| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is por [H]
Identifier: 124022501
GI number: 124022501
Start: 725380
End: 726384
Strand: Direct
Name: por [H]
Synonym: P9303_07921
Alternate gene names: 124022501
Gene position: 725380-726384 (Clockwise)
Preceding gene: 124022500
Following gene: 124022505
Centisome position: 27.04
GC content: 50.95
Gene sequence:
>1005_bases ATGGCTTCTTCTCAAGCTTCTCCAGGCACCGTCTTAATCACGGGCACGACCTCTGGAGTCGGGTTGTATGCCTGCAAGGC ACTCGTCTATCGAGGCTGGCAGGTGATCACTGCAAATCGACATCCATTGCGAGCTGTTGCCGCTGCCGAGAGGGTAGGCA TCCCAGCCGCTCAACTTCAGCATCTAAGGATGGATTTGAGTGATCTCCAGAGCGTTCGCGATGGAGTCGAGACCCTTCTC GGTTCGCTCGAACAACCGCTGGATGCACTTGTTTGTAATGCCGCGGTCTATCAGCCCAGGCTGCGCAAGCCGAAACGCTC AGCTCAGGGCTATGAGCTCTCGATGGCAACCAATCATTTTGGGCATTTCTTGCTGATTCAACTTTTGCTTGAGAACCTCG GCAAAGCAAAAGTATTTCAATCAGCGCGTGGCTCTTATTTGTCTGCTGCCCGAGTGGTCATTCTTGGCACAGTTACAGCT AATTATAAGGAGCTTGGCGGCAAGATCCCCATTCCTGCACCGGCTGATCTGGGTAATCTTTCAGGTTTTGAGCAAGGGTT TCATGCGCCTATCAGTATGGCGAGTGGCAAAAGCTTCAAGCCTGGCAAGGCATATAAAGACAGCAAGCTCTGCAACATGA TCACCACGCAGGAGCTCCATCGGCGCCTACATGAAGAATCAGGGATTTTATTTACCTCTCTTTATCCTGGTTGTGTGGCT GATACACCGTTATTCCGCTACACACCGAAAATCTTCCGATTTTTGTTTCCTATATTCCAGAGGCTGATTACTGGTGGATA TGTCACCCAGGCCAAGGCTGGTCAGCGGGTTGCACAGGTTGTCACCAATCCAGAGTTCGGTGTATCAGGCGTGCATTGGA GTTGGGGTAATCGTCAGAAGAAGAACCGCGAAAGTTTCCGACAGGAACTATCGGAAAGGGCGACAGATCCCATCACCGCA AAACGGGTCTGGGAATTGTCGATGAAATTGGTTGGTTTGACTTAA
Upstream 100 bases:
>100_bases AGGGTCATCTGGCGCTGAGTTTTGTTTTGCTTGCGTCGAGAGTGAAGCTCAGCGCTTAGTTTTATAGCTATACCAACCTG CTGCTCTAAAGGCTGCGTCG
Downstream 100 bases:
>100_bases ATGATCAAGGGCTTTGCTTCTTTTAGAGGTTAGTCAAAGCCAAGCAGGTCAAAAATTTCACGATCTTTGAGAGGTTCCGC TTCAAGAGGCTCAACCTTAT
Product: protochlorophyllide oxidoreductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MASSQASPGTVLITGTTSGVGLYACKALVYRGWQVITANRHPLRAVAAAERVGIPAAQLQHLRMDLSDLQSVRDGVETLL GSLEQPLDALVCNAAVYQPRLRKPKRSAQGYELSMATNHFGHFLLIQLLLENLGKAKVFQSARGSYLSAARVVILGTVTA NYKELGGKIPIPAPADLGNLSGFEQGFHAPISMASGKSFKPGKAYKDSKLCNMITTQELHRRLHEESGILFTSLYPGCVA DTPLFRYTPKIFRFLFPIFQRLITGGYVTQAKAGQRVAQVVTNPEFGVSGVHWSWGNRQKKNRESFRQELSERATDPITA KRVWELSMKLVGLT
Sequences:
>Translated_334_residues MASSQASPGTVLITGTTSGVGLYACKALVYRGWQVITANRHPLRAVAAAERVGIPAAQLQHLRMDLSDLQSVRDGVETLL GSLEQPLDALVCNAAVYQPRLRKPKRSAQGYELSMATNHFGHFLLIQLLLENLGKAKVFQSARGSYLSAARVVILGTVTA NYKELGGKIPIPAPADLGNLSGFEQGFHAPISMASGKSFKPGKAYKDSKLCNMITTQELHRRLHEESGILFTSLYPGCVA DTPLFRYTPKIFRFLFPIFQRLITGGYVTQAKAGQRVAQVVTNPEFGVSGVHWSWGNRQKKNRESFRQELSERATDPITA KRVWELSMKLVGLT >Mature_333_residues ASSQASPGTVLITGTTSGVGLYACKALVYRGWQVITANRHPLRAVAAAERVGIPAAQLQHLRMDLSDLQSVRDGVETLLG SLEQPLDALVCNAAVYQPRLRKPKRSAQGYELSMATNHFGHFLLIQLLLENLGKAKVFQSARGSYLSAARVVILGTVTAN YKELGGKIPIPAPADLGNLSGFEQGFHAPISMASGKSFKPGKAYKDSKLCNMITTQELHRRLHEESGILFTSLYPGCVAD TPLFRYTPKIFRFLFPIFQRLITGGYVTQAKAGQRVAQVVTNPEFGVSGVHWSWGNRQKKNRESFRQELSERATDPITAK RVWELSMKLVGLT
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706523, Length=324, Percent_Identity=27.1604938271605, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI186928839, Length=331, Percent_Identity=29.0030211480363, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI10190746, Length=341, Percent_Identity=28.7390029325513, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI166795268, Length=333, Percent_Identity=27.9279279279279, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193207620, Length=337, Percent_Identity=29.673590504451, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17532805, Length=332, Percent_Identity=26.5060240963855, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71992402, Length=318, Percent_Identity=26.4150943396226, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32565532, Length=243, Percent_Identity=27.1604938271605, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45553409, Length=329, Percent_Identity=27.9635258358663, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647948, Length=329, Percent_Identity=27.9635258358663, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647946, Length=329, Percent_Identity=27.9635258358663, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI20129347, Length=327, Percent_Identity=26.9113149847095, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24586328, Length=323, Percent_Identity=27.5541795665635, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI22024069, Length=333, Percent_Identity=30.03003003003, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 36657; Mature: 36526
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSQASPGTVLITGTTSGVGLYACKALVYRGWQVITANRHPLRAVAAAERVGIPAAQLQ CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHH HLRMDLSDLQSVRDGVETLLGSLEQPLDALVCNAAVYQPRLRKPKRSAQGYELSMATNHF HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEHHHHH GHFLLIQLLLENLGKAKVFQSARGSYLSAARVVILGTVTANYKELGGKIPIPAPADLGNL HHHHHHHHHHHHCCHHHHHHHHCCCHHHHCEEEEEEECCCCHHHCCCCCCCCCCCCCCCC SGFEQGFHAPISMASGKSFKPGKAYKDSKLCNMITTQELHRRLHEESGILFTSLYPGCVA CCHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHC DTPLFRYTPKIFRFLFPIFQRLITGGYVTQAKAGQRVAQVVTNPEFGVSGVHWSWGNRQK CCCHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCH KNRESFRQELSERATDPITAKRVWELSMKLVGLT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASSQASPGTVLITGTTSGVGLYACKALVYRGWQVITANRHPLRAVAAAERVGIPAAQLQ CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHH HLRMDLSDLQSVRDGVETLLGSLEQPLDALVCNAAVYQPRLRKPKRSAQGYELSMATNHF HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEHHHHH GHFLLIQLLLENLGKAKVFQSARGSYLSAARVVILGTVTANYKELGGKIPIPAPADLGNL HHHHHHHHHHHHCCHHHHHHHHCCCHHHHCEEEEEEECCCCHHHCCCCCCCCCCCCCCCC SGFEQGFHAPISMASGKSFKPGKAYKDSKLCNMITTQELHRRLHEESGILFTSLYPGCVA CCHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHC DTPLFRYTPKIFRFLFPIFQRLITGGYVTQAKAGQRVAQVVTNPEFGVSGVHWSWGNRQK CCCHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCH KNRESFRQELSERATDPITAKRVWELSMKLVGLT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]