| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021837
Identifier: 124021837
GI number: 124021837
Start: 129051
End: 131066
Strand: Reverse
Name: 124021837
Synonym: P9303_01241
Alternate gene names: NA
Gene position: 131066-129051 (Counterclockwise)
Preceding gene: 124021838
Following gene: 124021836
Centisome position: 4.89
GC content: 37.15
Gene sequence:
>2016_bases TTGCCCCATTTTTTTATGGACAATGGATTGTTTGCAAAAAACCTGGAATTCATCAATAAAATGAATCCAGGTTTTATCGA GAACAAGAAAGTAGATATTGAAAAGGCAAAGCAAAAGAATGTTTCATCAGATTGGCAGAATGAATACGCCTATTGGAGTG CAATGGAGCCTAAAGCGCTATTTCTTCCAAACCTTTTATTTAGGAATGAAGGAGTAACGGAATGGGCAAAGAGTGAAATA GAGAAGGTAGACATCGAAGGAGATATAAAAACATTGATAAATGTCTCTAGAGACATTACATTTTATAATTTATGCCTGAA GCTTAGGAAAAATTTAGAAGAAATAGGAGTTAATCCGAATAATACCGAAACTGTAATGGGTACTGGGGGTACGTCAATCA TTGCTTTAGGAACAGGTAGTGGTGTTCTGCTCAATAAAATGATAAGAGCATTTAATCCATATATAGTCCATATTATTCTG TCGACGTGGGATGACTATGTATCGAGTTTCTACACGCTTGACTGGGAGGACCTGAGAGCATACCTAGACATGCAAGGAGC TGAATTGCACGTATCATGCATTAAACATGAAACTGATTTGCTGCAAACACTAAGGGGAAAAGGGTTATACTATCTCGACC ATGCGTACTTATATTGTTCACCCCAAACTGATGAGAAATTAAAAGAATATTCTAAAATCCTATATGGACAAAGATTTACC AATCTAGTTAATTACCTTGGCTATACCATAGATGAATACAATATGATCATACAAGCGTCGGACACATTGCGATGCTGTCC AAAAATGTTTGCTGATCCGATTGATGGATTAGGTGGTAAATTTTTGGTCTGTGGTAGTGGGCCGTCGTTAGATCAATCAA TAGAGATTATAAGAGAATTACAATCAACTCATATAATTGTGTGCGGTGGGAGTAGTTACAAGGCACTAGTAGAAGAAGGT ATTCGAGTAGATTTCCTAACATTGATGGAGAGAGATTATGATACTGGCAATGATGATTATGCAGGTTTTCATGAAAAGAT GGGTGGCACACCAGAGTGTGTACATTTAGTTATGGCCTCTGTATGTCATTTCAAAATGCTAGAGACCTTTCCTAAATCAT CTGTTTTTTTTAGGGGTGCATTAACTCCACTAGCATTATTCTCGACCTCTAGTAGACAAGCTATTTATTATGAAGGGCCT GAGGCTGTTAACACGGCATTCTCTTTGTGTGCACAGCTTGGTGCCGATGAGATAGTTCTGTTTGGAGTTGATCTAGGTAG CGTGTCGAAGGATGAACCAAGGAGTGGAAAAGTATTAGGAAACAGTCAGCGAGTCTTTAACATGGATGCTATTGGGAATC TAAGAGAAGAAATCTACACGTGCACAAGTATGATTAGTGTACTTCAGGTCATAGAAGCAAAAATAGTAGAGTGTCAGAAT AGAGCAAAGATCGAAGATATATATGTTGCACCAAGATTTGTAAATTGTAGCGATGGAATGCGGATTAAAGGAACCGAAGC CAGCCAGGGTGAAGAATATCTAAGAAAGATAAAGCAAGAGAGAAATGGTGTAGAAGAAAACAAGAAACAGCTTAAATTGG AAGATATTAATCCAGAGATAGAACTATGGTGGGATAGCCTTCATTCATATACTAAGGATGTATTTTGGGCTGAATGGAAA AGGAAAAATCCAAGAAAATATACACTAGAGTTATGTGAAAAAATGCGAAATATATTTTCTAATGAAATTCCCTGGTTCCC AGATATGTTGAAAGAATTTGAAAAGTTATATGATACACCTAGATCACAATATGAAGATATCCCAAGGAGAATAATGCGTG GGACAATGCTTAAGGGTGTACTGGCTGTAACTCAACAATTACAAATCATGAGAATGGAAGCACCAGAAAAGCTAGAGGAG TATGTAAAAGACTCAAAAAATATTCTGATAAGTACAGTGGGGGAGATTGAAGAGCAAATGTATAAGGTATGTGACTATAT AGAAAGCCAGGAGTAA
Upstream 100 bases:
>100_bases GGTAGGTACAGTTGATGGTCAGCTCGGGATTACATTCACCTAAGTAGTATCGGGACATCCAAATATAAACCAATTAGTTA ATCAATCGGGGCAATTTAAA
Downstream 100 bases:
>100_bases ACCTACTATGAATAATCAACAGCTATATAAAAAGAATTGCCTGTGGTTAAAAGCAACAATTGGAGAAAATGAAAGTAGCA GAATTCTAAAGGCCGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MPHFFMDNGLFAKNLEFINKMNPGFIENKKVDIEKAKQKNVSSDWQNEYAYWSAMEPKALFLPNLLFRNEGVTEWAKSEI EKVDIEGDIKTLINVSRDITFYNLCLKLRKNLEEIGVNPNNTETVMGTGGTSIIALGTGSGVLLNKMIRAFNPYIVHIIL STWDDYVSSFYTLDWEDLRAYLDMQGAELHVSCIKHETDLLQTLRGKGLYYLDHAYLYCSPQTDEKLKEYSKILYGQRFT NLVNYLGYTIDEYNMIIQASDTLRCCPKMFADPIDGLGGKFLVCGSGPSLDQSIEIIRELQSTHIIVCGGSSYKALVEEG IRVDFLTLMERDYDTGNDDYAGFHEKMGGTPECVHLVMASVCHFKMLETFPKSSVFFRGALTPLALFSTSSRQAIYYEGP EAVNTAFSLCAQLGADEIVLFGVDLGSVSKDEPRSGKVLGNSQRVFNMDAIGNLREEIYTCTSMISVLQVIEAKIVECQN RAKIEDIYVAPRFVNCSDGMRIKGTEASQGEEYLRKIKQERNGVEENKKQLKLEDINPEIELWWDSLHSYTKDVFWAEWK RKNPRKYTLELCEKMRNIFSNEIPWFPDMLKEFEKLYDTPRSQYEDIPRRIMRGTMLKGVLAVTQQLQIMRMEAPEKLEE YVKDSKNILISTVGEIEEQMYKVCDYIESQE
Sequences:
>Translated_671_residues MPHFFMDNGLFAKNLEFINKMNPGFIENKKVDIEKAKQKNVSSDWQNEYAYWSAMEPKALFLPNLLFRNEGVTEWAKSEI EKVDIEGDIKTLINVSRDITFYNLCLKLRKNLEEIGVNPNNTETVMGTGGTSIIALGTGSGVLLNKMIRAFNPYIVHIIL STWDDYVSSFYTLDWEDLRAYLDMQGAELHVSCIKHETDLLQTLRGKGLYYLDHAYLYCSPQTDEKLKEYSKILYGQRFT NLVNYLGYTIDEYNMIIQASDTLRCCPKMFADPIDGLGGKFLVCGSGPSLDQSIEIIRELQSTHIIVCGGSSYKALVEEG IRVDFLTLMERDYDTGNDDYAGFHEKMGGTPECVHLVMASVCHFKMLETFPKSSVFFRGALTPLALFSTSSRQAIYYEGP EAVNTAFSLCAQLGADEIVLFGVDLGSVSKDEPRSGKVLGNSQRVFNMDAIGNLREEIYTCTSMISVLQVIEAKIVECQN RAKIEDIYVAPRFVNCSDGMRIKGTEASQGEEYLRKIKQERNGVEENKKQLKLEDINPEIELWWDSLHSYTKDVFWAEWK RKNPRKYTLELCEKMRNIFSNEIPWFPDMLKEFEKLYDTPRSQYEDIPRRIMRGTMLKGVLAVTQQLQIMRMEAPEKLEE YVKDSKNILISTVGEIEEQMYKVCDYIESQE >Mature_670_residues PHFFMDNGLFAKNLEFINKMNPGFIENKKVDIEKAKQKNVSSDWQNEYAYWSAMEPKALFLPNLLFRNEGVTEWAKSEIE KVDIEGDIKTLINVSRDITFYNLCLKLRKNLEEIGVNPNNTETVMGTGGTSIIALGTGSGVLLNKMIRAFNPYIVHIILS TWDDYVSSFYTLDWEDLRAYLDMQGAELHVSCIKHETDLLQTLRGKGLYYLDHAYLYCSPQTDEKLKEYSKILYGQRFTN LVNYLGYTIDEYNMIIQASDTLRCCPKMFADPIDGLGGKFLVCGSGPSLDQSIEIIRELQSTHIIVCGGSSYKALVEEGI RVDFLTLMERDYDTGNDDYAGFHEKMGGTPECVHLVMASVCHFKMLETFPKSSVFFRGALTPLALFSTSSRQAIYYEGPE AVNTAFSLCAQLGADEIVLFGVDLGSVSKDEPRSGKVLGNSQRVFNMDAIGNLREEIYTCTSMISVLQVIEAKIVECQNR AKIEDIYVAPRFVNCSDGMRIKGTEASQGEEYLRKIKQERNGVEENKKQLKLEDINPEIELWWDSLHSYTKDVFWAEWKR KNPRKYTLELCEKMRNIFSNEIPWFPDMLKEFEKLYDTPRSQYEDIPRRIMRGTMLKGVLAVTQQLQIMRMEAPEKLEEY VKDSKNILISTVGEIEEQMYKVCDYIESQE
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76951; Mature: 76820
