| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is fabG [H]
Identifier: 124022492
GI number: 124022492
Start: 718879
End: 719604
Strand: Direct
Name: fabG [H]
Synonym: P9303_07831
Alternate gene names: 124022492
Gene position: 718879-719604 (Clockwise)
Preceding gene: 124022491
Following gene: 124022493
Centisome position: 26.8
GC content: 52.48
Gene sequence:
>726_bases TTGGGCTGCATTCGCTCCTTGCCTACTGCCCTGATTACTGGAGCATCTCGCGGTATTGGGGAAGCAGCTGCGCGGTTGTT TGCAAATTCCGGTTGGGATTTGATGTTGGTAGCCCGCAGCCAAGATGCACTTCAGGCACTTTCCCAAGAGCTAAAAAGTA CAGGCCAGAATGTTCTTTTTAAATCAATCGATTTGGCTGATCCAGAAGCCATTGCTCCTGGTATCGAGGATTTGCTTGGA CAGGGCCATTGCCCATCGGTGTTGATCAACAATGCTGGGGCGGCTTGGACAGGGGATCTTCTATCCATGCCTTTGAAGCG TTGGCAATGGTTGCTTCAGATGAATCTCACTAGCGTCTTCCAGTTGTGTTCTGTTGTGGTGCCTGCGATGCGTACCAGCG GTGGATTGGTGATCAATGTGAGCAGTCATGCCTCTCGCAATGCTTTCCCACAGTGGGGTTCGTACTGCACCACCAAAGCA GCATTGGCTACTTTTACTAGTTGCTTGGCGGCGGAAGAGCGCAATCATGGGATACGTGCTTGCACCCTCACGCTTGGTGC GGTCAATACCCCTCTTTGGGATACTGAAACCGTGCAAAGTAGCTTCGACCGTGATGCCATGCTGTCTGTTGAGCAGGCGG CCGCCGCCCTTCTACACTTGGCTCAGCAGCCACCATCACAGGTGATTGAAGATCTCACTCTAATGCCAGCCACTGGCGCC TTTTAA
Upstream 100 bases:
>100_bases AGGTTAATCAGCTTCGCGAATCGCGGTATCGGAAATTCCGGGCTATGGGTCGTGTTCTCGATCCAAGCTCGTCGGAAACC GGCTTGCCTGCCTAGGGTGA
Downstream 100 bases:
>100_bases CCAGCCTTTAATGACTTCCATAATCCCAGCATCATCTAAAGACCTAGGTCAGCATCGCAATCGCAATGGCTTGCCTGGGA ATGGTCAGCCAAAAAATGAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MGCIRSLPTALITGASRGIGEAAARLFANSGWDLMLVARSQDALQALSQELKSTGQNVLFKSIDLADPEAIAPGIEDLLG QGHCPSVLINNAGAAWTGDLLSMPLKRWQWLLQMNLTSVFQLCSVVVPAMRTSGGLVINVSSHASRNAFPQWGSYCTTKA ALATFTSCLAAEERNHGIRACTLTLGAVNTPLWDTETVQSSFDRDAMLSVEQAAAALLHLAQQPPSQVIEDLTLMPATGA F
Sequences:
>Translated_241_residues MGCIRSLPTALITGASRGIGEAAARLFANSGWDLMLVARSQDALQALSQELKSTGQNVLFKSIDLADPEAIAPGIEDLLG QGHCPSVLINNAGAAWTGDLLSMPLKRWQWLLQMNLTSVFQLCSVVVPAMRTSGGLVINVSSHASRNAFPQWGSYCTTKA ALATFTSCLAAEERNHGIRACTLTLGAVNTPLWDTETVQSSFDRDAMLSVEQAAAALLHLAQQPPSQVIEDLTLMPATGA F >Mature_240_residues GCIRSLPTALITGASRGIGEAAARLFANSGWDLMLVARSQDALQALSQELKSTGQNVLFKSIDLADPEAIAPGIEDLLGQ GHCPSVLINNAGAAWTGDLLSMPLKRWQWLLQMNLTSVFQLCSVVVPAMRTSGGLVINVSSHASRNAFPQWGSYCTTKAA LATFTSCLAAEERNHGIRACTLTLGAVNTPLWDTETVQSSFDRDAMLSVEQAAAALLHLAQQPPSQVIEDLTLMPATGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=26.4550264550265, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7705925, Length=220, Percent_Identity=28.1818181818182, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI7705855, Length=183, Percent_Identity=28.9617486338798, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4557649, Length=188, Percent_Identity=28.7234042553192, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI142976729, Length=163, Percent_Identity=28.2208588957055, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI59889578, Length=178, Percent_Identity=26.9662921348315, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI38348362, Length=181, Percent_Identity=30.939226519337, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI38424085, Length=181, Percent_Identity=30.939226519337, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87082100, Length=218, Percent_Identity=31.651376146789, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787335, Length=184, Percent_Identity=30.9782608695652, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788459, Length=188, Percent_Identity=28.1914893617021, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI2367175, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787820, Length=245, Percent_Identity=24.4897959183673, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786701, Length=188, Percent_Identity=27.6595744680851, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71994604, Length=203, Percent_Identity=33.9901477832512, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71994600, Length=188, Percent_Identity=31.3829787234043, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17555706, Length=230, Percent_Identity=31.304347826087, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17562908, Length=197, Percent_Identity=30.4568527918782, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559104, Length=191, Percent_Identity=32.9842931937173, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562906, Length=197, Percent_Identity=30.4568527918782, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193204405, Length=194, Percent_Identity=31.9587628865979, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538480, Length=209, Percent_Identity=30.1435406698565, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560220, Length=198, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560150, Length=191, Percent_Identity=27.7486910994764, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17531453, Length=200, Percent_Identity=30, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562904, Length=195, Percent_Identity=31.7948717948718, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17551412, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17562910, Length=192, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997402, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562990, Length=186, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17560332, Length=192, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17538486, Length=189, Percent_Identity=30.1587301587302, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17563726, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=245, Percent_Identity=28.1632653061224, Blast_Score=93, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=27.5675675675676, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=191, Percent_Identity=27.7486910994764, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI23397609, Length=183, Percent_Identity=33.879781420765, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI116007236, Length=243, Percent_Identity=28.3950617283951, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571526, Length=229, Percent_Identity=28.3842794759825, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24639444, Length=188, Percent_Identity=29.2553191489362, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357041, Length=222, Percent_Identity=28.3783783783784, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24644339, Length=232, Percent_Identity=29.3103448275862, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24584752, Length=203, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24584748, Length=175, Percent_Identity=32, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI161076933, Length=175, Percent_Identity=32, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21358495, Length=189, Percent_Identity=27.5132275132275, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28571387, Length=244, Percent_Identity=29.0983606557377, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356301, Length=195, Percent_Identity=27.6923076923077, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641232, Length=241, Percent_Identity=26.5560165975104, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281364494, Length=244, Percent_Identity=25.4098360655738, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355319, Length=196, Percent_Identity=26.0204081632653, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643142, Length=183, Percent_Identity=31.1475409836066, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25596; Mature: 25464
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCIRSLPTALITGASRGIGEAAARLFANSGWDLMLVARSQDALQALSQELKSTGQNVLF CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHH KSIDLADPEAIAPGIEDLLGQGHCPSVLINNAGAAWTGDLLSMPLKRWQWLLQMNLTSVF HHCCCCCCHHHCCCHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLCSVVVPAMRTSGGLVINVSSHASRNAFPQWGSYCTTKAALATFTSCLAAEERNHGIRA HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE CTLTLGAVNTPLWDTETVQSSFDRDAMLSVEQAAAALLHLAQQPPSQVIEDLTLMPATGA EEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC F C >Mature Secondary Structure GCIRSLPTALITGASRGIGEAAARLFANSGWDLMLVARSQDALQALSQELKSTGQNVLF CCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHH KSIDLADPEAIAPGIEDLLGQGHCPSVLINNAGAAWTGDLLSMPLKRWQWLLQMNLTSVF HHCCCCCCHHHCCCHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLCSVVVPAMRTSGGLVINVSSHASRNAFPQWGSYCTTKAALATFTSCLAAEERNHGIRA HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE CTLTLGAVNTPLWDTETVQSSFDRDAMLSVEQAAAALLHLAQQPPSQVIEDLTLMPATGA EEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]