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The map label for this gene is atpF

Identifier: 124022191

GI number: 124022191

Start: 477757

End: 478275

Strand: Direct

Name: atpF

Synonym: P9303_04811

Alternate gene names: 124022191

Gene position: 477757-478275 (Clockwise)

Preceding gene: 124022190

Following gene: 124022192

Centisome position: 17.81

GC content: 51.06

Gene sequence:

>519_bases
ATGATTAGTCCTTTGTTCTTTGCCAGTGAGGGTGGTTTCGGCCTGAACCTCGACTTGTTTGACGCCAACATTGTCAATCT
GGCGATTGTTATTTTCGGTCTCTATAAATTCCTTCCTCCTTTTGTAGGGGGGATTCTTGAGCGCCGCCGAGTCGCCATTT
TGGCTGATCTTAAGGATGCCGAAGAGCGTCTGCTTAAGGCCACCGAGGCTTTGGCTCATGCCAAAAAGGATTTGGCAGCT
GCCCATCAGAAAGCCGAACAGATCCGCGAGGATTGCAAGCTTCGTGCTGAAGCCATTCGTCTTGACAGTGAAAAACGCAC
GGTTGAGGAGATGGCACGTGTTAAGCAGGGTGCTACAGCAGATCTCAATGCTGAAGCCAGTCGTGCTAGCGCTCAATTGC
GTCGAGAAGCTGCCCGTATGGCGATCGAGAATGCACTATCTGCTTTACCTGGGAAACTCAATGCCGATGCTCAAGCCCAG
TTGGTGAGTCAGTCCATCAAAAACCTTGGGGAAGCCTGA

Upstream 100 bases:

>100_bases
GTCGTGAGATTGATGCTCAGAGGGATTCGGCCCTGACTCAACTTAAGGGTGATGCAGAAAAGCTTGGTGATCTCATCGTT
AACCGCCTGCTGGCAGCCAA

Downstream 100 bases:

>100_bases
TGCCACTGCTTAATACCATTACCACCCCCTATGCCGAGGCCTTTCTTCAAGTGGCTGAAAGCCGCAAGGAAGTCGATCAG
GTGGTTGATCAGGCAAAGGC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MISPLFFASEGGFGLNLDLFDANIVNLAIVIFGLYKFLPPFVGGILERRRVAILADLKDAEERLLKATEALAHAKKDLAA
AHQKAEQIREDCKLRAEAIRLDSEKRTVEEMARVKQGATADLNAEASRASAQLRREAARMAIENALSALPGKLNADAQAQ
LVSQSIKNLGEA

Sequences:

>Translated_172_residues
MISPLFFASEGGFGLNLDLFDANIVNLAIVIFGLYKFLPPFVGGILERRRVAILADLKDAEERLLKATEALAHAKKDLAA
AHQKAEQIREDCKLRAEAIRLDSEKRTVEEMARVKQGATADLNAEASRASAQLRREAARMAIENALSALPGKLNADAQAQ
LVSQSIKNLGEA
>Mature_172_residues
MISPLFFASEGGFGLNLDLFDANIVNLAIVIFGLYKFLPPFVGGILERRRVAILADLKDAEERLLKATEALAHAKKDLAA
AHQKAEQIREDCKLRAEAIRLDSEKRTVEEMARVKQGATADLNAEASRASAQLRREAARMAIENALSALPGKLNADAQAQ
LVSQSIKNLGEA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PROM3 (A2C6X3)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016498.1
- STRING:   A2C6X3
- GeneID:   4777328
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_04811
- eggNOG:   COG0711
- HOGENOM:   HBG708990
- OMA:   ESIRMES
- ProtClustDB:   PRK07352
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18696; Mature: 18696

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1296d768)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPLFFASEGGFGLNLDLFDANIVNLAIVIFGLYKFLPPFVGGILERRRVAILADLKDA
CCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERLLKATEALAHAKKDLAAAHQKAEQIREDCKLRAEAIRLDSEKRTVEEMARVKQGATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
DLNAEASRASAQLRREAARMAIENALSALPGKLNADAQAQLVSQSIKNLGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MISPLFFASEGGFGLNLDLFDANIVNLAIVIFGLYKFLPPFVGGILERRRVAILADLKDA
CCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERLLKATEALAHAKKDLAAAHQKAEQIREDCKLRAEAIRLDSEKRTVEEMARVKQGATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
DLNAEASRASAQLRREAARMAIENALSALPGKLNADAQAQLVSQSIKNLGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA