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The map label for this gene is ldcA [C]

Identifier: 124022367

GI number: 124022367

Start: 618247

End: 619146

Strand: Reverse

Name: ldcA [C]

Synonym: P9303_06571

Alternate gene names: 124022367

Gene position: 619146-618247 (Counterclockwise)

Preceding gene: 124022368

Following gene: 124022364

Centisome position: 23.08

GC content: 57.89

Gene sequence:

>900_bases
ATGGTGCAGCTCCGATCTGACCTGCTCACACCAGCGCTTCAACGTGGCGACGAGGTGATCACAGTGGCTGCGAGTTCAGC
GCTGGAGGATGAACAATCACTGCTCGAAGGCCTCAAAGTCCTTGAAGAATGGGGATTAGTCTGCCGGTCTCAGCAAGTGA
GTGAACGCCGCTGGGGGTACCTGGCGGGCAATGATGCCAGCCGCCAGCGCGATCTAAATCCTGAGTCCCCTGCTGCTCTG
CTGGCTTGTGCTCGCGGCGGCTGGGGAGCTGCACGTTTACTGGAACACAAGCAAACCTGGCAACCAGGTTGGCTCATGGG
GTTTTCAGATGTCACCGCCCTGCTCTGGGCACGTTTGGCGGCCGGGTTCGACGGCTGCGTGCATGGCCCCTTACTCACCA
CACTTGCCAAGGAACCAGCCTGGAGCCAAGCCCGGCTGCATGATCTTCTCTTCGGCAAACAGATCCCAGACCTTGAAGGG
CAGCCCTGGATGGGTGGAGTGGCAAGCGGGCCATTGGTGGTCGCCAATCTCACTGTGGCCTCCCATTTGCTAGGGAGTAG
CCATGTACCCGATCTCAACGGTGCAATCTTGATTCTGGAAGATGTTGAAGAAGCGCCCTATCGCATCGACCGCATGCTGA
CCCACTGGCGCCTCGCAGGCCTACTACAAAGACTGGCCGGCCTCGGATTCGGCAGCTTTAAGAGGTGTGAAGCACCTGAA
CAGATTCCTGGGGATCAAACCTTCCAACTTGAGGAAGTCCTCAAAGAACGCAGTACTGACCTCGGAATTCCTGTCGTCGG
CAAACTCCCAGTTGGTCATTGCTGCGGCAATGCTGCCTTACCACTTGGACGACAAGCCCAGCTTGACGGCAGCCATGGTC
GACTAATACTTCTGCGCTGA

Upstream 100 bases:

>100_bases
CAATCAACCAATGACGACCTACGGGCAGCACTTTCAGCATCAAGTTCTGCTAGGCGCGATGTTGCTGCTCGGCTTGATCC
TGGGGCGCATCAGCTGAATC

Downstream 100 bases:

>100_bases
TTCTAAGTATTTCGATGCTCAATTTCAAAATATAGACGACTTCTCTGAAACTCAAACCCGCGGGACAGCCATTAAGTTCT
GCCCCTCTCGAAGGATTTTG

Product: carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVQLRSDLLTPALQRGDEVITVAASSALEDEQSLLEGLKVLEEWGLVCRSQQVSERRWGYLAGNDASRQRDLNPESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSQARLHDLLFGKQIPDLEG
QPWMGGVASGPLVVANLTVASHLLGSSHVPDLNGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKRCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGKLPVGHCCGNAALPLGRQAQLDGSHGRLILLR

Sequences:

>Translated_299_residues
MVQLRSDLLTPALQRGDEVITVAASSALEDEQSLLEGLKVLEEWGLVCRSQQVSERRWGYLAGNDASRQRDLNPESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSQARLHDLLFGKQIPDLEG
QPWMGGVASGPLVVANLTVASHLLGSSHVPDLNGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKRCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGKLPVGHCCGNAALPLGRQAQLDGSHGRLILLR
>Mature_299_residues
MVQLRSDLLTPALQRGDEVITVAASSALEDEQSLLEGLKVLEEWGLVCRSQQVSERRWGYLAGNDASRQRDLNPESPAAL
LACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLAAGFDGCVHGPLLTTLAKEPAWSQARLHDLLFGKQIPDLEG
QPWMGGVASGPLVVANLTVASHLLGSSHVPDLNGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKRCEAPE
QIPGDQTFQLEEVLKERSTDLGIPVVGKLPVGHCCGNAALPLGRQAQLDGSHGRLILLR

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=286, Percent_Identity=28.6713286713287, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 32445; Mature: 32445

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLRSDLLTPALQRGDEVITVAASSALEDEQSLLEGLKVLEEWGLVCRSQQVSERRWGY
CCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LAGNDASRQRDLNPESPAALLACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLA
ECCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHH
AGFDGCVHGPLLTTLAKEPAWSQARLHDLLFGKQIPDLEGQPWMGGVASGPLVVANLTVA
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
SHLLGSSHVPDLNGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKRCEAPE
HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QIPGDQTFQLEEVLKERSTDLGIPVVGKLPVGHCCGNAALPLGRQAQLDGSHGRLILLR
CCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MVQLRSDLLTPALQRGDEVITVAASSALEDEQSLLEGLKVLEEWGLVCRSQQVSERRWGY
CCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LAGNDASRQRDLNPESPAALLACARGGWGAARLLEHKQTWQPGWLMGFSDVTALLWARLA
ECCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHH
AGFDGCVHGPLLTTLAKEPAWSQARLHDLLFGKQIPDLEGQPWMGGVASGPLVVANLTVA
HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
SHLLGSSHVPDLNGAILILEDVEEAPYRIDRMLTHWRLAGLLQRLAGLGFGSFKRCEAPE
HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QIPGDQTFQLEEVLKERSTDLGIPVVGKLPVGHCCGNAALPLGRQAQLDGSHGRLILLR
CCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]