| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022481
Identifier: 124022481
GI number: 124022481
Start: 710286
End: 711962
Strand: Direct
Name: 124022481
Synonym: P9303_07721
Alternate gene names: NA
Gene position: 710286-711962 (Clockwise)
Preceding gene: 124022480
Following gene: 124022485
Centisome position: 26.48
GC content: 54.5
Gene sequence:
>1677_bases GTGTTGCGGTTGAGTGAGTTGAAGCTTCCCCTTGATCATTCGCCAGAGGCGATCGAAGCAGTCATCCTTAAGCGGTTGCG TATTCCGCCTTCCCAGCTCATCAATCACAGGCTGGTGAAACGAAGTATTGACGCTCGACGTCATGAGCGGATCCAGTTCA TCTACAGCGCGGATGTGAAGGTTCGAGGGGAAGCTGCTCTGTTGAAACGCCACGCAGGCAATCAAAAGATTCGTAAGGCT CCAGACACCCGCTATTACCCAGTTGCGCAGGCGCCAACAGATTTCCCTCAAGTAGAAACGCAGCGGCCGGTTGTGGTGGG TGCAGGCCCTTGTGGTTACTTTGCAGCTCTGCTTCTGGCACAGATGGGTTTCAAGCCTTTGCTGTTGGAGCGTGGTCAGT CGATCAAAAAGCGCACGCTAGAAACTTTTGCTTTCTGGAGGGGGCAGCGGCCTTTCAATCCTGATTCCAATGCCCAATTC GGTGAAGGTGGGGCGGGGACTTTCTCAGACGGAAAGCTTTATAGCCAGGTGAGTGACCCTGAACACTATGGGCGCAAGGT GTTTGAAGAATTGGTGGCCAGTGGAGCCAATCCAGAGATCCTTACGGTGCACCGCCCTCACATTGGCACCTACAAATTGG CCACGGTGGTGCGTGGAATGCGCGCCAGAATTGAGGAGCTTGGTGGTGAGATTCGATTTGAGACTCGAGTTGATGAATTG CTGCTGCTGCGAGATTTAGATCATTCACGATCCGGCAAGCCTTTGCAGGTGGTAGGGCTGAAGCTTGCCGATGGCAGCAC AATTAGCAGTCGGTATGTGTTATTTGCCCTGGGTCATTCAGCACGGGACAGCTTCGCCATGTTGGAAAGGGTTGGCGTGA AGCTTGAAGCCAAGCCCTTTTCTGTAGGACTCCGCATCGAACACCCCCAGCCTCTGATCGATCGCGCGCGCTGGGGGCCA ATGGTGGGTCATCCACAACTCGGCCATGCGGAATACAAGTTGGTGCATCACGCTCGTAATGGCCGCTCTGTCTATAGCTT CTGCATGTGTCCGGGTGGAGTTGTGGTGGGTGCTACATCGCAAGCAGATTGCGTGGTTACCAATGGCATGAGTCAACACA CACGCAATGAACGCAATGCCAACAGTGCCTTGGTTGTGAATTTGGAGCATCAGGATTTGTGCAGTTATGAGCGTTGGCCA GGAGATCCTCTGGCAGGAGTGGCCCTGCAGCATGAGTTGGAACGAAGGGCTTTTCAGCTTGGAGGGGGTGGATATTGTGC CCCTGCTCAGCGCCAGGAGGATTTTCTTGCGGGCAGGCCTACAACTTGCCTCGGTGAGGTAACGCCCTCTTATCTGCCAG GAATCAAGCTGGTTGACCTCAATCAGATGTTGCCGGCTCCGTTGATTGAGGCTTTAAGAGAGGCCTTGCCGGCCTTCGCT AGGCGTTTGCCAGGCTATGAGCATCCTGATGCTGTACTCACTGGGGTTGAGACCCGTACCTCATCGCCTGTGCGTATTCC CAGGGATAACTCCTTTGAGTCGCTTAACACCACTGGGCTGATTCCTGCTGGAGAAGGGGCTGGTTATGCCGGAGGCATCC TTTCGGCTGGCATCGATGGGATTAGGGCTGCAGAAGCCCTGGCGAAACAGCTTGTGGTTGTTCATTCTCCAGCTTGA
Upstream 100 bases:
>100_bases CGAGTTTCTGCTTTGGGGCCTGGCTGAGGCAAGACTCGAATCTGCTGCGATTGAATCAGGATTGGATGGAGCTGATGCGC TTTACGTGTGAGGTGATGAC
Downstream 100 bases:
>100_bases GCGACGATTCCACTCCACTGCACGGCTTTGACGTGGTCCCTGCGCCATGAGTAAAAGAGGCTGGACTCTGCCACTGTGCA TAGCGGGCAACTGCTGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MLRLSELKLPLDHSPEAIEAVILKRLRIPPSQLINHRLVKRSIDARRHERIQFIYSADVKVRGEAALLKRHAGNQKIRKA PDTRYYPVAQAPTDFPQVETQRPVVVGAGPCGYFAALLLAQMGFKPLLLERGQSIKKRTLETFAFWRGQRPFNPDSNAQF GEGGAGTFSDGKLYSQVSDPEHYGRKVFEELVASGANPEILTVHRPHIGTYKLATVVRGMRARIEELGGEIRFETRVDEL LLLRDLDHSRSGKPLQVVGLKLADGSTISSRYVLFALGHSARDSFAMLERVGVKLEAKPFSVGLRIEHPQPLIDRARWGP MVGHPQLGHAEYKLVHHARNGRSVYSFCMCPGGVVVGATSQADCVVTNGMSQHTRNERNANSALVVNLEHQDLCSYERWP GDPLAGVALQHELERRAFQLGGGGYCAPAQRQEDFLAGRPTTCLGEVTPSYLPGIKLVDLNQMLPAPLIEALREALPAFA RRLPGYEHPDAVLTGVETRTSSPVRIPRDNSFESLNTTGLIPAGEGAGYAGGILSAGIDGIRAAEALAKQLVVVHSPA
Sequences:
>Translated_558_residues MLRLSELKLPLDHSPEAIEAVILKRLRIPPSQLINHRLVKRSIDARRHERIQFIYSADVKVRGEAALLKRHAGNQKIRKA PDTRYYPVAQAPTDFPQVETQRPVVVGAGPCGYFAALLLAQMGFKPLLLERGQSIKKRTLETFAFWRGQRPFNPDSNAQF GEGGAGTFSDGKLYSQVSDPEHYGRKVFEELVASGANPEILTVHRPHIGTYKLATVVRGMRARIEELGGEIRFETRVDEL LLLRDLDHSRSGKPLQVVGLKLADGSTISSRYVLFALGHSARDSFAMLERVGVKLEAKPFSVGLRIEHPQPLIDRARWGP MVGHPQLGHAEYKLVHHARNGRSVYSFCMCPGGVVVGATSQADCVVTNGMSQHTRNERNANSALVVNLEHQDLCSYERWP GDPLAGVALQHELERRAFQLGGGGYCAPAQRQEDFLAGRPTTCLGEVTPSYLPGIKLVDLNQMLPAPLIEALREALPAFA RRLPGYEHPDAVLTGVETRTSSPVRIPRDNSFESLNTTGLIPAGEGAGYAGGILSAGIDGIRAAEALAKQLVVVHSPA >Mature_558_residues MLRLSELKLPLDHSPEAIEAVILKRLRIPPSQLINHRLVKRSIDARRHERIQFIYSADVKVRGEAALLKRHAGNQKIRKA PDTRYYPVAQAPTDFPQVETQRPVVVGAGPCGYFAALLLAQMGFKPLLLERGQSIKKRTLETFAFWRGQRPFNPDSNAQF GEGGAGTFSDGKLYSQVSDPEHYGRKVFEELVASGANPEILTVHRPHIGTYKLATVVRGMRARIEELGGEIRFETRVDEL LLLRDLDHSRSGKPLQVVGLKLADGSTISSRYVLFALGHSARDSFAMLERVGVKLEAKPFSVGLRIEHPQPLIDRARWGP MVGHPQLGHAEYKLVHHARNGRSVYSFCMCPGGVVVGATSQADCVVTNGMSQHTRNERNANSALVVNLEHQDLCSYERWP GDPLAGVALQHELERRAFQLGGGGYCAPAQRQEDFLAGRPTTCLGEVTPSYLPGIKLVDLNQMLPAPLIEALREALPAFA RRLPGYEHPDAVLTGVETRTSSPVRIPRDNSFESLNTTGLIPAGEGAGYAGGILSAGIDGIRAAEALAKQLVVVHSPA
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 61173; Mature: 61173
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLSELKLPLDHSPEAIEAVILKRLRIPPSQLINHRLVKRSIDARRHERIQFIYSADVK CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCEE VRGEAALLKRHAGNQKIRKAPDTRYYPVAQAPTDFPQVETQRPVVVGAGPCGYFAALLLA ECCHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH QMGFKPLLLERGQSIKKRTLETFAFWRGQRPFNPDSNAQFGEGGAGTFSDGKLYSQVSDP HCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH EHYGRKVFEELVASGANPEILTVHRPHIGTYKLATVVRGMRARIEELGGEIRFETRVDEL HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH LLLRDLDHSRSGKPLQVVGLKLADGSTISSRYVLFALGHSARDSFAMLERVGVKLEAKPF HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCE SVGLRIEHPQPLIDRARWGPMVGHPQLGHAEYKLVHHARNGRSVYSFCMCPGGVVVGATS EEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCC QADCVVTNGMSQHTRNERNANSALVVNLEHQDLCSYERWPGDPLAGVALQHELERRAFQL CCCEEEECCCHHHHCCCCCCCCEEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC GGGGYCAPAQRQEDFLAGRPTTCLGEVTPSYLPGIKLVDLNQMLPAPLIEALREALPAFA CCCCCCCCCCCCHHHHCCCCCCCHHCCCHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHH RRLPGYEHPDAVLTGVETRTSSPVRIPRDNSFESLNTTGLIPAGEGAGYAGGILSAGIDG HHCCCCCCCCHHEECCCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCCH IRAAEALAKQLVVVHSPA HHHHHHHHHCEEEEECCC >Mature Secondary Structure MLRLSELKLPLDHSPEAIEAVILKRLRIPPSQLINHRLVKRSIDARRHERIQFIYSADVK CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCEE VRGEAALLKRHAGNQKIRKAPDTRYYPVAQAPTDFPQVETQRPVVVGAGPCGYFAALLLA ECCHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH QMGFKPLLLERGQSIKKRTLETFAFWRGQRPFNPDSNAQFGEGGAGTFSDGKLYSQVSDP HCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH EHYGRKVFEELVASGANPEILTVHRPHIGTYKLATVVRGMRARIEELGGEIRFETRVDEL HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH LLLRDLDHSRSGKPLQVVGLKLADGSTISSRYVLFALGHSARDSFAMLERVGVKLEAKPF HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCE SVGLRIEHPQPLIDRARWGPMVGHPQLGHAEYKLVHHARNGRSVYSFCMCPGGVVVGATS EEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCC QADCVVTNGMSQHTRNERNANSALVVNLEHQDLCSYERWPGDPLAGVALQHELERRAFQL CCCEEEECCCHHHHCCCCCCCCEEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC GGGGYCAPAQRQEDFLAGRPTTCLGEVTPSYLPGIKLVDLNQMLPAPLIEALREALPAFA CCCCCCCCCCCCHHHHCCCCCCCHHCCCHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHH RRLPGYEHPDAVLTGVETRTSSPVRIPRDNSFESLNTTGLIPAGEGAGYAGGILSAGIDG HHCCCCCCCCHHEECCCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCCH IRAAEALAKQLVVVHSPA HHHHHHHHHCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]