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFFMDNGLFAKNLEFINKMNPGFIENKKVDIEKAKQKNVSSDWQNEYAYWSAMEPKAL CCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHCCCEEEECCCCCHH FLPNLLFRNEGVTEWAKSEIEKVDIEGDIKTLINVSRDITFYNLCLKLRKNLEEIGVNPN HHCHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC NTETVMGTGGTSIIALGTGSGVLLNKMIRAFNPYIVHIILSTWDDYVSSFYTLDWEDLRA CCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHEECCHHHHHH YLDMQGAELHVSCIKHETDLLQTLRGKGLYYLDHAYLYCSPQTDEKLKEYSKILYGQRFT HHCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHH NLVNYLGYTIDEYNMIIQASDTLRCCPKMFADPIDGLGGKFLVCGSGPSLDQSIEIIREL HHHHHHCCCEECCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHH QSTHIIVCGGSSYKALVEEGIRVDFLTLMERDYDTGNDDYAGFHEKMGGTPECVHLVMAS HHCEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHH VCHFKMLETFPKSSVFFRGALTPLALFSTSSRQAIYYEGPEAVNTAFSLCAQLGADEIVL HHHHHHHHHCCCCCEEEHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEE FGVDLGSVSKDEPRSGKVLGNSQRVFNMDAIGNLREEIYTCTSMISVLQVIEAKIVECQN EECCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RAKIEDIYVAPRFVNCSDGMRIKGTEASQGEEYLRKIKQERNGVEENKKQLKLEDINPEI CCCCEEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHCEEEECCCCCH ELWWDSLHSYTKDVFWAEWKRKNPRKYTLELCEKMRNIFSNEIPWFPDMLKEFEKLYDTP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC RSQYEDIPRRIMRGTMLKGVLAVTQQLQIMRMEAPEKLEEYVKDSKNILISTVGEIEEQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHH YKVCDYIESQE HHHHHHHCCCC >Mature Secondary Structure PHFFMDNGLFAKNLEFINKMNPGFIENKKVDIEKAKQKNVSSDWQNEYAYWSAMEPKAL CCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHCCCEEEECCCCCHH FLPNLLFRNEGVTEWAKSEIEKVDIEGDIKTLINVSRDITFYNLCLKLRKNLEEIGVNPN HHCHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC NTETVMGTGGTSIIALGTGSGVLLNKMIRAFNPYIVHIILSTWDDYVSSFYTLDWEDLRA CCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHEECCHHHHHH YLDMQGAELHVSCIKHETDLLQTLRGKGLYYLDHAYLYCSPQTDEKLKEYSKILYGQRFT HHCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHH NLVNYLGYTIDEYNMIIQASDTLRCCPKMFADPIDGLGGKFLVCGSGPSLDQSIEIIREL HHHHHHCCCEECCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHH QSTHIIVCGGSSYKALVEEGIRVDFLTLMERDYDTGNDDYAGFHEKMGGTPECVHLVMAS HHCEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHH VCHFKMLETFPKSSVFFRGALTPLALFSTSSRQAIYYEGPEAVNTAFSLCAQLGADEIVL HHHHHHHHHCCCCCEEEHHCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEE FGVDLGSVSKDEPRSGKVLGNSQRVFNMDAIGNLREEIYTCTSMISVLQVIEAKIVECQN EECCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RAKIEDIYVAPRFVNCSDGMRIKGTEASQGEEYLRKIKQERNGVEENKKQLKLEDINPEI CCCCEEEEECCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHCEEEECCCCCH ELWWDSLHSYTKDVFWAEWKRKNPRKYTLELCEKMRNIFSNEIPWFPDMLKEFEKLYDTP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC RSQYEDIPRRIMRGTMLKGVLAVTQQLQIMRMEAPEKLEEYVKDSKNILISTVGEIEEQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHH YKVCDYIESQE HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA