| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hflX [H]
Identifier: 124021970
GI number: 124021970
Start: 269032
End: 270708
Strand: Reverse
Name: hflX [H]
Synonym: P9303_02571
Alternate gene names: 124021970
Gene position: 270708-269032 (Counterclockwise)
Preceding gene: 124021971
Following gene: 124021969
Centisome position: 10.09
GC content: 55.34
Gene sequence:
>1677_bases TTGAAACAAGCCCACCTAGCTGGCCGCACCAAGGGACTACGCCCTTCACAACAAAGACAATTAGAACGCCTCAGCCACCG CAGGCATCCCGAAAGGGAAGGCGCCGATCAGCTAACCCTGGAACGGCTAGCTGAACAGGTGATTGAGCTATGCCAACCAC TCCATTTAGTGCTGGATAGCCGTGGATTGTGCCGCCTTCTTTGGGTCGGTCCTCTCGATGGATCCGGCCAACTTCTCGCC CATCTTCCTGAATCACCCCGTCGCAAGACCGCTGGATGGCGCTTAATCAGCTGCTCTCTAACGCTTCAGCGAAACAACCT CAGGCCAGAACAACATGATGCAATCGTGGCACTCGATCTAGCACCGAACTCCTGGCTACGTTTTGCCCCCACAGCAGATC GAGGAGGTCGCAGGATTGCTGCCCTCTGGCAACCAGATCCAAAGGAGATCTCGGGATGGAGCTTGATCGAAGCCAACGGA CTAAGCGAGCTCTGCCAACACAGCCAAGGATCAACCGCCAAGCCAGAAGTCAACCCCCTACCGTCAAAGGACGGTAGGGA ACGGGTCCTACTACTTACCCTTACGGGACCAAAGCAAAGCCGCAGCGAACGCGACCTTGCTGAGCTCGAGGGGTTGGTGC GCAGTGCAGGGGGGCATCCTGTAGCAGTTGTGCGACAAAAGCAGGGGGCTCCTAATCCTCAGACCCTCTGGGGCAAGGGG AAACTACAAGAGACCGCCTTGGAAGTTCGGCGACATAGCGCTTCTCTAGTGATCACAGACCGTGAGCTCAGTCCTGTTCA AGTCAGGAATCTGGAGCGATATCTCGACTGCCCTGTCATGGATCGAAGTGAATTAATCCTAGACATCTTTGCCCAGCGCG CCTCTAGTGCAGCAGGCCGCCTTCAAGTGGAACTAGCCCAACTTCGCTATCGCATGCCAAGGCTGATGGGGCGAGGTCGC AGCCTATCCCGTCAGGGAGGTGGCATCGGCACACGCGGGCCCGGAGAGACCCAACTCGAGAAAGACCGGCGTGCGATTAC ACGACGCATCGAGCACTTGTTACGTGAGGTACGGCAACTGCAAAACCATCGCGCCCGACTACGCAACCGCAGGGAAGGTC TGCCAAGGGTTGCACTCGTGGGTTATACCAATGCGGGGAAATCATCCCTACTCAATGCTCTCTGCAGTCGAAACGAGCAC AGCAAAGTGCTGGCAGAGAACAAACTGTTTGCAACCTTGGATCCAACCACCCGACGATTCTTGATTCCTCAGACAGGTGG AAAACCCCTTGAGCTTCTTATCACAGACACTGTGGGCTTCATCCGTGAACTGCCAGCGCCATTAGTGGAAGCCTTTCGGG CCACTCTGGAGGAAACTCTTGAAGCCGATCTCCTCCTAGTGGTTGTGGACTTGTCAGACACAGACTGGCAAGCCCAACTT GACACAGTGCATCAGTTGCTTAATTCCCTTGGCGCAGAATCAATCCGGCAGGTGATAGCCAATCAAATTGATCGTTGTGA TACCAGTGCACTTGAGGAAATCCGCAGCATCGACCCGAAGGTGATTTATCTCTCCGCGGCCTCAGGTGCCGGGCTGCAAG GACTAAAACACTGGCTGAAGGATCAATTCTGGGGTCACAAAGCAGAATCGGCCCCTCTGCCTTCTGTAAATACCTAA
Upstream 100 bases:
>100_bases CAGGTCCTCTGGCTTTCCAAATACGCCGGGGTGCCTATCTAACAAAACTACCTGGATTGTCTCTAGGCCTGCGCTCAGGC GGAGCCTGGCTGCTCGGACA
Downstream 100 bases:
>100_bases CTATGGCTGTGCTGAGCACCGCTATTCAAAACCCCCAAGCCCTCATCACCCTGGCGGTGTTGTTGCTGGCGGTGGTGCTC TTCATCAGCGGTGCCCTTGC
Product: GTP-binding protein, transport associated
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEQVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKTAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTADRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTAKPEVNPLPSKDGRERVLLLTLTGPKQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELSPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH SKVLAENKLFATLDPTTRRFLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGAESIRQVIANQIDRCDTSALEEIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHKAESAPLPSVNT
Sequences:
>Translated_558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEQVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKTAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTADRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTAKPEVNPLPSKDGRERVLLLTLTGPKQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELSPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH SKVLAENKLFATLDPTTRRFLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGAESIRQVIANQIDRCDTSALEEIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHKAESAPLPSVNT >Mature_558_residues MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEQVIELCQPLHLVLDSRGLCRLLWVGPLDGSGQLLA HLPESPRRKTAGWRLISCSLTLQRNNLRPEQHDAIVALDLAPNSWLRFAPTADRGGRRIAALWQPDPKEISGWSLIEANG LSELCQHSQGSTAKPEVNPLPSKDGRERVLLLTLTGPKQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG KLQETALEVRRHSASLVITDRELSPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGRLQVELAQLRYRMPRLMGRGR SLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQLQNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEH SKVLAENKLFATLDPTTRRFLIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL DTVHQLLNSLGAESIRQVIANQIDRCDTSALEEIRSIDPKVIYLSAASGAGLQGLKHWLKDQFWGHKAESAPLPSVNT
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=237, Percent_Identity=32.4894514767932, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI310133116, Length=220, Percent_Identity=33.1818181818182, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310124269, Length=212, Percent_Identity=33.0188679245283, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI310124267, Length=212, Percent_Identity=33.0188679245283, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI310124171, Length=212, Percent_Identity=33.0188679245283, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI310124169, Length=212, Percent_Identity=33.0188679245283, Blast_Score=86, Evalue=7e-17, Organism=Escherichia coli, GI1790615, Length=356, Percent_Identity=43.8202247191011, Blast_Score=254, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17561038, Length=317, Percent_Identity=29.0220820189274, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24650079, Length=357, Percent_Identity=35.2941176470588, Blast_Score=128, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 62224; Mature: 62224
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEQVIELCQPLHLVLDS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGLCRLLWVGPLDGSGQLLAHLPESPRRKTAGWRLISCSLTLQRNNLRPEQHDAIVALDL CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEE APNSWLRFAPTADRGGRRIAALWQPDPKEISGWSLIEANGLSELCQHSQGSTAKPEVNPL CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCC PSKDGRERVLLLTLTGPKQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC KLQETALEVRRHSASLVITDRELSPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGR CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH LQVELAQLRYRMPRLMGRGRSLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEHSKVLAENKLFATLDPTTRRF HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCEE LIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL EEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH DTVHQLLNSLGAESIRQVIANQIDRCDTSALEEIRSIDPKVIYLSAASGAGLQGLKHWLK HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH DQFWGHKAESAPLPSVNT HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKQAHLAGRTKGLRPSQQRQLERLSHRRHPEREGADQLTLERLAEQVIELCQPLHLVLDS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGLCRLLWVGPLDGSGQLLAHLPESPRRKTAGWRLISCSLTLQRNNLRPEQHDAIVALDL CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEE APNSWLRFAPTADRGGRRIAALWQPDPKEISGWSLIEANGLSELCQHSQGSTAKPEVNPL CCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCC PSKDGRERVLLLTLTGPKQSRSERDLAELEGLVRSAGGHPVAVVRQKQGAPNPQTLWGKG CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC KLQETALEVRRHSASLVITDRELSPVQVRNLERYLDCPVMDRSELILDIFAQRASSAAGR CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH LQVELAQLRYRMPRLMGRGRSLSRQGGGIGTRGPGETQLEKDRRAITRRIEHLLREVRQL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNHRARLRNRREGLPRVALVGYTNAGKSSLLNALCSRNEHSKVLAENKLFATLDPTTRRF HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCEE LIPQTGGKPLELLITDTVGFIRELPAPLVEAFRATLEETLEADLLLVVVDLSDTDWQAQL EEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH DTVHQLLNSLGAESIRQVIANQIDRCDTSALEEIRSIDPKVIYLSAASGAGLQGLKHWLK HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH DQFWGHKAESAPLPSVNT HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]