| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022364
Identifier: 124022364
GI number: 124022364
Start: 616002
End: 617060
Strand: Reverse
Name: 124022364
Synonym: P9303_06541
Alternate gene names: NA
Gene position: 617060-616002 (Counterclockwise)
Preceding gene: 124022367
Following gene: 124022363
Centisome position: 23.0
GC content: 55.05
Gene sequence:
>1059_bases ATGCCAACCCAAGTGATCGAATCGGCTCCCATCACCGCATCAATCGTCCAAGCAAGAACAGGGCGTCCTGCCAGAGGCAA AAGCAATTTGTTGCGATCCGCTCCCATACGGCTTCCGCTTCCTGCAGCGACAATCAACAGATGCATATGCGCCTCCTGCC GCAAGCAGGCTGAAACCTCCTCCATACAATCAGCTCGCAACGCCTCTGCCTCTGGATCGATGCGTGTTCTCGCCCTCAGT CCGGGTCCTTTAATCCAACAGCTTCAGAGGCTTCCAGCCCTAGCCGCCGCAGCCAACCAGCTGCAAGGCAAACTGCAGCT GGCCTGCGATCCCACCCATCAAGCTTTGTGGAGTCTGTTGCCAGCGATAGAAAAGGTAATCCCAATCGCCTTTGACTCCA GCCCATCCCTCGCCGACTGGACCAATCTGCTCGGATCTGTAAGAGAAGGCGATTTTCAAGTTTGCTTCAACTTCGCCCAA GGGCAACAAGTGAATTTGATGCTCTCCATGAGCCACATCCCCATCAGGGTTGCGGAACAAGGCTTTGCACGCACAGCCCT CGTTAAGCCCAGCAAAGGTTGGCCTGCACAACAATTGGACTGCTACCTCCAAGCGATTGGCCTCACTCTTGACGCCGACA GCTTCCGGCTGTTCCTGCCAGACGACAGCCTTCAGAAGGTTCGTGATCAACACCCCACTGGAGAGGGCCCCCTCCTACTG CTGGCTCCAAATGGCAACGATGGAGACTGGCCAACTCAGCAATGGTTAGCCCTTCCAAATGCAATCAAAGGCAAATTACC CAATCTCAGAAGCATCACGCTGCCTTTAAAAGCACCCCTAATCCATCGCGCTGCCGAAGTGGCCTGCGCTGATGTCGTAC TCAGCAGCTGTCCAATCACCCAACTGCTTGCCGTTTATACAGGCGTTCCTTTGGTTGCCCTAGGCACTCCAGCCGACGCC TTACCGAAACGAGATGAAATCCGTTGCCTGGGTGCCAGTCATGCAGACATCAACTCAATCAACCAGCAGGAGGTTCTCAA CGCACTGGGCTTCCAATGA
Upstream 100 bases:
>100_bases GGATTCCTGCCTTGTGCTGCCCCCCTCAATCCAAACAACGGGTTTGGCTGCCTCAGCCAACAACTCCATGATCATTGCTC GGTCAACAGGTTGGCCAACA
Downstream 100 bases:
>100_bases AAAGTTGGTGGTACCCATTCAGACGAGGTCCGCTTGCAAGCCTGCCGTTGCAAGTGCTCGCCAAACCCTGGCTAGGGCCA ATCCTGGCCCTGGCCGTGGT
Product: ADP-heptose:LPS heptosyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPTQVIESAPITASIVQARTGRPARGKSNLLRSAPIRLPLPAATINRCICASCRKQAETSSIQSARNASASGSMRVLALS PGPLIQQLQRLPALAAAANQLQGKLQLACDPTHQALWSLLPAIEKVIPIAFDSSPSLADWTNLLGSVREGDFQVCFNFAQ GQQVNLMLSMSHIPIRVAEQGFARTALVKPSKGWPAQQLDCYLQAIGLTLDADSFRLFLPDDSLQKVRDQHPTGEGPLLL LAPNGNDGDWPTQQWLALPNAIKGKLPNLRSITLPLKAPLIHRAAEVACADVVLSSCPITQLLAVYTGVPLVALGTPADA LPKRDEIRCLGASHADINSINQQEVLNALGFQ
Sequences:
>Translated_352_residues MPTQVIESAPITASIVQARTGRPARGKSNLLRSAPIRLPLPAATINRCICASCRKQAETSSIQSARNASASGSMRVLALS PGPLIQQLQRLPALAAAANQLQGKLQLACDPTHQALWSLLPAIEKVIPIAFDSSPSLADWTNLLGSVREGDFQVCFNFAQ GQQVNLMLSMSHIPIRVAEQGFARTALVKPSKGWPAQQLDCYLQAIGLTLDADSFRLFLPDDSLQKVRDQHPTGEGPLLL LAPNGNDGDWPTQQWLALPNAIKGKLPNLRSITLPLKAPLIHRAAEVACADVVLSSCPITQLLAVYTGVPLVALGTPADA LPKRDEIRCLGASHADINSINQQEVLNALGFQ >Mature_351_residues PTQVIESAPITASIVQARTGRPARGKSNLLRSAPIRLPLPAATINRCICASCRKQAETSSIQSARNASASGSMRVLALSP GPLIQQLQRLPALAAAANQLQGKLQLACDPTHQALWSLLPAIEKVIPIAFDSSPSLADWTNLLGSVREGDFQVCFNFAQG QQVNLMLSMSHIPIRVAEQGFARTALVKPSKGWPAQQLDCYLQAIGLTLDADSFRLFLPDDSLQKVRDQHPTGEGPLLLL APNGNDGDWPTQQWLALPNAIKGKLPNLRSITLPLKAPLIHRAAEVACADVVLSSCPITQLLAVYTGVPLVALGTPADAL PKRDEIRCLGASHADINSINQQEVLNALGFQ
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37660; Mature: 37529
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQVIESAPITASIVQARTGRPARGKSNLLRSAPIRLPLPAATINRCICASCRKQAETS CCCCHHCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SIQSARNASASGSMRVLALSPGPLIQQLQRLPALAAAANQLQGKLQLACDPTHQALWSLL HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHH PAIEKVIPIAFDSSPSLADWTNLLGSVREGDFQVCFNFAQGQQVNLMLSMSHIPIRVAEQ HHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEECCC GFARTALVKPSKGWPAQQLDCYLQAIGLTLDADSFRLFLPDDSLQKVRDQHPTGEGPLLL CCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHCCCCCCCCEEE LAPNGNDGDWPTQQWLALPNAIKGKLPNLRSITLPLKAPLIHRAAEVACADVVLSSCPIT EECCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH QLLAVYTGVPLVALGTPADALPKRDEIRCLGASHADINSINQQEVLNALGFQ HHHHHHCCCCEEEECCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure PTQVIESAPITASIVQARTGRPARGKSNLLRSAPIRLPLPAATINRCICASCRKQAETS CCCHHCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH SIQSARNASASGSMRVLALSPGPLIQQLQRLPALAAAANQLQGKLQLACDPTHQALWSLL HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHH PAIEKVIPIAFDSSPSLADWTNLLGSVREGDFQVCFNFAQGQQVNLMLSMSHIPIRVAEQ HHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEECCC GFARTALVKPSKGWPAQQLDCYLQAIGLTLDADSFRLFLPDDSLQKVRDQHPTGEGPLLL CCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHCCCCCCCCEEE LAPNGNDGDWPTQQWLALPNAIKGKLPNLRSITLPLKAPLIHRAAEVACADVVLSSCPIT EECCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH QLLAVYTGVPLVALGTPADALPKRDEIRCLGASHADINSINQQEVLNALGFQ HHHHHHCCCCEEEECCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA