| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is dnaK [H]
Identifier: 124022220
GI number: 124022220
Start: 501969
End: 503594
Strand: Reverse
Name: dnaK [H]
Synonym: P9303_05101
Alternate gene names: 124022220
Gene position: 503594-501969 (Counterclockwise)
Preceding gene: 124022223
Following gene: 124022218
Centisome position: 18.77
GC content: 59.04
Gene sequence:
>1626_bases ATGGCCATGGACATGCCCCCTGAGGGCGAAGAAAAGCTTCAGGTTTTCCAACAAGTTGGCACCCTTGCCATTGACCTTGG GAACACCACCACGGTTGTGGCCTTCCAAGCTGAACGTGCTGCCAGCCCTCAACTCCTCGATCTCCCACCAATCAGCCGTC GCCCGGGAGAAGTCCCCAGTTTGATCTGGGCCGGCCAAAGCAATGACCCCAACCCTCTAGTGGGGCAGCAAGTGGACGAA GCAGGCCTAGTGGGGCAGGGTCACCCAAGCTTGAGCAGAGACTTCAAGCGCTGGATCGGTGCACCTCATCCAACCAAAAG CGATGGCTCTTGCCTCTCGCCAGAACAGGCCGGAGAAATCTTGCTGCAGCAGATCTGGCGCCGACTCCCTCCCCATATCG AGGTGCGACGTCTTGTGCTCACTGCGCCAGTGGAGAGCTATCGCGCCTACAGAACCTGGCTAAATCAGGTCTGCACAACA CTGCCGGTCGAAGAGATCGCTCTGGTTGATGAACCCACCGCCGCTGCCATGGGTGCCGGCCTACCCCCAGGCTCCAAGCT GTTGGTGATGGACATCGGTGGCAGCACCATTGATCTCTCCCTCGTGGCCCTCGAAGGTGGTGAAGGACGGGCGGCTCCAA TCGCTCAATTACTTCGATTTGCTGGCCAAGATCTCCAGGACAGCAGCAAACAAGCCCTGCGCTGCGCACGCGTGCTTGGC AAGGCTGGACTGAAGCTGGGTGGACGGGACCTGGATCATTGGATTGCTAATCATCTTTATCCCGACGTTCCGCTCTCAGA AACACTCCTCAATGCTGCAGAGAGGCTCAAATGCCGCCTTAGCCAGGTGGATCTTCGCGCTGAGGCCACCCAGCTGGAGA TTGCCGCCGATTCAGAAGGCAATGAAGTCCTGCCTCTACGTCTCTGCCGCAGGGAGCTGGAAGAACTGCTCATCGCCAGA GGCTTTCTCAACAGCCTGGCCAGCCTGCTCAATGAAACCCTGGCAAGGGGGCGTGGCAATGGTTGCGAACTCAAAGACCT ACAGGGGGTCGTAGCCGTGGGCGGCGGCGCACAAATCCCCCTCGTTCGCAGTTGGTTGCAGCAGCAAACGCAACCAGCCC CGCTCCTCACGCCTCCACCCATAGAGGCCGTTGCTGTTGGAGCCCTGCAACTCACACCGGGGGTCAAAGTTCAGGATGTA CTGCACCGCGGAGTATCTCTGCGCTGCTGGGATCAGCGCGGTGGACAACATCATTGGCATCCGCTTTTTCTGGCTGGTCA ACCCTGGCCAACAACCGCCCCCCTTGAGCTTGTACTGGCCGCCAGCCGGATCGATCAACTGGAGCTGGAGGTGGTGCTTG CTGAGCCAGACATCAACGAGAGCCATGAGGTCATCTACATCGATGGCATGCCAACCCTGCAATCAAAGCCAGCAGAGCGC AAACTGCATCCATGGCCAGGAACCTGCCCTACAGCTTCGCTTGCACTACAACCACCCGGTCAGCCGGGGCAAGACTGCCT GAGGTTGCAATTCTCCATCGACGACGATGCCCAGCTGCAGATGGAGGGGCTAGATCTACGCAGTGGTGAGCGGCTAGACA AGCAAAAGCTAGGCACCGTGCAGTAA
Upstream 100 bases:
>100_bases AGCCTCAATGCAAGGGTCCTCTCGATAAAAAGAGAGCACCAGGCGCTGCAACCGATCCATCGTCATTGTCTCTTAACCTT GTGATGACTACAACCTGGCC
Downstream 100 bases:
>100_bases CTGATTGATCCACACCAACCTCAACACAATCCAAAGGCAAGACGACCATGGGCTGAACTGACTTCTGTCATCAAGACGAA CAGCGCCGATGCATGAACAC
Product: HSP70 family molecular chaperone
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MAMDMPPEGEEKLQVFQQVGTLAIDLGNTTTVVAFQAERAASPQLLDLPPISRRPGEVPSLIWAGQSNDPNPLVGQQVDE AGLVGQGHPSLSRDFKRWIGAPHPTKSDGSCLSPEQAGEILLQQIWRRLPPHIEVRRLVLTAPVESYRAYRTWLNQVCTT LPVEEIALVDEPTAAAMGAGLPPGSKLLVMDIGGSTIDLSLVALEGGEGRAAPIAQLLRFAGQDLQDSSKQALRCARVLG KAGLKLGGRDLDHWIANHLYPDVPLSETLLNAAERLKCRLSQVDLRAEATQLEIAADSEGNEVLPLRLCRRELEELLIAR GFLNSLASLLNETLARGRGNGCELKDLQGVVAVGGGAQIPLVRSWLQQQTQPAPLLTPPPIEAVAVGALQLTPGVKVQDV LHRGVSLRCWDQRGGQHHWHPLFLAGQPWPTTAPLELVLAASRIDQLELEVVLAEPDINESHEVIYIDGMPTLQSKPAER KLHPWPGTCPTASLALQPPGQPGQDCLRLQFSIDDDAQLQMEGLDLRSGERLDKQKLGTVQ
Sequences:
>Translated_541_residues MAMDMPPEGEEKLQVFQQVGTLAIDLGNTTTVVAFQAERAASPQLLDLPPISRRPGEVPSLIWAGQSNDPNPLVGQQVDE AGLVGQGHPSLSRDFKRWIGAPHPTKSDGSCLSPEQAGEILLQQIWRRLPPHIEVRRLVLTAPVESYRAYRTWLNQVCTT LPVEEIALVDEPTAAAMGAGLPPGSKLLVMDIGGSTIDLSLVALEGGEGRAAPIAQLLRFAGQDLQDSSKQALRCARVLG KAGLKLGGRDLDHWIANHLYPDVPLSETLLNAAERLKCRLSQVDLRAEATQLEIAADSEGNEVLPLRLCRRELEELLIAR GFLNSLASLLNETLARGRGNGCELKDLQGVVAVGGGAQIPLVRSWLQQQTQPAPLLTPPPIEAVAVGALQLTPGVKVQDV LHRGVSLRCWDQRGGQHHWHPLFLAGQPWPTTAPLELVLAASRIDQLELEVVLAEPDINESHEVIYIDGMPTLQSKPAER KLHPWPGTCPTASLALQPPGQPGQDCLRLQFSIDDDAQLQMEGLDLRSGERLDKQKLGTVQ >Mature_540_residues AMDMPPEGEEKLQVFQQVGTLAIDLGNTTTVVAFQAERAASPQLLDLPPISRRPGEVPSLIWAGQSNDPNPLVGQQVDEA GLVGQGHPSLSRDFKRWIGAPHPTKSDGSCLSPEQAGEILLQQIWRRLPPHIEVRRLVLTAPVESYRAYRTWLNQVCTTL PVEEIALVDEPTAAAMGAGLPPGSKLLVMDIGGSTIDLSLVALEGGEGRAAPIAQLLRFAGQDLQDSSKQALRCARVLGK AGLKLGGRDLDHWIANHLYPDVPLSETLLNAAERLKCRLSQVDLRAEATQLEIAADSEGNEVLPLRLCRRELEELLIARG FLNSLASLLNETLARGRGNGCELKDLQGVVAVGGGAQIPLVRSWLQQQTQPAPLLTPPPIEAVAVGALQLTPGVKVQDVL HRGVSLRCWDQRGGQHHWHPLFLAGQPWPTTAPLELVLAASRIDQLELEVVLAEPDINESHEVIYIDGMPTLQSKPAERK LHPWPGTCPTASLALQPPGQPGQDCLRLQFSIDDDAQLQMEGLDLRSGERLDKQKLGTVQ
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322426, Length=294, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 58674; Mature: 58543
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDMPPEGEEKLQVFQQVGTLAIDLGNTTTVVAFQAERAASPQLLDLPPISRRPGEVPS CCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCC LIWAGQSNDPNPLVGQQVDEAGLVGQGHPSLSRDFKRWIGAPHPTKSDGSCLSPEQAGEI EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LLQQIWRRLPPHIEVRRLVLTAPVESYRAYRTWLNQVCTTLPVEEIALVDEPTAAAMGAG HHHHHHHHCCCCCEEEHEEEECCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHCCC LPPGSKLLVMDIGGSTIDLSLVALEGGEGRAAPIAQLLRFAGQDLQDSSKQALRCARVLG CCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KAGLKLGGRDLDHWIANHLYPDVPLSETLLNAAERLKCRLSQVDLRAEATQLEIAADSEG HHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC NEVLPLRLCRRELEELLIARGFLNSLASLLNETLARGRGNGCELKDLQGVVAVGGGAQIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCH LVRSWLQQQTQPAPLLTPPPIEAVAVGALQLTPGVKVQDVLHRGVSLRCWDQRGGQHHWH HHHHHHHHCCCCCCCCCCCCHHHHEECEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCC PLFLAGQPWPTTAPLELVLAASRIDQLELEVVLAEPDINESHEVIYIDGMPTLQSKPAER EEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCC KLHPWPGTCPTASLALQPPGQPGQDCLRLQFSIDDDAQLQMEGLDLRSGERLDKQKLGTV CCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCC Q C >Mature Secondary Structure AMDMPPEGEEKLQVFQQVGTLAIDLGNTTTVVAFQAERAASPQLLDLPPISRRPGEVPS CCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCC LIWAGQSNDPNPLVGQQVDEAGLVGQGHPSLSRDFKRWIGAPHPTKSDGSCLSPEQAGEI EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LLQQIWRRLPPHIEVRRLVLTAPVESYRAYRTWLNQVCTTLPVEEIALVDEPTAAAMGAG HHHHHHHHCCCCCEEEHEEEECCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHCCC LPPGSKLLVMDIGGSTIDLSLVALEGGEGRAAPIAQLLRFAGQDLQDSSKQALRCARVLG CCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KAGLKLGGRDLDHWIANHLYPDVPLSETLLNAAERLKCRLSQVDLRAEATQLEIAADSEG HHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC NEVLPLRLCRRELEELLIARGFLNSLASLLNETLARGRGNGCELKDLQGVVAVGGGAQIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCH LVRSWLQQQTQPAPLLTPPPIEAVAVGALQLTPGVKVQDVLHRGVSLRCWDQRGGQHHWH HHHHHHHHCCCCCCCCCCCCHHHHEECEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCC PLFLAGQPWPTTAPLELVLAASRIDQLELEVVLAEPDINESHEVIYIDGMPTLQSKPAER EEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCC KLHPWPGTCPTASLALQPPGQPGQDCLRLQFSIDDDAQLQMEGLDLRSGERLDKQKLGTV CCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA