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The map label for this gene is 124022232

Identifier: 124022232

GI number: 124022232

Start: 510440

End: 511327

Strand: Reverse

Name: 124022232

Synonym: P9303_05221

Alternate gene names: NA

Gene position: 511327-510440 (Counterclockwise)

Preceding gene: 124022233

Following gene: 124022231

Centisome position: 19.06

GC content: 58.45

Gene sequence:

>888_bases
ATGGCTGCTGCTGCTGGAGACACCGATGGGCATCGATTTGCCCTGGAAAGTGCTACGAGAAGCAAATCCCCTCGCCTTAA
CGAGCCTCAGCGAACTGTGATCTTGCCGCGGCAAGAGCTGCTCAAAGGTTGCCTGGATCCACAAGGCATGGAAGCCCTGC
TGGTCCAGGCAGACTCAGTGCTACGGACCTGGCAGCCCAGCTGGAGTGCGTTTGTTTCTGCTCCCTTACGGGAGCAAGCC
CTGCATCGGTTTGCCACCCTCACTGATCTGCACTGGCACGCCGACGGTGGTCACCCTGGCGCTGAACGCCAGCGGCTGTG
CTGCAGCCGCTGCGAGGATCACCATCACCCCACTCCCTCACAAGCAGCCCCGATTCATGGTCTGCTGCTGCATGGCAACT
TTTTATTTGATTCCCCCAGCCCAACAGATCTCCGCCAAGCCCTAGAGGCAATCGACACTCGACCAGAACAACTTGGAGAT
CTTTGGATTCGCGGTGATCGCGGTGCACAAGCCCTTTGCACTCCTGAGTTAGCCGTCAATCTCGATGGCCGCAGCAGCAA
AGTACGAGAGGTAGAGATCACCTGTGAAGCCGTGGCAGTGACTCAACTGCAGCCACCAGCCCACCGCCTGACCCGCCGAT
TGAACAGTGTTGAGGCCTCTTGCAGGATCGATGCAATCGCCTCGGCCGGCTTTGGTCTATCGCGAGCCAAGGTGGTCAAT
CAAATCAAACAAGGTCACCTGCGCCTGAACTGGGAACCAGTCCGACAAACAAGTCGAGAACTTGTAGTGGGCGATCGCCT
GCAACTTCAGGGTCGAGGCACGCTCAAGGTGCTGGCACTGGAAATGACCAAGCGTCAGCGCTGGCGGGTGGAAATGCTGC
GGCACTGA

Upstream 100 bases:

>100_bases
TCGTCTCAGGTTGGATGGGTAGTTATGCAGCCGCAATCAGCGTCAAAATTCCAAACGCTGAAGACGTTCGCATCCTGCGC
AATCGCCATGACCAAGGCCA

Downstream 100 bases:

>100_bases
AGATTCGTATCGCCAGGCTGCTAGCTTCTCTGCTTGAAAAGCCACCGGTCACCACTCACTCTGATCGAAGGGCCCCGCGG
GCGATTAGCTCAGAGGTAGA

Product: S4-like domain-containing protein

Products: NA

Alternate protein names: S4 Domain-Containing Protein; S4-Like Domain-Containing Protein; Photosystem II S4 Domain-Containing Protein; S4 Domain Protein

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAAAAGDTDGHRFALESATRSKSPRLNEPQRTVILPRQELLKGCLDPQGMEALLVQADSVLRTWQPSWSAFVSAPLREQA
LHRFATLTDLHWHADGGHPGAERQRLCCSRCEDHHHPTPSQAAPIHGLLLHGNFLFDSPSPTDLRQALEAIDTRPEQLGD
LWIRGDRGAQALCTPELAVNLDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVN
QIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLRH

Sequences:

>Translated_295_residues
MAAAAGDTDGHRFALESATRSKSPRLNEPQRTVILPRQELLKGCLDPQGMEALLVQADSVLRTWQPSWSAFVSAPLREQA
LHRFATLTDLHWHADGGHPGAERQRLCCSRCEDHHHPTPSQAAPIHGLLLHGNFLFDSPSPTDLRQALEAIDTRPEQLGD
LWIRGDRGAQALCTPELAVNLDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVN
QIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLRH
>Mature_294_residues
AAAAGDTDGHRFALESATRSKSPRLNEPQRTVILPRQELLKGCLDPQGMEALLVQADSVLRTWQPSWSAFVSAPLREQAL
HRFATLTDLHWHADGGHPGAERQRLCCSRCEDHHHPTPSQAAPIHGLLLHGNFLFDSPSPTDLRQALEAIDTRPEQLGDL
WIRGDRGAQALCTPELAVNLDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVNQ
IKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLRH

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32900; Mature: 32769

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAAGDTDGHRFALESATRSKSPRLNEPQRTVILPRQELLKGCLDPQGMEALLVQADSV
CCCCCCCCCCCEEEECHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHH
LRTWQPSWSAFVSAPLREQALHRFATLTDLHWHADGGHPGAERQRLCCSRCEDHHHPTPS
HHHCCCCHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
QAAPIHGLLLHGNFLFDSPSPTDLRQALEAIDTRPEQLGDLWIRGDRGAQALCTPELAVN
CCCCCEEEEEECCEEECCCCCHHHHHHHHHHCCCHHHHCCEEEECCCCCCEEECCCEEEE
LDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVN
ECCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLRH
HHHHCCEEECCHHHHHCCHHEEECCEEEECCCCCEEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAAAGDTDGHRFALESATRSKSPRLNEPQRTVILPRQELLKGCLDPQGMEALLVQADSV
CCCCCCCCCCEEEECHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHH
LRTWQPSWSAFVSAPLREQALHRFATLTDLHWHADGGHPGAERQRLCCSRCEDHHHPTPS
HHHCCCCHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
QAAPIHGLLLHGNFLFDSPSPTDLRQALEAIDTRPEQLGDLWIRGDRGAQALCTPELAVN
CCCCCEEEEEECCEEECCCCCHHHHHHHHHHCCCHHHHCCEEEECCCCCCEEECCCEEEE
LDGRSSKVREVEITCEAVAVTQLQPPAHRLTRRLNSVEASCRIDAIASAGFGLSRAKVVN
ECCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QIKQGHLRLNWEPVRQTSRELVVGDRLQLQGRGTLKVLALEMTKRQRWRVEMLRH
HHHHCCEEECCHHHHHCCHHEEECCEEEECCCCCEEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA