| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is epsE [H]
Identifier: 124021849
GI number: 124021849
Start: 150458
End: 151279
Strand: Direct
Name: epsE [H]
Synonym: P9303_01361
Alternate gene names: 124021849
Gene position: 150458-151279 (Clockwise)
Preceding gene: 124021848
Following gene: 124021850
Centisome position: 5.61
GC content: 53.41
Gene sequence:
>822_bases TTGCCGCTGATGCTTGCTTCGTCTCTGATCACGCCATCACCTGCTTGCAACATTCTTTTGGATTTGCCTCCTCGATCTGG CCAGAGGCCTTTGGTGGCAGTTGTGGTCAGTCTTTACAACTATGAAGATTGCATTCTTGAGACTCTTGAAACGGTTGCGT TGCAAACTCTCGAAGGCATTCAGTTGGTTGTGGTGGATGACGCATCCACTGATTTGGGTGCTGCAAGGGTGGAAGGGTGG CTTGTGGAACATCAGGATTGCTTCTGCAGTGTTCGATTGCTCCAGCATCAGCACAATGGTGGCTTGGCAGCTGCTCGCAA TACGGGCTTCGCTGCAACGACAACTGAATGGGTATGGGTGCAGGATGCCGATAACCCTTTAGCGCCAAGAGCTCTTGAGC AATCTCATCGTTTAGCTCAGTGTGTGGATGATCAGGTTGCAGTTGTGCACCCCTTGTTGCTCACAGTGCCGCCAATGGCC TCGCCGCAGGTTTTTCAAGGCGAGGGGCGCCCTTGGCAACAGTCGATTTTTGCTGCCTCTAATGCTGTCGATGCGATGGC GTTGATCAGGCGTTCGGCCTGGCAAGAGGTTGGCGGTTATGTCCACATTCCAGGCGGCTGGGAAGACTATGACTTCTGGT GTTCTTTGATTGATGCCGGTTGGAGTGGTGTTCAGTGCCCTCAGCCCCTTGGCTGCTACAGCGTGCATCAAGATTCGATG ACCGCGCTCACGGCTTTACCCAATGTGCGCGGTCTGGAGCATCTGCTTAAGGAACGGCATCCTTGGTTGACTTGTGTTGG TGGCACAACTGGAACCAGATGA
Upstream 100 bases:
>100_bases GGCTTGAGCCAATACAGCAAGGTGCTTGTCAGTTGTCATCTGAAGCCGTTGTGTTGGCTCCAGAAGTAGAGCTGGATTTG CTTCTGCAATGGGAATCTCG
Downstream 100 bases:
>100_bases CCAAGGCCGCTAAATTTGTTGGATCAAGAAAGGTTTTCCTCTGACTAGTGCTGTCAACGATCCCCTGGTTCAACTTGAGC ATGTTTGTCTTGACATTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPLMLASSLITPSPACNILLDLPPRSGQRPLVAVVVSLYNYEDCILETLETVALQTLEGIQLVVVDDASTDLGAARVEGW LVEHQDCFCSVRLLQHQHNGGLAAARNTGFAATTTEWVWVQDADNPLAPRALEQSHRLAQCVDDQVAVVHPLLLTVPPMA SPQVFQGEGRPWQQSIFAASNAVDAMALIRRSAWQEVGGYVHIPGGWEDYDFWCSLIDAGWSGVQCPQPLGCYSVHQDSM TALTALPNVRGLEHLLKERHPWLTCVGGTTGTR
Sequences:
>Translated_273_residues MPLMLASSLITPSPACNILLDLPPRSGQRPLVAVVVSLYNYEDCILETLETVALQTLEGIQLVVVDDASTDLGAARVEGW LVEHQDCFCSVRLLQHQHNGGLAAARNTGFAATTTEWVWVQDADNPLAPRALEQSHRLAQCVDDQVAVVHPLLLTVPPMA SPQVFQGEGRPWQQSIFAASNAVDAMALIRRSAWQEVGGYVHIPGGWEDYDFWCSLIDAGWSGVQCPQPLGCYSVHQDSM TALTALPNVRGLEHLLKERHPWLTCVGGTTGTR >Mature_272_residues PLMLASSLITPSPACNILLDLPPRSGQRPLVAVVVSLYNYEDCILETLETVALQTLEGIQLVVVDDASTDLGAARVEGWL VEHQDCFCSVRLLQHQHNGGLAAARNTGFAATTTEWVWVQDADNPLAPRALEQSHRLAQCVDDQVAVVHPLLLTVPPMAS PQVFQGEGRPWQQSIFAASNAVDAMALIRRSAWQEVGGYVHIPGGWEDYDFWCSLIDAGWSGVQCPQPLGCYSVHQDSMT ALTALPNVRGLEHLLKERHPWLTCVGGTTGTR
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 29769; Mature: 29638
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLMLASSLITPSPACNILLDLPPRSGQRPLVAVVVSLYNYEDCILETLETVALQTLEGI CCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCE QLVVVDDASTDLGAARVEGWLVEHQDCFCSVRLLQHQHNGGLAAARNTGFAATTTEWVWV EEEEEECCCCCCCHHHHHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEE QDADNPLAPRALEQSHRLAQCVDDQVAVVHPLLLTVPPMASPQVFQGEGRPWQQSIFAAS ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHH NAVDAMALIRRSAWQEVGGYVHIPGGWEDYDFWCSLIDAGWSGVQCPQPLGCYSVHQDSM HHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCHH TALTALPNVRGLEHLLKERHPWLTCVGGTTGTR HHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure PLMLASSLITPSPACNILLDLPPRSGQRPLVAVVVSLYNYEDCILETLETVALQTLEGI CCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCE QLVVVDDASTDLGAARVEGWLVEHQDCFCSVRLLQHQHNGGLAAARNTGFAATTTEWVWV EEEEEECCCCCCCHHHHHHEEEECHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEE QDADNPLAPRALEQSHRLAQCVDDQVAVVHPLLLTVPPMASPQVFQGEGRPWQQSIFAAS ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHH NAVDAMALIRRSAWQEVGGYVHIPGGWEDYDFWCSLIDAGWSGVQCPQPLGCYSVHQDSM HHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCHH TALTALPNVRGLEHLLKERHPWLTCVGGTTGTR HHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]