Click here to switch to the map view.

The map label for this gene is 124022008

Identifier: 124022008

GI number: 124022008

Start: 312204

End: 313607

Strand: Reverse

Name: 124022008

Synonym: P9303_02971

Alternate gene names: NA

Gene position: 313607-312204 (Counterclockwise)

Preceding gene: 124022009

Following gene: 124022007

Centisome position: 11.69

GC content: 50.5

Gene sequence:

>1404_bases
GTGTGCAAGCAAGCCTGGAAGTGGATGCTCCCCATACTTCTAGGGTGTGCAAGTTGCAGCAAAGTTGGATCTGTACAGGG
CAATGCCCCTACGGAACTGCCCTTACCTGAAAGGATCCAGGTGGTTTTCAACCATCGCGATGCTGCGCGATACCGCAGTC
CTCTTGATGATCAGTGGCGCAACGGCGACAACCTTGAGAAGTTCGTCATCACTGCCATAGAAAAAGCGCAGCAAGAGATT
CTTGTGGCCGTGCAAGAACTCAGCTTGCCTGGAATAGCAGACGCACTCGTCGCAGCCAAGCAACGGGGCGTGACCGTGCA
AATGGTGATCGAAAACAGCTTTAGCCAGCCCTGGGGTGATCTACATGAAGCAGATCTGTCCCTTCATGAACGCCGTCGAG
TGGCCCATCTAAAGATGTTGGCAGATCGTAATCACGACGGGGAGCTAAGCCCCACAGAACGCTATCGCGGCGATGCGATG
CAAATCCTCAGGCGTCATCAAATCCCTTTGATTGATGACAGCGAAGACGGCAGCAAAGGCAGCGGACTTATGCATCACAA
ATTCTTGGTTATCGATACTCAAAGGGTGATTACTGGAAGTGCAAACTTCAGCAATTCAGGCATACATGGAGATCCCGCAG
CGATACAAACGCGCGGCAATGTCAACCACTTGCTGAGCTTTAACAGTACAGAACTAGCTGAACTATTCAAAAAGGAGTTC
CTTTTGATGTGGGGCGATGGTCCGGGGGGTGCAAAAGACAGCCTGTTTGGCTTAGCCAAACACGCGCCTGGCATTCAAAC
TGCAAAGGTTGGGGGGACCCGAATTGAAGTGCTCTTCGCTCCACATGCAAAACGACAAAAGATGAACGGCCTGCAATTCA
TTGCCAAGCAAATAGAAACATCAAAACAAAACATCGATATGGCCTTGTTCATCTTTTCTGCACAAGGTTTAGTTAACAAG
CTACGGGAGCAGGTGCAAAGCGGTGTGAAGATACGATTAATCGCTGATCCTGGCTTTGCCAGCCGTTCCTATTCAGAAGT
ACTGGACTTATTAGCTGTTTCCCTTCCAGATCACCATTGCAAAATCGAAGCAGGTAATAACCCATTTGATTCACCTCTTA
AGGGTGTAGGCACGCCACGTCTCGCTCGAGGTGACAAGCTGCATCACAAGTTTGCGGTGATCGACAACAAAAAAGTAATC
ACAGGCTCATTCAATTGGAGTCCTGCTGCAGCTCACACCAACGATGAAACCCTGATGGTGATTCACTCTCCAAAGCTTGC
CAAACACTTCACCCGTGAGATGAATCGACTGTGGCGAGGAGCGGAACTTGGGATCACGGCTCGGATGCAGCACAAACTCG
AACGGCAGCGTATCAAGTGCGGGAGTGGGGTCGGGAAGACGTGA

Upstream 100 bases:

>100_bases
ATCTGGTTCGTCGCCATGCTGCGCACCGCAGAAATGCCCCATTAACAAACTGGGGCGAAATCAAGGTGGAACCCTATTAG
CGAGTGGTTGAGGTCAAAAG

Downstream 100 bases:

>100_bases
AACCGGCTGGATCCATGGCATAAAGTCATGAGAGATCTTTGCAAAAACCAAGTGGCTGGTTTTGGCGAACAAAAAGAAAA
GAAGAGAGCCAAACGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Hairpin-Helix Motif Protein; Phospholipase D/Competence Protein ComEA; Phospholipase D Active Site Motif Domain Protein; Phospholipase D Family Protein; Phospholipase D Domain-Containing Protein; Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; Phospholipase D Domain Protein; Endonuclease

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MCKQAWKWMLPILLGCASCSKVGSVQGNAPTELPLPERIQVVFNHRDAARYRSPLDDQWRNGDNLEKFVITAIEKAQQEI
LVAVQELSLPGIADALVAAKQRGVTVQMVIENSFSQPWGDLHEADLSLHERRRVAHLKMLADRNHDGELSPTERYRGDAM
QILRRHQIPLIDDSEDGSKGSGLMHHKFLVIDTQRVITGSANFSNSGIHGDPAAIQTRGNVNHLLSFNSTELAELFKKEF
LLMWGDGPGGAKDSLFGLAKHAPGIQTAKVGGTRIEVLFAPHAKRQKMNGLQFIAKQIETSKQNIDMALFIFSAQGLVNK
LREQVQSGVKIRLIADPGFASRSYSEVLDLLAVSLPDHHCKIEAGNNPFDSPLKGVGTPRLARGDKLHHKFAVIDNKKVI
TGSFNWSPAAAHTNDETLMVIHSPKLAKHFTREMNRLWRGAELGITARMQHKLERQRIKCGSGVGKT

Sequences:

>Translated_467_residues
MCKQAWKWMLPILLGCASCSKVGSVQGNAPTELPLPERIQVVFNHRDAARYRSPLDDQWRNGDNLEKFVITAIEKAQQEI
LVAVQELSLPGIADALVAAKQRGVTVQMVIENSFSQPWGDLHEADLSLHERRRVAHLKMLADRNHDGELSPTERYRGDAM
QILRRHQIPLIDDSEDGSKGSGLMHHKFLVIDTQRVITGSANFSNSGIHGDPAAIQTRGNVNHLLSFNSTELAELFKKEF
LLMWGDGPGGAKDSLFGLAKHAPGIQTAKVGGTRIEVLFAPHAKRQKMNGLQFIAKQIETSKQNIDMALFIFSAQGLVNK
LREQVQSGVKIRLIADPGFASRSYSEVLDLLAVSLPDHHCKIEAGNNPFDSPLKGVGTPRLARGDKLHHKFAVIDNKKVI
TGSFNWSPAAAHTNDETLMVIHSPKLAKHFTREMNRLWRGAELGITARMQHKLERQRIKCGSGVGKT
>Mature_467_residues
MCKQAWKWMLPILLGCASCSKVGSVQGNAPTELPLPERIQVVFNHRDAARYRSPLDDQWRNGDNLEKFVITAIEKAQQEI
LVAVQELSLPGIADALVAAKQRGVTVQMVIENSFSQPWGDLHEADLSLHERRRVAHLKMLADRNHDGELSPTERYRGDAM
QILRRHQIPLIDDSEDGSKGSGLMHHKFLVIDTQRVITGSANFSNSGIHGDPAAIQTRGNVNHLLSFNSTELAELFKKEF
LLMWGDGPGGAKDSLFGLAKHAPGIQTAKVGGTRIEVLFAPHAKRQKMNGLQFIAKQIETSKQNIDMALFIFSAQGLVNK
LREQVQSGVKIRLIADPGFASRSYSEVLDLLAVSLPDHHCKIEAGNNPFDSPLKGVGTPRLARGDKLHHKFAVIDNKKVI
TGSFNWSPAAAHTNDETLMVIHSPKLAKHFTREMNRLWRGAELGITARMQHKLERQRIKCGSGVGKT

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51750; Mature: 51750

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKQAWKWMLPILLGCASCSKVGSVQGNAPTELPLPERIQVVFNHRDAARYRSPLDDQWR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEECCCHHHHHCCCCCHHHC
NGDNLEKFVITAIEKAQQEILVAVQELSLPGIADALVAAKQRGVTVQMVIENSFSQPWGD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCC
LHEADLSLHERRRVAHLKMLADRNHDGELSPTERYRGDAMQILRRHQIPLIDDSEDGSKG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHCCCCCEECCCCCCCC
SGLMHHKFLVIDTQRVITGSANFSNSGIHGDPAAIQTRGNVNHLLSFNSTELAELFKKEF
CCCEEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHCE
LLMWGDGPGGAKDSLFGLAKHAPGIQTAKVGGTRIEVLFAPHAKRQKMNGLQFIAKQIET
EEEECCCCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
SKQNIDMALFIFSAQGLVNKLREQVQSGVKIRLIADPGFASRSYSEVLDLLAVSLPDHHC
HHCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEE
KIEAGNNPFDSPLKGVGTPRLARGDKLHHKFAVIDNKKVITGSFNWSPAAAHTNDETLMV
EEECCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCEEEE
IHSPKLAKHFTREMNRLWRGAELGITARMQHKLERQRIKCGSGVGKT
EECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCKQAWKWMLPILLGCASCSKVGSVQGNAPTELPLPERIQVVFNHRDAARYRSPLDDQWR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEECCCHHHHHCCCCCHHHC
NGDNLEKFVITAIEKAQQEILVAVQELSLPGIADALVAAKQRGVTVQMVIENSFSQPWGD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCC
LHEADLSLHERRRVAHLKMLADRNHDGELSPTERYRGDAMQILRRHQIPLIDDSEDGSKG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHCCCCCEECCCCCCCC
SGLMHHKFLVIDTQRVITGSANFSNSGIHGDPAAIQTRGNVNHLLSFNSTELAELFKKEF
CCCEEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHCE
LLMWGDGPGGAKDSLFGLAKHAPGIQTAKVGGTRIEVLFAPHAKRQKMNGLQFIAKQIET
EEEECCCCCCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
SKQNIDMALFIFSAQGLVNKLREQVQSGVKIRLIADPGFASRSYSEVLDLLAVSLPDHHC
HHCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEE
KIEAGNNPFDSPLKGVGTPRLARGDKLHHKFAVIDNKKVITGSFNWSPAAAHTNDETLMV
EEECCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCEEEE
IHSPKLAKHFTREMNRLWRGAELGITARMQHKLERQRIKCGSGVGKT
EECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA