Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 124022505

GI number: 124022505

Start: 730570

End: 732291

Strand: Direct

Name: yvdB [H]

Synonym: P9303_07961

Alternate gene names: 124022505

Gene position: 730570-732291 (Clockwise)

Preceding gene: 124022501

Following gene: 124022506

Centisome position: 27.23

GC content: 50.64

Gene sequence:

>1722_bases
TTGGCATTGATCCATGGATTTCATCTGCGCAATGTTCGCGGAGATCTATTAGGCGGATTGACCGCTGCGGTGGTGGCGCT
GCCTTTAGCCCTCGCATTTGGTAATGCTGCCCTTGGCGATGGAGGCGCGATCTACGGTCTCTACGGAGCAGTGATTGTTG
GCTTCTTCGCAGCGCTGTTTGGAGGCACTCCATCTCAGGTCAGCGGTCCAACAGGACCGATGAGCGTCACCGTGGCAGGA
GTGGTCGCGGCTCTTGCTGCTGTTGGTATCTCCACAGCGTTGCCAACGGTTGATGGTCCAGGCGAGCTTTTGCCCCTGGT
TATGGCCGCAGTGGTTGTTGGAGGTCTATTCCAAATTCTGTTTGGGGTCTTACGACTGGGTCGTTACATCACGCTTGTGC
CCTATTCAGTGGTGTCTGGCTTCATGTCTGGGATTGGGGTGATCATCCTCATTCTTCAGATTGGACCTCTTTTTGGTATC
TCAACCAAGGGCGGTGTGATTGCTTGCCTTACGCAGTTATCGGCAAACTTTCAACCCAACTGGGGCGCGGTAGCAGTGGC
TGTGATGACCTTGGCCATTGTCTTTTTGGCACCTCGGCGTCTCACCGAGTGGGTGCCTTCACCGTTGTTGGCTTTGTTGA
TCGTTACGCCTCTCTCGGTTGTGCTGTTCAATGACGCGAACCTGGCAGCCCGAGGCATCGATGAGCTGCCGCGTATTGGC
ACGATCCCTGACGGTGGCCTGGGCTTTTCTTTGCCCAGCTGGGACCCAGCATTTCTTCCATTGATCATCAAATCAGGCTT
AGTGCTTGCAGTGTTGGGAGCAATCGATTCGCTGTTGACATCACTGGTTGCAGACAACATTACCCAGACTCGTCATAACT
CAGACCGAGAGCTGATTGGCCAAGGAATTGGCAACTCTCTTGCTGGGCTGTTTAACGGATTGCCTGGCGCCGGTGCAACC
ATGCGGACGGTGATCAATGTCAAATCTGGAGGCAGCACGCCACTCTCTGGAATGGTGCATTCCATTGTGCTGTTGATTGT
TTTGTATGGAGCAGGTCAGTTCGCGGCTTTAATTCCAACTGCCTTGCTTGCAGGAATATTGGTCAAGGTAGGTCTCGACA
TCATTGATTGGGGCTTCTTGCTTAGAGCTCATCGACTTTCTATCAAAACAGCTGTTGTCATGTATGGCGTCTTGCTGATG
ACAGTCTTCTGGGATTTAATCTCAGCAGTTTTGGTTGGTGTGTTTGTTGCAAACCTATTAACCATTGATTCTTTGACACA
AGCGCAATTGGAAGGAATGGATGCCGATAATCGTTTGATGGATGGTGATTTTGACAACAATTCAACTAGTGCTTACGCTA
ATACTGAAGAGCCATCTTTGCCTCCTTCAGAACAAGCATTGCTTGATCGCTGTGGCGGGCAGGTGATGTTATTCCGTCTG
CGTGGACCATTGAGCTTTGGAGCTGCTTCGGGGATCACAGAACGAATGGCTCTGGTACGTAATTACAAGGTTTTGATCCT
TGATATTACTGAAGTTCCTCGGCTTGGCATTACTGCAACTTTGGCCATTGAACAGATGGTTCAAGAGGCGAAAAACCATT
CAAGGAAAGCTTATGTTGTTGCTGCAAACGAGAGGGTCCGCAAGAGACTTGAGAAGTTTGATGTGCAAGGGTTGATGGCT
AATCGAACCCAAGCTCTTGAAGCCGCCCTGGCTGACTTATAA

Upstream 100 bases:

>100_bases
TTTGTTATAGAGGCCAGACAAATTGCTTCTCTTGCCATACAGGAGGGGCCCACAGCCAGATATTGTTTTGTTCAAGTCAA
GTGGGCAGGAGCACTACGTT

Downstream 100 bases:

>100_bases
GAGTAAGTGACAACTTATCAAAGATCCCAGCCTCATGAGAATACCTTCTGGGGTTGGGATCTTTGATAAAAATAATGATA
TAATCTACTTTGTGAAATCT

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MALIHGFHLRNVRGDLLGGLTAAVVALPLALAFGNAALGDGGAIYGLYGAVIVGFFAALFGGTPSQVSGPTGPMSVTVAG
VVAALAAVGISTALPTVDGPGELLPLVMAAVVVGGLFQILFGVLRLGRYITLVPYSVVSGFMSGIGVIILILQIGPLFGI
STKGGVIACLTQLSANFQPNWGAVAVAVMTLAIVFLAPRRLTEWVPSPLLALLIVTPLSVVLFNDANLAARGIDELPRIG
TIPDGGLGFSLPSWDPAFLPLIIKSGLVLAVLGAIDSLLTSLVADNITQTRHNSDRELIGQGIGNSLAGLFNGLPGAGAT
MRTVINVKSGGSTPLSGMVHSIVLLIVLYGAGQFAALIPTALLAGILVKVGLDIIDWGFLLRAHRLSIKTAVVMYGVLLM
TVFWDLISAVLVGVFVANLLTIDSLTQAQLEGMDADNRLMDGDFDNNSTSAYANTEEPSLPPSEQALLDRCGGQVMLFRL
RGPLSFGAASGITERMALVRNYKVLILDITEVPRLGITATLAIEQMVQEAKNHSRKAYVVAANERVRKRLEKFDVQGLMA
NRTQALEAALADL

Sequences:

>Translated_573_residues
MALIHGFHLRNVRGDLLGGLTAAVVALPLALAFGNAALGDGGAIYGLYGAVIVGFFAALFGGTPSQVSGPTGPMSVTVAG
VVAALAAVGISTALPTVDGPGELLPLVMAAVVVGGLFQILFGVLRLGRYITLVPYSVVSGFMSGIGVIILILQIGPLFGI
STKGGVIACLTQLSANFQPNWGAVAVAVMTLAIVFLAPRRLTEWVPSPLLALLIVTPLSVVLFNDANLAARGIDELPRIG
TIPDGGLGFSLPSWDPAFLPLIIKSGLVLAVLGAIDSLLTSLVADNITQTRHNSDRELIGQGIGNSLAGLFNGLPGAGAT
MRTVINVKSGGSTPLSGMVHSIVLLIVLYGAGQFAALIPTALLAGILVKVGLDIIDWGFLLRAHRLSIKTAVVMYGVLLM
TVFWDLISAVLVGVFVANLLTIDSLTQAQLEGMDADNRLMDGDFDNNSTSAYANTEEPSLPPSEQALLDRCGGQVMLFRL
RGPLSFGAASGITERMALVRNYKVLILDITEVPRLGITATLAIEQMVQEAKNHSRKAYVVAANERVRKRLEKFDVQGLMA
NRTQALEAALADL
>Mature_572_residues
ALIHGFHLRNVRGDLLGGLTAAVVALPLALAFGNAALGDGGAIYGLYGAVIVGFFAALFGGTPSQVSGPTGPMSVTVAGV
VAALAAVGISTALPTVDGPGELLPLVMAAVVVGGLFQILFGVLRLGRYITLVPYSVVSGFMSGIGVIILILQIGPLFGIS
TKGGVIACLTQLSANFQPNWGAVAVAVMTLAIVFLAPRRLTEWVPSPLLALLIVTPLSVVLFNDANLAARGIDELPRIGT
IPDGGLGFSLPSWDPAFLPLIIKSGLVLAVLGAIDSLLTSLVADNITQTRHNSDRELIGQGIGNSLAGLFNGLPGAGATM
RTVINVKSGGSTPLSGMVHSIVLLIVLYGAGQFAALIPTALLAGILVKVGLDIIDWGFLLRAHRLSIKTAVVMYGVLLMT
VFWDLISAVLVGVFVANLLTIDSLTQAQLEGMDADNRLMDGDFDNNSTSAYANTEEPSLPPSEQALLDRCGGQVMLFRLR
GPLSFGAASGITERMALVRNYKVLILDITEVPRLGITATLAIEQMVQEAKNHSRKAYVVAANERVRKRLEKFDVQGLMAN
RTQALEAALADL

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827800, Length=445, Percent_Identity=23.8202247191011, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI39752683, Length=445, Percent_Identity=23.8202247191011, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI45827802, Length=445, Percent_Identity=23.8202247191011, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4557535, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI269784651, Length=392, Percent_Identity=23.7244897959184, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI94721259, Length=496, Percent_Identity=23.5887096774194, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI94721255, Length=496, Percent_Identity=23.5887096774194, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI94721253, Length=496, Percent_Identity=23.5887096774194, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI94721257, Length=496, Percent_Identity=23.5887096774194, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI20336282, Length=418, Percent_Identity=23.2057416267943, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI16306483, Length=418, Percent_Identity=23.2057416267943, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4505697, Length=387, Percent_Identity=23.7726098191214, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI16418457, Length=283, Percent_Identity=25.7950530035336, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI301601599, Length=283, Percent_Identity=25.7950530035336, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87081859, Length=440, Percent_Identity=29.5454545454545, Blast_Score=145, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17566848, Length=431, Percent_Identity=26.4501160092807, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86564876, Length=614, Percent_Identity=22.1498371335505, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203292, Length=438, Percent_Identity=24.6575342465753, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI86564196, Length=432, Percent_Identity=25.6944444444444, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17551690, Length=386, Percent_Identity=20.7253886010363, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI86565215, Length=547, Percent_Identity=22.3034734917733, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6325260, Length=594, Percent_Identity=21.2121212121212, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI85815873, Length=490, Percent_Identity=24.8979591836735, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24647160, Length=401, Percent_Identity=22.6932668329177, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355087, Length=401, Percent_Identity=22.6932668329177, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24666186, Length=418, Percent_Identity=25.8373205741627, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649801, Length=408, Percent_Identity=23.2843137254902, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24651449, Length=407, Percent_Identity=23.8329238329238, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59810; Mature: 59679

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALIHGFHLRNVRGDLLGGLTAAVVALPLALAFGNAALGDGGAIYGLYGAVIVGFFAALF
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GGTPSQVSGPTGPMSVTVAGVVAALAAVGISTALPTVDGPGELLPLVMAAVVVGGLFQIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGVLRLGRYITLVPYSVVSGFMSGIGVIILILQIGPLFGISTKGGVIACLTQLSANFQPN
HHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
WGAVAVAVMTLAIVFLAPRRLTEWVPSPLLALLIVTPLSVVLFNDANLAARGIDELPRIG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCHHHCCHHHCCCCC
TIPDGGLGFSLPSWDPAFLPLIIKSGLVLAVLGAIDSLLTSLVADNITQTRHNSDRELIG
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QGIGNSLAGLFNGLPGAGATMRTVINVKSGGSTPLSGMVHSIVLLIVLYGAGQFAALIPT
HCCCHHHHHHHCCCCCCCCCEEHEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ALLAGILVKVGLDIIDWGFLLRAHRLSIKTAVVMYGVLLMTVFWDLISAVLVGVFVANLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIDSLTQAQLEGMDADNRLMDGDFDNNSTSAYANTEEPSLPPSEQALLDRCGGQVMLFRL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE
RGPLSFGAASGITERMALVRNYKVLILDITEVPRLGITATLAIEQMVQEAKNHSRKAYVV
CCCCCCCHHCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
AANERVRKRLEKFDVQGLMANRTQALEAALADL
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]