| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021836
Identifier: 124021836
GI number: 124021836
Start: 127022
End: 129043
Strand: Reverse
Name: 124021836
Synonym: P9303_01231
Alternate gene names: NA
Gene position: 129043-127022 (Counterclockwise)
Preceding gene: 124021837
Following gene: 124021835
Centisome position: 4.81
GC content: 33.33
Gene sequence:
>2022_bases ATGAATAATCAACAGCTATATAAAAAGAATTGCCTGTGGTTAAAAGCAACAATTGGAGAAAATGAAAGTAGCAGAATTCT AAAGGCCGAAGCGGAAGTAAGGGTAAATAACGAAATGATAAATATCAATGGTAAAAGGGTTTACGAAGATGTTAGGAGCG AGATAATACTGCCAGTCATGCTACAAATATTAAAACCACGTAATATAAGACATGCTAAATATTCATCTGATGATCAGTCC AAAAATGTGAATGATATTGCTAAATCAGTAATAAGTTCCGTAGACGAAGAGGTTCTGAAAACATTACCATTAGCAGATAA GGCTTTTGTATCAAAAGAGAATAAGAGTAATCAAAATTACGTTTGTCTAGGATCTATGACATTATTAGCCTTTGAAGAGC TAAGTAAAGAAGAAGGTTCGAAAAATTTAATAAATTCAGGGGGGCTGAAAATGAAAAACATTAATTCAATTACACTCATA GAATCAGATACTGAAAATTTACATTTATTATTAAATATGATAGACATCGAAGAATTTGTTTCTATGTGCAAAATAAAGAG GATTGGTTTTCATCTAATAGTAGAAGAAGATAAAGATAGATTAATAGAAAAAATTTTTAACTATTTTACAGAGGTAATGC CATGTCAACTTTTTCGATTAAGCATGGTTAAAGAGGAGAGGTTGAATTCAATATTGATAGCCGTTGATTCCTGGTTATTC AGTGAAAGTGGGATAGGATATCGCAGTTATGCATCACTTGGTTTTACTACGGATGAAATTAATCAAATCGTCAATGGGTC AATTAATTATGGTCGTAAAGGAAGATTTAAACATTTGATAAAAGGAAGCCTAGTTGATAATTTGGCCTCGCAGGCAATAG TTGTGGCCAGTGGACCGAGCCTAGATAGGCATATAGAATGGCTAGAAAAGAATTGCAGAAAATTTACAATATTTGCATCT TCCAGCTCTGTCAAGACATTATTAAGAAATAATATAGCTTGTGATTTTCTAGTAATAAATGAAAGAAATGTGATTGTGTA TGATCTGTTAAAGGAGTTGAAATGCGAGTATTCAAAGTTATCAGAAATAACATTGATATGTTCAGATACTGTTGATCCGC GTATTCCATCTTTATTTAAACAAGTTGTATTCTTCCAACGTCCAAGGTCAAGCATATGCGCACTTTACTCAGAATATTCA GACAGTATGTTGGGATCCTCAGGGCCTGAAGCAGTAAATTGCTCTATAGAAACAGCCTATCTATTAGGCTTTAAAAATAT TTTCATGCTCGGTTGTGATTTTGGTGCAAGGAAACGGGCTTATCCGCGCTCTGAGGATGCAATGGGACCATCACCGCGTG CTCTTAATTTACCAGTGATGGGTAATTTAGGACGAACAGTCTTTTCACAGCCAAGTCTATTAATGGTAAGGGACTCAATA GAATGGTTTGCTGGAGTATATTCTGATTTAAAACTCATACGATGTGGCGAAGGTGTGGAGCTAACTAATAGCAAGACAAT AGATATACTTGATGAGTCTGTATCAAAAAGATTCGTAAAGGATAAAATTAAAATTTCAAATGAGAGATTGCTACGTAATT GTATAGAAAGAAACAATCCGCAATCGGCAAAAGAAAAGATTCCTCAATACAAGAGGTCACTGAATAAATATTGTAAAGAT ATCATGGCAACTATAGAGGAAGAAAGTGATTGGAATATAGAATTCGAAAGGAAATTGAAAGGTTATTTATATTGGAGCCT GAATAGTGAAACAGAACCATTCTATGATGTAGCATCTAGAAGGACTATGAGGTTCTGTGTATTTCATTTGCTACATACCT TATATGATAATGCTGATAGTATTGAAGAATTTAAAATAGCTAAAAAAGAATTTGGAAAATCAATAAAGCAAATAGAAGAA ATCATTTTGATTATATTAAAAGCTGTAGAGAAGTATGCGGAACACTCTGATAAAGGAATGGAGGATTGGTCTCCAGAAGT GATCAAAAAATTTATAGTTTGA
Upstream 100 bases:
>100_bases GTAAAAGACTCAAAAAATATTCTGATAAGTACAGTGGGGGAGATTGAAGAGCAAATGTATAAGGTATGTGACTATATAGA AAGCCAGGAGTAAACCTACT
Downstream 100 bases:
>100_bases TGTTAAATAAAAAATTTAGCAAAAAATTGCTAATAAAAACAGATCATCAATTGATGACGTTTTACAAATATATTGAGAAG TTATTTCTCAATATATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MNNQQLYKKNCLWLKATIGENESSRILKAEAEVRVNNEMININGKRVYEDVRSEIILPVMLQILKPRNIRHAKYSSDDQS KNVNDIAKSVISSVDEEVLKTLPLADKAFVSKENKSNQNYVCLGSMTLLAFEELSKEEGSKNLINSGGLKMKNINSITLI ESDTENLHLLLNMIDIEEFVSMCKIKRIGFHLIVEEDKDRLIEKIFNYFTEVMPCQLFRLSMVKEERLNSILIAVDSWLF SESGIGYRSYASLGFTTDEINQIVNGSINYGRKGRFKHLIKGSLVDNLASQAIVVASGPSLDRHIEWLEKNCRKFTIFAS SSSVKTLLRNNIACDFLVINERNVIVYDLLKELKCEYSKLSEITLICSDTVDPRIPSLFKQVVFFQRPRSSICALYSEYS DSMLGSSGPEAVNCSIETAYLLGFKNIFMLGCDFGARKRAYPRSEDAMGPSPRALNLPVMGNLGRTVFSQPSLLMVRDSI EWFAGVYSDLKLIRCGEGVELTNSKTIDILDESVSKRFVKDKIKISNERLLRNCIERNNPQSAKEKIPQYKRSLNKYCKD IMATIEEESDWNIEFERKLKGYLYWSLNSETEPFYDVASRRTMRFCVFHLLHTLYDNADSIEEFKIAKKEFGKSIKQIEE IILIILKAVEKYAEHSDKGMEDWSPEVIKKFIV
Sequences:
>Translated_673_residues MNNQQLYKKNCLWLKATIGENESSRILKAEAEVRVNNEMININGKRVYEDVRSEIILPVMLQILKPRNIRHAKYSSDDQS KNVNDIAKSVISSVDEEVLKTLPLADKAFVSKENKSNQNYVCLGSMTLLAFEELSKEEGSKNLINSGGLKMKNINSITLI ESDTENLHLLLNMIDIEEFVSMCKIKRIGFHLIVEEDKDRLIEKIFNYFTEVMPCQLFRLSMVKEERLNSILIAVDSWLF SESGIGYRSYASLGFTTDEINQIVNGSINYGRKGRFKHLIKGSLVDNLASQAIVVASGPSLDRHIEWLEKNCRKFTIFAS SSSVKTLLRNNIACDFLVINERNVIVYDLLKELKCEYSKLSEITLICSDTVDPRIPSLFKQVVFFQRPRSSICALYSEYS DSMLGSSGPEAVNCSIETAYLLGFKNIFMLGCDFGARKRAYPRSEDAMGPSPRALNLPVMGNLGRTVFSQPSLLMVRDSI EWFAGVYSDLKLIRCGEGVELTNSKTIDILDESVSKRFVKDKIKISNERLLRNCIERNNPQSAKEKIPQYKRSLNKYCKD IMATIEEESDWNIEFERKLKGYLYWSLNSETEPFYDVASRRTMRFCVFHLLHTLYDNADSIEEFKIAKKEFGKSIKQIEE IILIILKAVEKYAEHSDKGMEDWSPEVIKKFIV >Mature_673_residues MNNQQLYKKNCLWLKATIGENESSRILKAEAEVRVNNEMININGKRVYEDVRSEIILPVMLQILKPRNIRHAKYSSDDQS KNVNDIAKSVISSVDEEVLKTLPLADKAFVSKENKSNQNYVCLGSMTLLAFEELSKEEGSKNLINSGGLKMKNINSITLI ESDTENLHLLLNMIDIEEFVSMCKIKRIGFHLIVEEDKDRLIEKIFNYFTEVMPCQLFRLSMVKEERLNSILIAVDSWLF SESGIGYRSYASLGFTTDEINQIVNGSINYGRKGRFKHLIKGSLVDNLASQAIVVASGPSLDRHIEWLEKNCRKFTIFAS SSSVKTLLRNNIACDFLVINERNVIVYDLLKELKCEYSKLSEITLICSDTVDPRIPSLFKQVVFFQRPRSSICALYSEYS DSMLGSSGPEAVNCSIETAYLLGFKNIFMLGCDFGARKRAYPRSEDAMGPSPRALNLPVMGNLGRTVFSQPSLLMVRDSI EWFAGVYSDLKLIRCGEGVELTNSKTIDILDESVSKRFVKDKIKISNERLLRNCIERNNPQSAKEKIPQYKRSLNKYCKD IMATIEEESDWNIEFERKLKGYLYWSLNSETEPFYDVASRRTMRFCVFHLLHTLYDNADSIEEFKIAKKEFGKSIKQIEE IILIILKAVEKYAEHSDKGMEDWSPEVIKKFIV
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77081; Mature: 77081
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQQLYKKNCLWLKATIGENESSRILKAEAEVRVNNEMININGKRVYEDVRSEIILPVM CCCCHHHHCCCEEEEEECCCCCCCCEEEEECEEEECCEEEECCCHHHHHHHHHHHHHHHH LQILKPRNIRHAKYSSDDQSKNVNDIAKSVISSVDEEVLKTLPLADKAFVSKENKSNQNY HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCE VCLGSMTLLAFEELSKEEGSKNLINSGGLKMKNINSITLIESDTENLHLLLNMIDIEEFV EEECCHHHHHHHHHHHHCCCCHHHCCCCEEEECCCEEEEEECCCCCEEHHHHHHHHHHHH SMCKIKRIGFHLIVEEDKDRLIEKIFNYFTEVMPCQLFRLSMVKEERLNSILIAVDSWLF HHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHH SESGIGYRSYASLGFTTDEINQIVNGSINYGRKGRFKHLIKGSLVDNLASQAIVVASGPS CCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCC LDRHIEWLEKNCRKFTIFASSSSVKTLLRNNIACDFLVINERNVIVYDLLKELKCEYSKL HHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHHH SEITLICSDTVDPRIPSLFKQVVFFQRPRSSICALYSEYSDSMLGSSGPEAVNCSIETAY CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECEEEHHH LLGFKNIFMLGCDFGARKRAYPRSEDAMGPSPRALNLPVMGNLGRTVFSQPSLLMVRDSI HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCEEEEHHHH EWFAGVYSDLKLIRCGEGVELTNSKTIDILDESVSKRFVKDKIKISNERLLRNCIERNNP HHHHHHHHCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC QSAKEKIPQYKRSLNKYCKDIMATIEEESDWNIEFERKLKGYLYWSLNSETEPFYDVASR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCHHHHHHHH RTMRFCVFHLLHTLYDNADSIEEFKIAKKEFGKSIKQIEEIILIILKAVEKYAEHSDKGM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDWSPEVIKKFIV CCCCHHHHHHHCC >Mature Secondary Structure MNNQQLYKKNCLWLKATIGENESSRILKAEAEVRVNNEMININGKRVYEDVRSEIILPVM CCCCHHHHCCCEEEEEECCCCCCCCEEEEECEEEECCEEEECCCHHHHHHHHHHHHHHHH LQILKPRNIRHAKYSSDDQSKNVNDIAKSVISSVDEEVLKTLPLADKAFVSKENKSNQNY HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCE VCLGSMTLLAFEELSKEEGSKNLINSGGLKMKNINSITLIESDTENLHLLLNMIDIEEFV EEECCHHHHHHHHHHHHCCCCHHHCCCCEEEECCCEEEEEECCCCCEEHHHHHHHHHHHH SMCKIKRIGFHLIVEEDKDRLIEKIFNYFTEVMPCQLFRLSMVKEERLNSILIAVDSWLF HHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHH SESGIGYRSYASLGFTTDEINQIVNGSINYGRKGRFKHLIKGSLVDNLASQAIVVASGPS CCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCC LDRHIEWLEKNCRKFTIFASSSSVKTLLRNNIACDFLVINERNVIVYDLLKELKCEYSKL HHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHHH SEITLICSDTVDPRIPSLFKQVVFFQRPRSSICALYSEYSDSMLGSSGPEAVNCSIETAY CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECEEEHHH LLGFKNIFMLGCDFGARKRAYPRSEDAMGPSPRALNLPVMGNLGRTVFSQPSLLMVRDSI HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCCEEEEHHHH EWFAGVYSDLKLIRCGEGVELTNSKTIDILDESVSKRFVKDKIKISNERLLRNCIERNNP HHHHHHHHCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC QSAKEKIPQYKRSLNKYCKDIMATIEEESDWNIEFERKLKGYLYWSLNSETEPFYDVASR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCHHHHHHHH RTMRFCVFHLLHTLYDNADSIEEFKIAKKEFGKSIKQIEEIILIILKAVEKYAEHSDKGM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDWSPEVIKKFIV CCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA