| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021840
Identifier: 124021840
GI number: 124021840
Start: 135399
End: 136556
Strand: Direct
Name: 124021840
Synonym: P9303_01271
Alternate gene names: NA
Gene position: 135399-136556 (Clockwise)
Preceding gene: 124021831
Following gene: 124021841
Centisome position: 5.05
GC content: 40.33
Gene sequence:
>1158_bases TTGATTGGCTTGGGCATAAACCCGCTTTCTGAGGAATTGCCGAATGGAGTTCAATATCAACAGTATATGGTAAATAGGGG CAACACTTTTGGAATTCATGATCATCTATTAGATCTTGATAGTAAGTTGATAAGAGGTGAAGCCTGTGCTCAACATGCAA TTAAACTTAGGGACAAAGGTTTTAACCCAGAACTCATATGTGCTCATGTCGGCTGGGGGGAGGCTCTTTTTCTTAAAGAT ATCTGGCCAAATTCTCCAATGATTGCTTATCAAGAGTTTTTTTATAATGCGACTGGCTTTGATTTGGGATTTGACCCTGA ATTCTCCTCAGCCTCTATCTTGAATGATATCGCACGTGCTCGCTTTAAGACATTAAACCCTTTGTTAATGCTAGAGGTTA GTGATTGGAACATTACACCAACTAGATTTCAAAAATCCACTTATCCATTACAATACCATCCAAGAATATCAGTTATTCAT GATGGTATCGACACCCAATTGGCTCAACCTAACTTGAGAACCAGCCCCTTAAAATTAGATAATGGGCTTACACTTTCAGC GAATCAATCAATTGTCACATTTGTCAACCGTAACCTTGAACCTTATCGGGGATGCCATAGCTTTATTAGGTCGATTCCTT ATATTCAAGATTACTCACCTGGTACAAAAATAGTTGTAGTTGGCTCACCGGATGGCACCGGTTATGGTGCTCAGTCTGGA GACATATCATGGCGAGATACTTTCTTAGCAGAGATAACAGATTGTTATGACCCTGCCCTCGTTCATTTTGTTGGATGCTT GGATTATTTAAAATTTATTCACCTTCTCCAACTAAGCAGTTGTCATGTATATCTTACCTACCCATTTGTACTGAGCTGGA GCTTATTAGAGGCTATGAGCATTGGATGCGCAATTGTTGGCTCCAGTACAGCACCAGTTCAAGAATTAATCGTATCAGGT CATAACGGACTATTGGTGGATTTCTTTTCACCCAAGGATATCTCTAGGGCAGTTGCCACCATACTACAGGAACCTGACTT AGCTTTTAAGTTAGGAAAAAACGCACGCGAATCAATTCTTGCAAAATATAGCATCGAAAAATGCTTACCATTGCACCTCT CTTTGATGCAACTGGTTGCATCAGGTGGCCTCACATAG
Upstream 100 bases:
>100_bases TGCTTGATAGCTATTAATGCATATTCTGTTTGTTCACCAAAACTTCCCTGGTCAGTATCGTCATATCTTACGGGCATTAT CTTCTCAAGGTGGCCATACT
Downstream 100 bases:
>100_bases AATTTTTAGTGAAATGATTAATCACATGCTGTCACTACATCAAATTATAGCTCCTAAATATAATGAACCCACCGAAATAA TATTTCTCTCCCGCATATGA
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIGLGINPLSEELPNGVQYQQYMVNRGNTFGIHDHLLDLDSKLIRGEACAQHAIKLRDKGFNPELICAHVGWGEALFLKD IWPNSPMIAYQEFFYNATGFDLGFDPEFSSASILNDIARARFKTLNPLLMLEVSDWNITPTRFQKSTYPLQYHPRISVIH DGIDTQLAQPNLRTSPLKLDNGLTLSANQSIVTFVNRNLEPYRGCHSFIRSIPYIQDYSPGTKIVVVGSPDGTGYGAQSG DISWRDTFLAEITDCYDPALVHFVGCLDYLKFIHLLQLSSCHVYLTYPFVLSWSLLEAMSIGCAIVGSSTAPVQELIVSG HNGLLVDFFSPKDISRAVATILQEPDLAFKLGKNARESILAKYSIEKCLPLHLSLMQLVASGGLT
Sequences:
>Translated_385_residues MIGLGINPLSEELPNGVQYQQYMVNRGNTFGIHDHLLDLDSKLIRGEACAQHAIKLRDKGFNPELICAHVGWGEALFLKD IWPNSPMIAYQEFFYNATGFDLGFDPEFSSASILNDIARARFKTLNPLLMLEVSDWNITPTRFQKSTYPLQYHPRISVIH DGIDTQLAQPNLRTSPLKLDNGLTLSANQSIVTFVNRNLEPYRGCHSFIRSIPYIQDYSPGTKIVVVGSPDGTGYGAQSG DISWRDTFLAEITDCYDPALVHFVGCLDYLKFIHLLQLSSCHVYLTYPFVLSWSLLEAMSIGCAIVGSSTAPVQELIVSG HNGLLVDFFSPKDISRAVATILQEPDLAFKLGKNARESILAKYSIEKCLPLHLSLMQLVASGGLT >Mature_385_residues MIGLGINPLSEELPNGVQYQQYMVNRGNTFGIHDHLLDLDSKLIRGEACAQHAIKLRDKGFNPELICAHVGWGEALFLKD IWPNSPMIAYQEFFYNATGFDLGFDPEFSSASILNDIARARFKTLNPLLMLEVSDWNITPTRFQKSTYPLQYHPRISVIH DGIDTQLAQPNLRTSPLKLDNGLTLSANQSIVTFVNRNLEPYRGCHSFIRSIPYIQDYSPGTKIVVVGSPDGTGYGAQSG DISWRDTFLAEITDCYDPALVHFVGCLDYLKFIHLLQLSSCHVYLTYPFVLSWSLLEAMSIGCAIVGSSTAPVQELIVSG HNGLLVDFFSPKDISRAVATILQEPDLAFKLGKNARESILAKYSIEKCLPLHLSLMQLVASGGLT
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42746; Mature: 42746
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLGINPLSEELPNGVQYQQYMVNRGNTFGIHDHLLDLDSKLIRGEACAQHAIKLRDKG CCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNPELICAHVGWGEALFLKDIWPNSPMIAYQEFFYNATGFDLGFDPEFSSASILNDIARA CCCCEEEEECCCCCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH RFKTLNPLLMLEVSDWNITPTRFQKSTYPLQYHPRISVIHDGIDTQLAQPNLRTSPLKLD HHHHCCCEEEEEECCCCCCHHHHCCCCCCEEECCEEEEEECCCCHHCCCCCCCCCCEEEC NGLTLSANQSIVTFVNRNLEPYRGCHSFIRSIPYIQDYSPGTKIVVVGSPDGTGYGAQSG CCEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCC DISWRDTFLAEITDCYDPALVHFVGCLDYLKFIHLLQLSSCHVYLTYPFVLSWSLLEAMS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH IGCAIVGSSTAPVQELIVSGHNGLLVDFFSPKDISRAVATILQEPDLAFKLGKNARESIL CCEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHHEECCCCHHHHHH AKYSIEKCLPLHLSLMQLVASGGLT HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIGLGINPLSEELPNGVQYQQYMVNRGNTFGIHDHLLDLDSKLIRGEACAQHAIKLRDKG CCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNPELICAHVGWGEALFLKDIWPNSPMIAYQEFFYNATGFDLGFDPEFSSASILNDIARA CCCCEEEEECCCCCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH RFKTLNPLLMLEVSDWNITPTRFQKSTYPLQYHPRISVIHDGIDTQLAQPNLRTSPLKLD HHHHCCCEEEEEECCCCCCHHHHCCCCCCEEECCEEEEEECCCCHHCCCCCCCCCCEEEC NGLTLSANQSIVTFVNRNLEPYRGCHSFIRSIPYIQDYSPGTKIVVVGSPDGTGYGAQSG CCEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCC DISWRDTFLAEITDCYDPALVHFVGCLDYLKFIHLLQLSSCHVYLTYPFVLSWSLLEAMS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH IGCAIVGSSTAPVQELIVSGHNGLLVDFFSPKDISRAVATILQEPDLAFKLGKNARESIL CCEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHHEECCCCHHHHHH AKYSIEKCLPLHLSLMQLVASGGLT HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA