| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022480
Identifier: 124022480
GI number: 124022480
Start: 709058
End: 710212
Strand: Direct
Name: 124022480
Synonym: P9303_07711
Alternate gene names: NA
Gene position: 709058-710212 (Clockwise)
Preceding gene: 124022478
Following gene: 124022481
Centisome position: 26.43
GC content: 54.63
Gene sequence:
>1155_bases ATGATTTTTGCCAGTCTCCTTGGCTGTCAGGCGGTTTCGGCAAGTGGGTTGCTGTCTCCATCTGTGGTGGTTCTGTTGCC AAAGGGCTCTGCTGTAGAAGGTGCCAATGAGATCTTCCTCAAGGGCTTCCAGTTGGGAGAGGAGAAGGTAAGAGGTTGCG GTCTTTCGCTTGCGTCTGTGAAGTTGCGTCTTCTCAATCTGGATGATGATCCTGCTCTGGCTTTATCAGGGAACCCGCGG TTGAAGTTGGTCGTGGCGCCTCCTGCTGCGGATCTTCGTGCTTTTTCTGCTCTGGCGTCTAAGCGCAATTTCAGTGTGGT GCTGCCTTATCAGCGGGGCGCTTCGTTACGAAGTCTTGGTGAGCTGGATGCACGTTCACGCCTGTGGTTCTTGGTGGCAC CTGTTCGCGATGATCATCAGGCCATGGCCCAGCGAGTGATGGAGCAGGGTTGGCGCCGCGTCATGGTGGTGCGAGATCCA TCTGAGCTTGGTGTTGCTGCAGCGAAATCTTTTATTGAAGCCTTTCAAATCCTTGGAGGGAGGGTGGAGAGCTACGAGCC CGAGTTGGTGCAGAGCGTGAATCCTGACGATGGCGAACGACTCAAGCGTTTGCAGCAGGACCTGGTCTGGCTAGGACCTG ACGCTCTTGTCTTGGCGTCTCGCCCATCAGGTCCTCTTGCGCAGGCTTTGAAAAAGGCTCAGATGGATGGATTGCTTGGG CGGGGACCACAACATCCAGCCTGGGTATGGCTTGCATCATCGGATTTGGCGAGTGATATCGGTCCAGAAGCCTGGGAGCA ACTCTTGTTGAAGCAATCCTCACGTGGGCCTGGGTGGCAGAAATTTTCTGAATCGTTTGAGCAGCATTGGGGGCAGGCGC CAGATTTGTTGGCCGCTGCTGGCTTTGATACTGCTCGAATAATTGCGCTGTCAACGATGTCTACTTCTTTAGCTTCTGCA GAGGGAAGCGCTGATCCTCTTGGATGGGTTGATGCAGAAAGCGAACCCCAGCCCCTTTGCAAAGCTTTGCGCTTGCGGCT CGAAGGCAAACAAGTGCGTTTGGAGGGCGCCGCTAGCAGTTTTGCTTTGCGAGCAGGACAGACACCTTCAGGAACAACAG TTTTTACACGAGTTTCTGCTTTGGGGCCTGGCTGA
Upstream 100 bases:
>100_bases CCAAGCGGCCCCTTTAAGTGGTTCGTCTTTGGCTGCAGATTCCATTGCAAGTGGGTCTTGGAGGCAAAGGTTCTTTAAGG CTCCCTGGCGGAGCTGGTTG
Downstream 100 bases:
>100_bases GGCAAGACTCGAATCTGCTGCGATTGAATCAGGATTGGATGGAGCTGATGCGCTTTACGTGTGAGGTGATGACGTGTTGC GGTTGAGTGAGTTGAAGCTT
Product: histidine kinase-, DNA gyrase B-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIFASLLGCQAVSASGLLSPSVVVLLPKGSAVEGANEIFLKGFQLGEEKVRGCGLSLASVKLRLLNLDDDPALALSGNPR LKLVVAPPAADLRAFSALASKRNFSVVLPYQRGASLRSLGELDARSRLWFLVAPVRDDHQAMAQRVMEQGWRRVMVVRDP SELGVAAAKSFIEAFQILGGRVESYEPELVQSVNPDDGERLKRLQQDLVWLGPDALVLASRPSGPLAQALKKAQMDGLLG RGPQHPAWVWLASSDLASDIGPEAWEQLLLKQSSRGPGWQKFSESFEQHWGQAPDLLAAAGFDTARIIALSTMSTSLASA EGSADPLGWVDAESEPQPLCKALRLRLEGKQVRLEGAASSFALRAGQTPSGTTVFTRVSALGPG
Sequences:
>Translated_384_residues MIFASLLGCQAVSASGLLSPSVVVLLPKGSAVEGANEIFLKGFQLGEEKVRGCGLSLASVKLRLLNLDDDPALALSGNPR LKLVVAPPAADLRAFSALASKRNFSVVLPYQRGASLRSLGELDARSRLWFLVAPVRDDHQAMAQRVMEQGWRRVMVVRDP SELGVAAAKSFIEAFQILGGRVESYEPELVQSVNPDDGERLKRLQQDLVWLGPDALVLASRPSGPLAQALKKAQMDGLLG RGPQHPAWVWLASSDLASDIGPEAWEQLLLKQSSRGPGWQKFSESFEQHWGQAPDLLAAAGFDTARIIALSTMSTSLASA EGSADPLGWVDAESEPQPLCKALRLRLEGKQVRLEGAASSFALRAGQTPSGTTVFTRVSALGPG >Mature_384_residues MIFASLLGCQAVSASGLLSPSVVVLLPKGSAVEGANEIFLKGFQLGEEKVRGCGLSLASVKLRLLNLDDDPALALSGNPR LKLVVAPPAADLRAFSALASKRNFSVVLPYQRGASLRSLGELDARSRLWFLVAPVRDDHQAMAQRVMEQGWRRVMVVRDP SELGVAAAKSFIEAFQILGGRVESYEPELVQSVNPDDGERLKRLQQDLVWLGPDALVLASRPSGPLAQALKKAQMDGLLG RGPQHPAWVWLASSDLASDIGPEAWEQLLLKQSSRGPGWQKFSESFEQHWGQAPDLLAAAGFDTARIIALSTMSTSLASA EGSADPLGWVDAESEPQPLCKALRLRLEGKQVRLEGAASSFALRAGQTPSGTTVFTRVSALGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41060; Mature: 41060
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFASLLGCQAVSASGLLSPSVVVLLPKGSAVEGANEIFLKGFQLGEEKVRGCGLSLASV CCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHCCCEEHEE KLRLLNLDDDPALALSGNPRLKLVVAPPAADLRAFSALASKRNFSVVLPYQRGASLRSLG EEEEEECCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH ELDARSRLWFLVAPVRDDHQAMAQRVMEQGWRRVMVVRDPSELGVAAAKSFIEAFQILGG HCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC RVESYEPELVQSVNPDDGERLKRLQQDLVWLGPDALVLASRPSGPLAQALKKAQMDGLLG CCCCCCCHHHHCCCCCHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHHHHHC RGPQHPAWVWLASSDLASDIGPEAWEQLLLKQSSRGPGWQKFSESFEQHWGQAPDLLAAA CCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHC GFDTARIIALSTMSTSLASAEGSADPLGWVDAESEPQPLCKALRLRLEGKQVRLEGAASS CCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCH FALRAGQTPSGTTVFTRVSALGPG HEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MIFASLLGCQAVSASGLLSPSVVVLLPKGSAVEGANEIFLKGFQLGEEKVRGCGLSLASV CCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHCCCEEHEE KLRLLNLDDDPALALSGNPRLKLVVAPPAADLRAFSALASKRNFSVVLPYQRGASLRSLG EEEEEECCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH ELDARSRLWFLVAPVRDDHQAMAQRVMEQGWRRVMVVRDPSELGVAAAKSFIEAFQILGG HCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC RVESYEPELVQSVNPDDGERLKRLQQDLVWLGPDALVLASRPSGPLAQALKKAQMDGLLG CCCCCCCHHHHCCCCCHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHHHHHC RGPQHPAWVWLASSDLASDIGPEAWEQLLLKQSSRGPGWQKFSESFEQHWGQAPDLLAAA CCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHC GFDTARIIALSTMSTSLASAEGSADPLGWVDAESEPQPLCKALRLRLEGKQVRLEGAASS CCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCH FALRAGQTPSGTTVFTRVSALGPG HEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA