| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is aroK
Identifier: 124021918
GI number: 124021918
Start: 224035
End: 224613
Strand: Reverse
Name: aroK
Synonym: P9303_02051
Alternate gene names: 124021918
Gene position: 224613-224035 (Counterclockwise)
Preceding gene: 124021926
Following gene: 124021917
Centisome position: 8.37
GC content: 50.6
Gene sequence:
>579_bases ATGAACGAAAGCCCAGCCCCTCATCCTCTCAAGCAAAGGCTTGGCGGTCGCAACCTCTATTTGGTGGGAATGATGGCCAG TGGCAAGAGCAGCACAGGCAGGCCTCTAGCCGAACAACTCAGCTATGGGTTTGTGGATACAGATGCCGTCATCGAACAAC TTGCTGGCCAACCAATCCCGAAGATCTTTAACGAAGAAGGAGAAGAAGGATTTCGAGCAATGGAGTCTCAAGTACTCAAT GCCATTGGCCAACGCCATTCCCTTGTTGTTGCTACTGGCGGGGGGATGGTGAGTAAGCCAGAAAACTGGGGGATCTTGCA TCAGGGCATCGTGATCTGGCTAAACCCTGGCCGAGAAGAACTATTCAGACGTTTACATGCTGATAGCGGCAATCGGCCAT TACTACAAACAGAAGATCCAGAAGCAGCCTTCGACTGTTTATTTGCCGAACGCTTACCGCTTTATGCCGAAGCAGACTTG CGTGTGGAAGTGGGAGCAGAGGAACCAGACGGGATTGCGCTAAAGATTATTGAGTTACTGCCCCAGCTGTTATCGCCCCC TGTAAAAATGAATGGTTAA
Upstream 100 bases:
>100_bases ACAGCCGCGGCCATGACCATGGCGTTCCAAATCGGGGACGTCAGTCATCGCTCTCTCGGACTAGAAGTCATCCTAGAGAT CTATAGACATTTACGAACCA
Downstream 100 bases:
>100_bases AGCAACTATTTTGTCAATACTAAAAGAATAGACCATTTAAGTCCGGAGGGTTGGCCTGATAGCCAATCCCAATCAAAACA AACGATCCATCAATGACTTG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFNEEGEEGFRAMESQVLN AIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHADSGNRPLLQTEDPEAAFDCLFAERLPLYAEADL RVEVGAEEPDGIALKIIELLPQLLSPPVKMNG
Sequences:
>Translated_192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFNEEGEEGFRAMESQVLN AIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHADSGNRPLLQTEDPEAAFDCLFAERLPLYAEADL RVEVGAEEPDGIALKIIELLPQLLSPPVKMNG >Mature_192_residues MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFNEEGEEGFRAMESQVLN AIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHADSGNRPLLQTEDPEAAFDCLFAERLPLYAEADL RVEVGAEEPDGIALKIIELLPQLLSPPVKMNG
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=39.5209580838323, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1786587, Length=170, Percent_Identity=30.5882352941176, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_PROM3 (A2C650)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016225.1 - ProteinModelPortal: A2C650 - SMR: A2C650 - STRING: A2C650 - GeneID: 4777357 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_02051 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - ProtClustDB: PRK00131 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20962; Mature: 20962
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 48-48 BINDING 72-72 BINDING 94-94 BINDING 132-132 BINDING 151-151
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIP CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCH KIFNEEGEEGFRAMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREE HHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCHHH LFRRLHADSGNRPLLQTEDPEAAFDCLFAERLPLYAEADLRVEVGAEEPDGIALKIIELL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCCCCCCHHHHHHHHH PQLLSPPVKMNG HHHHCCCCCCCC >Mature Secondary Structure MNESPAPHPLKQRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIP CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCH KIFNEEGEEGFRAMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREE HHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCHHH LFRRLHADSGNRPLLQTEDPEAAFDCLFAERLPLYAEADLRVEVGAEEPDGIALKIIELL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCCCCCCHHHHHHHHH PQLLSPPVKMNG HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA