| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022007
Identifier: 124022007
GI number: 124022007
Start: 310392
End: 312176
Strand: Reverse
Name: 124022007
Synonym: P9303_02961
Alternate gene names: NA
Gene position: 312176-310392 (Counterclockwise)
Preceding gene: 124022008
Following gene: 124022006
Centisome position: 11.64
GC content: 42.63
Gene sequence:
>1785_bases ATGAGAGATCTTTGCAAAAACCAAGTGGCTGGTTTTGGCGAACAAAAAGAAAAGAAGAGAGCCAAACGCTTAAATAAAAG CGAATCAAGAGGAGAAGCACTTCAGAAAGAAGCAATGAATTTCCATATGCAAGGAGATATCGAAAATGCCGAATATCTTT ACAGGCAAGCAATAGAAATTGGATTCTTACATGAAGCTATCTTTTCAAACTTAGGGGTCATTTGTAAAAACAGTGATAGG CAAGAAGAAGCAATTGCCCTGTATGAAAAAGCAATAGAGACAAGACCTGATCACCCAGATGCCTATAGAAATCTAGGGAA TTTGCACAAAGAGCTCGGCAACCTTGATCAAGCTCTTGCTGCCACTCTCAAATCTCTAGAGCTCAAGCCCGACAACCCCG ATGCACATATCAACCTGGGCGGCATCTACAAAGAACTCGGCAACCTTGATCAAGCTCTCACCTCAACCCTCAAATCTCTA GAGCTCAAGCCTGATAACCCCACGGCCTACATGAACCTGGGCCGCATCTACCAAGATCTCGGCAACCTTGATCAAGCTCT TGCCTCCACCCTCAAATCTCTAGAGCTCAAACCAGACAACCCCACGGCCCACATGAACCTGGGCATCATCTACAGAGATC TCAGAAACCTCGATCAAGCACTCGCATCCTCCCTTCAATCCCTACAGCTCAAACCCGATAACCACACTGCCTACATCAAC CTGGGAGTTATCTACCAAGATCTCGGCAACCTTGATCAGGCTCTTGCTTCCACCCTCAAATCTCTAGAGCTCAAGCCCGA CAACCCCACTACTCAGATGAACCTGGCCAGCATCTACAAAGATCTCGGCAACTTTGATCAAGCTCTTTATTTTTTAAGGG AAGCAGAAAAAAACGACGAGATGAAAGCCAAAGCTTCAATACTTTTAGCCCAAACTTATTACTCTATAGGGCTATATAGC GAAGGCGTAAAAGCCTTAAGTGAAACAAAAACTAAAGCAGGAAAAGGACTTCTTCTTGCCCTTTACCTGTGCCTCGACAA GAAAGTTAAATTCGATTTATGCGCAAAAGAATTAATAGCCAAAAATTGGCACACCCAAATAAGCATCGCAGCTATAGACC ATGCCAATATTGTATACAATCAAGCCCTAGACAATGGGCTTAAGGGAAGCACCTTCGATTCTATAGTGAACCAGAGAATC AATAAGCATGAATTCTCGGATACACTCCTCGAGGGAATAATCATGCATCTTTCAGCCAAGACAATTCAACCACAGCACCA AAGCCTTCTAGTCAACGGATCGCAAACATCTGGGAATATACTTGATGTACCAAAGAAGCCATTCATAGAACTAAAAAAAC TCTTAATAAAAAAACTTGAAGATTATAATCGATCATGCAGCATAAACACTGACAAAGATTTTAAGGCTAACTGGAAAAAA AATATGTACATCTTGCGAGGATGGGCGATCGTAATGGAAAAAGGCGGAAACCTTAAGTCTCATAATCATGAGCTTGGATG GCTTACCGGAACCTTTTATTTGCAAATGCCAGAAAGAGAGGCGAACTCAGAAGAAGGAGCAATTGAGTTCAGCCATCAAG GCCCAAAATACCCTCAAAAAGATTCGTCATTCGATACAAGAGTAATCCGACCAGAAGCCAGAGACTTAAACATCTTCTCC TCCTCTCTTTTTCACAGGACCCTGCCATTTCAATCCAACACGCAAAGAATCTGTATTGCATTTGACCTCCAGAAAAATGA AAAGCTTTGGGTTGACTCTAATTAG
Upstream 100 bases:
>100_bases GATCACGGCTCGGATGCAGCACAAACTCGAACGGCAGCGTATCAAGTGCGGGAGTGGGGTCGGGAAGACGTGAAACCGGC TGGATCCATGGCATAAAGTC
Downstream 100 bases:
>100_bases CATCCGTTAACACAACCAAGAAATATTTCAAGGCCCAAACATGTTACTTCAAAAGAATGCGATGTCTAACACAACAAAGT CTGGCTAGCCAAGTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MRDLCKNQVAGFGEQKEKKRAKRLNKSESRGEALQKEAMNFHMQGDIENAEYLYRQAIEIGFLHEAIFSNLGVICKNSDR QEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSL ELKPDNPTAYMNLGRIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLDQALASSLQSLQLKPDNHTAYIN LGVIYQDLGNLDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQALYFLREAEKNDEMKAKASILLAQTYYSIGLYS EGVKALSETKTKAGKGLLLALYLCLDKKVKFDLCAKELIAKNWHTQISIAAIDHANIVYNQALDNGLKGSTFDSIVNQRI NKHEFSDTLLEGIIMHLSAKTIQPQHQSLLVNGSQTSGNILDVPKKPFIELKKLLIKKLEDYNRSCSINTDKDFKANWKK NMYILRGWAIVMEKGGNLKSHNHELGWLTGTFYLQMPEREANSEEGAIEFSHQGPKYPQKDSSFDTRVIRPEARDLNIFS SSLFHRTLPFQSNTQRICIAFDLQKNEKLWVDSN
Sequences:
>Translated_594_residues MRDLCKNQVAGFGEQKEKKRAKRLNKSESRGEALQKEAMNFHMQGDIENAEYLYRQAIEIGFLHEAIFSNLGVICKNSDR QEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSL ELKPDNPTAYMNLGRIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLDQALASSLQSLQLKPDNHTAYIN LGVIYQDLGNLDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQALYFLREAEKNDEMKAKASILLAQTYYSIGLYS EGVKALSETKTKAGKGLLLALYLCLDKKVKFDLCAKELIAKNWHTQISIAAIDHANIVYNQALDNGLKGSTFDSIVNQRI NKHEFSDTLLEGIIMHLSAKTIQPQHQSLLVNGSQTSGNILDVPKKPFIELKKLLIKKLEDYNRSCSINTDKDFKANWKK NMYILRGWAIVMEKGGNLKSHNHELGWLTGTFYLQMPEREANSEEGAIEFSHQGPKYPQKDSSFDTRVIRPEARDLNIFS SSLFHRTLPFQSNTQRICIAFDLQKNEKLWVDSN >Mature_594_residues MRDLCKNQVAGFGEQKEKKRAKRLNKSESRGEALQKEAMNFHMQGDIENAEYLYRQAIEIGFLHEAIFSNLGVICKNSDR QEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSL ELKPDNPTAYMNLGRIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLDQALASSLQSLQLKPDNHTAYIN LGVIYQDLGNLDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQALYFLREAEKNDEMKAKASILLAQTYYSIGLYS EGVKALSETKTKAGKGLLLALYLCLDKKVKFDLCAKELIAKNWHTQISIAAIDHANIVYNQALDNGLKGSTFDSIVNQRI NKHEFSDTLLEGIIMHLSAKTIQPQHQSLLVNGSQTSGNILDVPKKPFIELKKLLIKKLEDYNRSCSINTDKDFKANWKK NMYILRGWAIVMEKGGNLKSHNHELGWLTGTFYLQMPEREANSEEGAIEFSHQGPKYPQKDSSFDTRVIRPEARDLNIFS SSLFHRTLPFQSNTQRICIAFDLQKNEKLWVDSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=287, Percent_Identity=29.9651567944251, Blast_Score=125, Evalue=2e-28, Organism=Homo sapiens, GI32307150, Length=287, Percent_Identity=29.9651567944251, Blast_Score=125, Evalue=2e-28, Organism=Homo sapiens, GI118766328, Length=284, Percent_Identity=27.112676056338, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI118766330, Length=284, Percent_Identity=27.112676056338, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI301336134, Length=274, Percent_Identity=25.1824817518248, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI83415184, Length=274, Percent_Identity=25.1824817518248, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI224028289, Length=299, Percent_Identity=27.0903010033445, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI224809432, Length=209, Percent_Identity=29.6650717703349, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI22749211, Length=244, Percent_Identity=27.4590163934426, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI170784867, Length=262, Percent_Identity=24.8091603053435, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115532692, Length=233, Percent_Identity=31.7596566523605, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI115532690, Length=233, Percent_Identity=31.7596566523605, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25147174, Length=231, Percent_Identity=23.8095238095238, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71987213, Length=199, Percent_Identity=28.643216080402, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI17647755, Length=287, Percent_Identity=31.0104529616725, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24585827, Length=287, Percent_Identity=31.0104529616725, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24585829, Length=287, Percent_Identity=31.0104529616725, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24647123, Length=261, Percent_Identity=26.4367816091954, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI281364285, Length=295, Percent_Identity=27.1186440677966, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581187, Length=295, Percent_Identity=27.1186440677966, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920486, Length=276, Percent_Identity=26.0869565217391, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI161076610, Length=276, Percent_Identity=26.0869565217391, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24656717, Length=174, Percent_Identity=32.7586206896552, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI18110006, Length=174, Percent_Identity=32.7586206896552, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 67032; Mature: 67032
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLCKNQVAGFGEQKEKKRAKRLNKSESRGEALQKEAMNFHMQGDIENAEYLYRQAIEI CCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHH GFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALA HHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH ATLKSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSLELKPDNPTAYMNLGRIYQDL HHHHHCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLDQALASSLQSLQLKPDNHTAYIN HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LGVIYQDLGNLDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQALYFLREAEKNDE ECHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH MKAKASILLAQTYYSIGLYSEGVKALSETKTKAGKGLLLALYLCLDKKVKFDLCAKELIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH KNWHTQISIAAIDHANIVYNQALDNGLKGSTFDSIVNQRINKHEFSDTLLEGIIMHLSAK CCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIQPQHQSLLVNGSQTSGNILDVPKKPFIELKKLLIKKLEDYNRSCSINTDKDFKANWKK CCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NMYILRGWAIVMEKGGNLKSHNHELGWLTGTFYLQMPEREANSEEGAIEFSHQGPKYPQK CEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCC DSSFDTRVIRPEARDLNIFSSSLFHRTLPFQSNTQRICIAFDLQKNEKLWVDSN CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCC >Mature Secondary Structure MRDLCKNQVAGFGEQKEKKRAKRLNKSESRGEALQKEAMNFHMQGDIENAEYLYRQAIEI CCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHH GFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALA HHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH ATLKSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSLELKPDNPTAYMNLGRIYQDL HHHHHCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLDQALASSLQSLQLKPDNHTAYIN HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LGVIYQDLGNLDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQALYFLREAEKNDE ECHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH MKAKASILLAQTYYSIGLYSEGVKALSETKTKAGKGLLLALYLCLDKKVKFDLCAKELIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH KNWHTQISIAAIDHANIVYNQALDNGLKGSTFDSIVNQRINKHEFSDTLLEGIIMHLSAK CCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIQPQHQSLLVNGSQTSGNILDVPKKPFIELKKLLIKKLEDYNRSCSINTDKDFKANWKK CCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NMYILRGWAIVMEKGGNLKSHNHELGWLTGTFYLQMPEREANSEEGAIEFSHQGPKYPQK CEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCC DSSFDTRVIRPEARDLNIFSSSLFHRTLPFQSNTQRICIAFDLQKNEKLWVDSN CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]