVVICTAQVPGRKAPRLISDLMLDRMRPGAVVVDLAVEQGGNCANTRPGE TVDRNGVKLIGASDLPCSVPNHASALYSRNLVALLEPVLKDGQLSLNIEDELIAGCLISHNGVIRHDDVLNTGGSN
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=381, Percent_Identity=37.7952755905512, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI122939153, Length=381, Percent_Identity=37.7952755905512, Blast_Score=240, Evalue=2e-63, Organism=Escherichia coli, GI1787887, Length=369, Percent_Identity=44.7154471544715, Blast_Score=291, Evalue=4e-80, Organism=Caenorhabditis elegans, GI17550456, Length=367, Percent_Identity=41.6893732970027, Blast_Score=284, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 41339; Mature: 41208
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGRPRNLAWFNQSCLLPRLLIPVESAMGETRVAASPDTVKKFLSLGSKVAIERGAGLA CCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEEECCCCEE AGFVDGDFNTIGAELVAPGDSQAWSEADVVLCVQSPSASALARMRSGALVVGLLAPYANS EEEECCCCHHCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCC SLAASLKTAKLSAMALELLPRISRAQSADALSSQANIAGYKAVLLAAAALDRYFPMLMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGTVQPARVVVLGAGVAGLQAVATAKRLGAVVYVSDVRSAVKEQVESLGARFIEPPEIDQ CCCCCCCEEEEEECCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC RPDESGGYAKQASEAFLTAQREQLSNQLAQADVVICTAQVPGRKAPRLISDLMLDRMRPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCC AVVVDLAVEQGGNCANTRPGETVDRNGVKLIGASDLPCSVPNHASALYSRNLVALLEPVL CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHH KDGQLSLNIEDELIAGCLISHNGVIRHDDVLNTGGSN CCCEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCC >Mature Secondary Structure PGGRPRNLAWFNQSCLLPRLLIPVESAMGETRVAASPDTVKKFLSLGSKVAIERGAGLA CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEEECCCCEE AGFVDGDFNTIGAELVAPGDSQAWSEADVVLCVQSPSASALARMRSGALVVGLLAPYANS EEEECCCCHHCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCC SLAASLKTAKLSAMALELLPRISRAQSADALSSQANIAGYKAVLLAAAALDRYFPMLMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGTVQPARVVVLGAGVAGLQAVATAKRLGAVVYVSDVRSAVKEQVESLGARFIEPPEIDQ CCCCCCCEEEEEECCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC RPDESGGYAKQASEAFLTAQREQLSNQLAQADVVICTAQVPGRKAPRLISDLMLDRMRPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCC AVVVDLAVEQGGNCANTRPGETVDRNGVKLIGASDLPCSVPNHASALYSRNLVALLEPVL CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHH KDGQLSLNIEDELIAGCLISHNGVIRHDDVLNTGGSN CCCEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]