| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is citT [C]
Identifier: 124021969
GI number: 124021969
Start: 267209
End: 269029
Strand: Reverse
Name: citT [C]
Synonym: P9303_02561
Alternate gene names: 124021969
Gene position: 269029-267209 (Counterclockwise)
Preceding gene: 124021970
Following gene: 124021968
Centisome position: 10.03
GC content: 56.51
Gene sequence:
>1821_bases ATGGCTGTGCTGAGCACCGCTATTCAAAACCCCCAAGCCCTCATCACCCTGGCGGTGTTGTTGCTGGCGGTGGTGCTCTT CATCAGCGGTGCCCTTGCACCTGAACTCACTGGCCTGCTGAGCATGGCACTGCTGATGGCCACAGGCGTCCTAACTCCCC AACAAGCCCTGGCTGGATTTGGCAGGCCTGCCCTTATTACGCTAATGGGCCTATTCGCCGTCTCAGCAGCCTTATTCCGC AGTGGTGCCCTGGATCGCGTGCGCGAACTGATCGCATCCGAGCGCATTCGCAGCCCACGCCGGTTGATTGCCTTGTTGGG TCTAGTGGTCGCTCCCATTTCGAGTGTCCTCCCAAACACACCCGTCGTCGCCTCGTTGCTACCTGTCATCGAAGCCTGGT GTCATCGACGCCGGATCTCTCCGTCTAAGGTCCTGCTACCACTATCTTTCGCAGCGCTTTTCGGCAGCACACTCACACTG CTGGGGAGTTCAGTGAATCTGCTGGTCAGTGACATCAGCGAGCAACTGGGCAATGGATCTCTAGAACTGTTCAGCTTCAC AGCCATCGGCGTGCCGATCTGGCTCGCTGGCACCACCTATCTCATGCTTGCCCCTCAGGCCCTGTTGCCAGATCGTGGCA GCAACAGCGATGAACTAGGAGACAACAAAGACCAGACCGGTTACTTCACAGAGGTCACCATCCCCCAGAACTCGCAACTG GTAGGACAATCCCTGCACAACAGTCGTTTACAACGTCGTTTTGATGTAGACGTGCTGGAACTGCAAAGAGGTCGAGAACG ACTCCTACCGCCCCTGGCTGATCGCAGACTTGAACCTGGCGACCGACTTCTTCTCAGGGTCACCCGCGCAGACCTACTAC GTCTCCAACAAGAACACAACGTACAGCTAGCAACAAGAGAGTCGATCGCTCCGTCATCACTTTCCCCATCTGGCCTGGGC GAAGGGCAAAGAACTGTGGAAGTCCTCCTACCGGCAGGCTCAACTTTGGCTGGTGCAAGTCTGCGTGAACTGCGATTTCG GCAACGCCACAACGCCACAGTTCTTGCCCTCAGGCGTGGTCAGCAAACAGTGCAAGAGCGTCTTGGACAAGCTGTACTAC GCGAAGGCGATGTCTTACTGCTGCAAGCCCCACTGGACTCCATTCGCGGCCTGCAAGCCAGCAATGATTTGCTGGTCCTG GATCAGCTGGAAAACGACCTGCCCACAGTGCGCCGCAAACCACTGACCATCGCCATTGCTTTGGCCATGCTGATCATGCC GACAGTGACTGCCCTGCCACTGGTGGCAGCGGTCCTACTTGCTGCAGTCGCGATGGTGGCAGGAGGATGCCTTCGTCCAG GGGAACTTCAGCGATCAATTCGTCTCGATGTGATTCTGCTGCTGGGGTCGCTCTCCAGCTTCAGCGTGGCCATGCAGAAA ACCGGCCTAGCAGATGCTCTGGCAAGCAGCTTTGAAACCTTGCTGAATGACTGGTCCAACTACTTAGCCTTACTAGTCAT CTTTCTGGTCACCACGCTCCTCACCCAGGTGATGAGCCCAGCCGCATCCGTTGCACTACTTGTCCCAGTAGCCATCCAAC TCGCACCTGGACTAGACCTTGTACCCAATGCACTGGTCTTCACCGTGCTATTTGGTGCAAGCCAGTCTTTTCTGACACCA ATGGGGCATCAGACAAACCTGATGGTGTTCGGTCCTGGGCGTTATCGATTTCTGGATGTAACCCGTTACGGAGCTGGCCT AACGGCCCTGATGACCGTGATGATTCCTGGGCTGATCCTTTGGCATTTCGGCGGATCTTGA
Upstream 100 bases:
>100_bases CCTCAGGTGCCGGGCTGCAAGGACTAAAACACTGGCTGAAGGATCAATTCTGGGGTCACAAAGCAGAATCGGCCCCTCTG CCTTCTGTAAATACCTAACT
Downstream 100 bases:
>100_bases ATACAGCAGAACTGTGCCAGCATTTGCAGAATCTGGTTCTATCCGTCTGGGGAGAATCCTCAGGACAACCTTTGACTCTC GTCGCGATAAAGCGGTAATC
Product: sodium/sulfate transporter DASS family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MAVLSTAIQNPQALITLAVLLLAVVLFISGALAPELTGLLSMALLMATGVLTPQQALAGFGRPALITLMGLFAVSAALFR SGALDRVRELIASERIRSPRRLIALLGLVVAPISSVLPNTPVVASLLPVIEAWCHRRRISPSKVLLPLSFAALFGSTLTL LGSSVNLLVSDISEQLGNGSLELFSFTAIGVPIWLAGTTYLMLAPQALLPDRGSNSDELGDNKDQTGYFTEVTIPQNSQL VGQSLHNSRLQRRFDVDVLELQRGRERLLPPLADRRLEPGDRLLLRVTRADLLRLQQEHNVQLATRESIAPSSLSPSGLG EGQRTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAVLREGDVLLLQAPLDSIRGLQASNDLLVL DQLENDLPTVRRKPLTIAIALAMLIMPTVTALPLVAAVLLAAVAMVAGGCLRPGELQRSIRLDVILLLGSLSSFSVAMQK TGLADALASSFETLLNDWSNYLALLVIFLVTTLLTQVMSPAASVALLVPVAIQLAPGLDLVPNALVFTVLFGASQSFLTP MGHQTNLMVFGPGRYRFLDVTRYGAGLTALMTVMIPGLILWHFGGS
Sequences:
>Translated_606_residues MAVLSTAIQNPQALITLAVLLLAVVLFISGALAPELTGLLSMALLMATGVLTPQQALAGFGRPALITLMGLFAVSAALFR SGALDRVRELIASERIRSPRRLIALLGLVVAPISSVLPNTPVVASLLPVIEAWCHRRRISPSKVLLPLSFAALFGSTLTL LGSSVNLLVSDISEQLGNGSLELFSFTAIGVPIWLAGTTYLMLAPQALLPDRGSNSDELGDNKDQTGYFTEVTIPQNSQL VGQSLHNSRLQRRFDVDVLELQRGRERLLPPLADRRLEPGDRLLLRVTRADLLRLQQEHNVQLATRESIAPSSLSPSGLG EGQRTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAVLREGDVLLLQAPLDSIRGLQASNDLLVL DQLENDLPTVRRKPLTIAIALAMLIMPTVTALPLVAAVLLAAVAMVAGGCLRPGELQRSIRLDVILLLGSLSSFSVAMQK TGLADALASSFETLLNDWSNYLALLVIFLVTTLLTQVMSPAASVALLVPVAIQLAPGLDLVPNALVFTVLFGASQSFLTP MGHQTNLMVFGPGRYRFLDVTRYGAGLTALMTVMIPGLILWHFGGS >Mature_605_residues AVLSTAIQNPQALITLAVLLLAVVLFISGALAPELTGLLSMALLMATGVLTPQQALAGFGRPALITLMGLFAVSAALFRS GALDRVRELIASERIRSPRRLIALLGLVVAPISSVLPNTPVVASLLPVIEAWCHRRRISPSKVLLPLSFAALFGSTLTLL GSSVNLLVSDISEQLGNGSLELFSFTAIGVPIWLAGTTYLMLAPQALLPDRGSNSDELGDNKDQTGYFTEVTIPQNSQLV GQSLHNSRLQRRFDVDVLELQRGRERLLPPLADRRLEPGDRLLLRVTRADLLRLQQEHNVQLATRESIAPSSLSPSGLGE GQRTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRGQQTVQERLGQAVLREGDVLLLQAPLDSIRGLQASNDLLVLD QLENDLPTVRRKPLTIAIALAMLIMPTVTALPLVAAVLLAAVAMVAGGCLRPGELQRSIRLDVILLLGSLSSFSVAMQKT GLADALASSFETLLNDWSNYLALLVIFLVTTLLTQVMSPAASVALLVPVAIQLAPGLDLVPNALVFTVLFGASQSFLTPM GHQTNLMVFGPGRYRFLDVTRYGAGLTALMTVMIPGLILWHFGGS
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK C-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1788629, Length=607, Percent_Identity=26.1943986820428, Blast_Score=171, Evalue=9e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 - InterPro: IPR006037 [H]
Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 64916; Mature: 64785
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS01271 NA_SULFATE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLSTAIQNPQALITLAVLLLAVVLFISGALAPELTGLLSMALLMATGVLTPQQALAGF CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCC GRPALITLMGLFAVSAALFRSGALDRVRELIASERIRSPRRLIALLGLVVAPISSVLPNT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC PVVASLLPVIEAWCHRRRISPSKVLLPLSFAALFGSTLTLLGSSVNLLVSDISEQLGNGS CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC LELFSFTAIGVPIWLAGTTYLMLAPQALLPDRGSNSDELGDNKDQTGYFTEVTIPQNSQL EEEEEEHHHCCCHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH VGQSLHNSRLQRRFDVDVLELQRGRERLLPPLADRRLEPGDRLLLRVTRADLLRLQQEHN HHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC VQLATRESIAPSSLSPSGLGEGQRTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRG CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCHHHHHHHHHHHCCCEEEEECCC QQTVQERLGQAVLREGDVLLLQAPLDSIRGLQASNDLLVLDQLENDLPTVRRKPLTIAIA HHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCEEEEEHHCCCCCHHHCCCHHHHHH LAMLIMPTVTALPLVAAVLLAAVAMVAGGCLRPGELQRSIRLDVILLLGSLSSFSVAMQK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TGLADALASSFETLLNDWSNYLALLVIFLVTTLLTQVMSPAASVALLVPVAIQLAPGLDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCH VPNALVFTVLFGASQSFLTPMGHQTNLMVFGPGRYRFLDVTRYGAGLTALMTVMIPGLIL HHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCCEEEEEEHHHCCHHHHHHHHHHHHHHH WHFGGS HCCCCC >Mature Secondary Structure AVLSTAIQNPQALITLAVLLLAVVLFISGALAPELTGLLSMALLMATGVLTPQQALAGF CCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCC GRPALITLMGLFAVSAALFRSGALDRVRELIASERIRSPRRLIALLGLVVAPISSVLPNT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC PVVASLLPVIEAWCHRRRISPSKVLLPLSFAALFGSTLTLLGSSVNLLVSDISEQLGNGS CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC LELFSFTAIGVPIWLAGTTYLMLAPQALLPDRGSNSDELGDNKDQTGYFTEVTIPQNSQL EEEEEEHHHCCCHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHH VGQSLHNSRLQRRFDVDVLELQRGRERLLPPLADRRLEPGDRLLLRVTRADLLRLQQEHN HHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC VQLATRESIAPSSLSPSGLGEGQRTVEVLLPAGSTLAGASLRELRFRQRHNATVLALRRG CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCHHHHHHHHHHHCCCEEEEECCC QQTVQERLGQAVLREGDVLLLQAPLDSIRGLQASNDLLVLDQLENDLPTVRRKPLTIAIA HHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCEEEEEHHCCCCCHHHCCCHHHHHH LAMLIMPTVTALPLVAAVLLAAVAMVAGGCLRPGELQRSIRLDVILLLGSLSSFSVAMQK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TGLADALASSFETLLNDWSNYLALLVIFLVTTLLTQVMSPAASVALLVPVAIQLAPGLDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCH VPNALVFTVLFGASQSFLTPMGHQTNLMVFGPGRYRFLDVTRYGAGLTALMTVMIPGLIL HHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCCEEEEEEHHHCCHHHHHHHHHHHHHHH WHFGGS HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]