| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is gpmI
Identifier: 124022218
GI number: 124022218
Start: 499501
End: 501123
Strand: Reverse
Name: gpmI
Synonym: P9303_05081
Alternate gene names: 124022218
Gene position: 501123-499501 (Counterclockwise)
Preceding gene: 124022220
Following gene: 124022217
Centisome position: 18.68
GC content: 56.99
Gene sequence:
>1623_bases ATGTCCAGCAGCAGTTCCGGAAATTCAAGGCATTTCGGCCGGGTTGCACCTGTAGTGCTGGCGATCCTTGATGGCTGGGG ACATCGTGAGGAACTTGAGCACAACTCCATCCGTAGTGCTGAGACTCCAATCATGGATGCCCTATGGCATGCCTACCCCC ACACCCTGATCGAAGCCAGTGGTGCCGCTGTCGGGCTGCCAGACAACCAGATGGGCAACTCTGAGGTCGGTCATCTCACC ATCGGTGCTGGCCGGGTGATCCGTCAGGAACTCGTTCGCATTAGTGAAACCGTACAAACCGGAAGGCTGGGGCAAACTCC TGCCCTGATTGCCTTAGCCGAACGGTTGCGCAAGTCTGACGGCACACTTCACCTGTTGGGACTCTGCTCCGATGGCGGTG TCCATAGCCATATCAACCATCTCTGCGGTCTTTTGCACTGGGCTGCCGCCGCTGGGCTCAACAAAGTGGCATTGCATCTC ATCACCGATGGACGAGACACCCCGACTCAAAGCGCGAGCAACTACCTACACCAAATCGAAGACGCCATCAACGCCAGTGG AGTAGGTGAGTTGGCCAGCCTCTGCGGCCGCTATTGGGCCATGGACCGTGACCACCGCTGGGAGCGCACGATTAGGGCCT ATGAGGTACTCACCGACCCAAATCAATCGATCAGCAGAGTCACTGCCGAAGACGTTCTCAGCGCAAGTTATGCCAACGGC ACCACCGACGAATTCCTAGAACCCACACGTCTTAGCAATAACTACTTCAAAGACGGGGATGGCCTCGTGATGTTCAACTT CCGTCCTGACCGCGCCAGGCAATTGGTGCAATCCCTCACTCTTCCAGACTTCGATGGTTTCCCTCGAGCCAATCAGCCCA GCCTCGATGTCGTTACCTTCACCCAGTACGAACACGATCTCCCTGTAGCAGTTGCCTTCCCAGCCGAATCACTCGACGAT CTGCTCGGTCAGGTGGTCTCTGAACACGGCCTACGCCAATACCGCACTGCCGAAACAGAGAAGTATCCCCACGTCACATA TTTCATGAATGGTGGCATCGAACAGCCACTAGCAGGCGAGGAGCGTCATCTTGTGCCATCCCCCCGCGTGGCCACCTACG ACCTGGCTCCAGCGATGTCCGCAGACACGCTGACCGAGAGTTGTGTGAAAGCGATTGAGAGTGGCGTGTATTCACTGGTC ATCATCAACTACGCCAATCCAGATATGGTCGGGCACACCGGTGTGATGGGAGCCGCTCAGGAAGCCATCAGCACCGTGGA CCGCTGCATCGGCCGATTGCTGGATTCGACCGGACGAATGGGCGGCACTCTGTTGATCACGGCAGACCATGGCAATGCCG AACTGATGCAAGGTTCAGATGGTCAGGCTTGGACGGCTCACACCACGAACCCCGTGCCTGTGATCTTGGTAGAAGGAGAG AAACGCAAGCTGTCTGGCTACGGCAATGACATCCAGCTGCGTGCAGGCGGTGGCCTGGCTGACATCGCACCCACGCTGCT GCAACTGCTGGATTTACCCAAGCCCGATGCCATGTCAGGCTTAACGTTGATTCAAGCCATTGAGTCACCAACACCCTCTG CAAGACTCCCTCAACCCGTTTGA
Upstream 100 bases:
>100_bases GTAAAAGCTGACGGAAGTCAGCACAAATGCAGACCAAGACCAAAGGAGGAAGTAACTTCAATCCGGAGAAGTCCTTAATA AGCAATAGCCGAGTGTGAAC
Downstream 100 bases:
>100_bases GGCGAACGATCGCGAGCAGAGGTCAGAGCATGATCAACACATCCCTAGACTGAGGCCATGATTACCTCTGTTCTCTCCTG GGTCTGGGTCGCTTCTGGCG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSSSSSGNSRHFGRVAPVVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHTLIEASGAAVGLPDNQMGNSEVGHLT IGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHL ITDGRDTPTQSASNYLHQIEDAINASGVGELASLCGRYWAMDRDHRWERTIRAYEVLTDPNQSISRVTAEDVLSASYANG TTDEFLEPTRLSNNYFKDGDGLVMFNFRPDRARQLVQSLTLPDFDGFPRANQPSLDVVTFTQYEHDLPVAVAFPAESLDD LLGQVVSEHGLRQYRTAETEKYPHVTYFMNGGIEQPLAGEERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLV IINYANPDMVGHTGVMGAAQEAISTVDRCIGRLLDSTGRMGGTLLITADHGNAELMQGSDGQAWTAHTTNPVPVILVEGE KRKLSGYGNDIQLRAGGGLADIAPTLLQLLDLPKPDAMSGLTLIQAIESPTPSARLPQPV
Sequences:
>Translated_540_residues MSSSSSGNSRHFGRVAPVVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHTLIEASGAAVGLPDNQMGNSEVGHLT IGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHL ITDGRDTPTQSASNYLHQIEDAINASGVGELASLCGRYWAMDRDHRWERTIRAYEVLTDPNQSISRVTAEDVLSASYANG TTDEFLEPTRLSNNYFKDGDGLVMFNFRPDRARQLVQSLTLPDFDGFPRANQPSLDVVTFTQYEHDLPVAVAFPAESLDD LLGQVVSEHGLRQYRTAETEKYPHVTYFMNGGIEQPLAGEERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLV IINYANPDMVGHTGVMGAAQEAISTVDRCIGRLLDSTGRMGGTLLITADHGNAELMQGSDGQAWTAHTTNPVPVILVEGE KRKLSGYGNDIQLRAGGGLADIAPTLLQLLDLPKPDAMSGLTLIQAIESPTPSARLPQPV >Mature_539_residues SSSSSGNSRHFGRVAPVVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHTLIEASGAAVGLPDNQMGNSEVGHLTI GAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLI TDGRDTPTQSASNYLHQIEDAINASGVGELASLCGRYWAMDRDHRWERTIRAYEVLTDPNQSISRVTAEDVLSASYANGT TDEFLEPTRLSNNYFKDGDGLVMFNFRPDRARQLVQSLTLPDFDGFPRANQPSLDVVTFTQYEHDLPVAVAFPAESLDDL LGQVVSEHGLRQYRTAETEKYPHVTYFMNGGIEQPLAGEERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLVI INYANPDMVGHTGVMGAAQEAISTVDRCIGRLLDSTGRMGGTLLITADHGNAELMQGSDGQAWTAHTTNPVPVILVEGEK RKLSGYGNDIQLRAGGGLADIAPTLLQLLDLPKPDAMSGLTLIQAIESPTPSARLPQPV
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=46.3035019455253, Blast_Score=471, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17507741, Length=516, Percent_Identity=41.2790697674419, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI32564249, Length=520, Percent_Identity=41.1538461538462, Blast_Score=392, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_PROM3 (A2C700)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016525.1 - ProteinModelPortal: A2C700 - SMR: A2C700 - STRING: A2C700 - GeneID: 4778931 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_05081 - eggNOG: COG0696 - HOGENOM: HBG613255 - OMA: DHGNAEL - ProtClustDB: PRK05434 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 58317; Mature: 58186
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: ACT_SITE 74-74
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSSSGNSRHFGRVAPVVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHTLIEAS CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCC GAAVGLPDNQMGNSEVGHLTIGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSD CCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLITDGRDTPTQSASNYLHQIE CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH DAINASGVGELASLCGRYWAMDRDHRWERTIRAYEVLTDPNQSISRVTAEDVLSASYANG HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC TTDEFLEPTRLSNNYFKDGDGLVMFNFRPDRARQLVQSLTLPDFDGFPRANQPSLDVVTF CHHHHCCCHHCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TQYEHDLPVAVAFPAESLDDLLGQVVSEHGLRQYRTAETEKYPHVTYFMNGGIEQPLAGE ECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC ERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLVIINYANPDMVGHTGVMGAAQ CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHH EAISTVDRCIGRLLDSTGRMGGTLLITADHGNAELMQGSDGQAWTAHTTNPVPVILVEGE HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEEECCC KRKLSGYGNDIQLRAGGGLADIAPTLLQLLDLPKPDAMSGLTLIQAIESPTPSARLPQPV CCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SSSSSGNSRHFGRVAPVVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHTLIEAS CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCC GAAVGLPDNQMGNSEVGHLTIGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSD CCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLITDGRDTPTQSASNYLHQIE CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH DAINASGVGELASLCGRYWAMDRDHRWERTIRAYEVLTDPNQSISRVTAEDVLSASYANG HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC TTDEFLEPTRLSNNYFKDGDGLVMFNFRPDRARQLVQSLTLPDFDGFPRANQPSLDVVTF CHHHHCCCHHCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TQYEHDLPVAVAFPAESLDDLLGQVVSEHGLRQYRTAETEKYPHVTYFMNGGIEQPLAGE ECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC ERHLVPSPRVATYDLAPAMSADTLTESCVKAIESGVYSLVIINYANPDMVGHTGVMGAAQ CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHH EAISTVDRCIGRLLDSTGRMGGTLLITADHGNAELMQGSDGQAWTAHTTNPVPVILVEGE HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEEECCC KRKLSGYGNDIQLRAGGGLADIAPTLLQLLDLPKPDAMSGLTLIQAIESPTPSARLPQPV CCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA