| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021815
Identifier: 124021815
GI number: 124021815
Start: 101915
End: 103036
Strand: Direct
Name: 124021815
Synonym: P9303_01021
Alternate gene names: NA
Gene position: 101915-103036 (Clockwise)
Preceding gene: 124021814
Following gene: 124021816
Centisome position: 3.8
GC content: 34.76
Gene sequence:
>1122_bases ATGACTGATAAGTATTTGATAGATAGTCATAAATATGTATTTCATCCTGAGCATTCAGCTAAACATTTACAATATATACG CAATCCAGCTGATCACAATTCTTCAGAAGCCTATAAGCAACAACATCCAATTTACATTGAAGTTTCTCCTGTAGGGGCAT GTAATCATCGCTGCACATTCTGTGCCGTAGATTATATTGGCTATAAGTCTATATTTATGGACCTAGAAAGATATAAGTCT TCGATTGACTCTATGATTGGGAAAGAATGTAAAAGCATAATGTTTGCTGGAGAAGGAGAGCCGTTGCTCCATCAAAATAT TAGTGATTTTGTTAATTATACCAAGGAGGTTGGGGCAATTGATACATCTTTTACTACCAATGCTTTTAAGCTTAGTACTG ACTTTGTGCATCGATCACTTCACAATGTGAGCTGGATTAAAGTATCGTTTAATGGGGGAAATAGCAAAACATACTCAGCG ATTCACCGTACAAATGAGAAAGATTTTGATGTTGTAGTAAATAACTTGGCCTATGCTGTTAAGTATCGAAACTCGAACAA ACTTAGCACAGCATTTGGCTTTCAGATGCTGCTTTTGCCTGATAATGTTGACTCAGTACATCAACTTTGCAAATTAGCCA AAGAAATAGGGTTAGATTATGTTGTTATTAAGCCTTATTCCCAACACAAGTTCTCTAATACTCAACAATATGAAAATATT GATTATTCAGAATATCTAGGATTGGAGAAAGAGCTAACTCAGTATAATGATGAGAACTTTAATGTGATTTTCAGAGTTAA TACCATTAAGAATTGGATTAATCAGAATACAAACCGCTATTGTCATTGTTATGCTACACCATCCACTTGGGCATATTGGA TGGCTGACGGAGCTGTTTATAGCTGCAGCGCATATTTATTAGATAAAAGGTTCGAATTGGGTAATATTAATGACCGTAAA TTTGACGAAATATGGTGCTCTGATGCTCGAATGAAGCACGCTGATTATGTTATGAATGATCTGGACATAAAGGAATGCAG AGTTAATTGCAGGATGGATCAAGTTAATAGATACCTTGATTCAATAGTAAATAATAAGATCGACCATATCAACTTTATTT AA
Upstream 100 bases:
>100_bases CAGAGGCACCAGTGTGGACACCAGAATCGATATCTCGAGCAACAGATTCTTGGTTTAAGCACTTGTCGTGATATAATAGA ACTTTACTAATTGATCAAGC
Downstream 100 bases:
>100_bases ACATGCAAGATAAATATCCAGATCAATACATGTATTTATACAAGGATGCTGTTAAGATGCGTGCATTTCAATTGGCAATA GCAGATGAATACCATAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Pyruvate Formate-Lyase Activating; Radical SAM Family Protein; Molybdenum Cofactor Biosynthesis Protein A; Oxidoreductase; Radical Sam Domain Protein; Fe-S Oxidoreductase Containing Radical SAM Domain; Molybdopterin Cofactor Synthesis Protein A
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTDKYLIDSHKYVFHPEHSAKHLQYIRNPADHNSSEAYKQQHPIYIEVSPVGACNHRCTFCAVDYIGYKSIFMDLERYKS SIDSMIGKECKSIMFAGEGEPLLHQNISDFVNYTKEVGAIDTSFTTNAFKLSTDFVHRSLHNVSWIKVSFNGGNSKTYSA IHRTNEKDFDVVVNNLAYAVKYRNSNKLSTAFGFQMLLLPDNVDSVHQLCKLAKEIGLDYVVIKPYSQHKFSNTQQYENI DYSEYLGLEKELTQYNDENFNVIFRVNTIKNWINQNTNRYCHCYATPSTWAYWMADGAVYSCSAYLLDKRFELGNINDRK FDEIWCSDARMKHADYVMNDLDIKECRVNCRMDQVNRYLDSIVNNKIDHINFI
Sequences:
>Translated_373_residues MTDKYLIDSHKYVFHPEHSAKHLQYIRNPADHNSSEAYKQQHPIYIEVSPVGACNHRCTFCAVDYIGYKSIFMDLERYKS SIDSMIGKECKSIMFAGEGEPLLHQNISDFVNYTKEVGAIDTSFTTNAFKLSTDFVHRSLHNVSWIKVSFNGGNSKTYSA IHRTNEKDFDVVVNNLAYAVKYRNSNKLSTAFGFQMLLLPDNVDSVHQLCKLAKEIGLDYVVIKPYSQHKFSNTQQYENI DYSEYLGLEKELTQYNDENFNVIFRVNTIKNWINQNTNRYCHCYATPSTWAYWMADGAVYSCSAYLLDKRFELGNINDRK FDEIWCSDARMKHADYVMNDLDIKECRVNCRMDQVNRYLDSIVNNKIDHINFI >Mature_372_residues TDKYLIDSHKYVFHPEHSAKHLQYIRNPADHNSSEAYKQQHPIYIEVSPVGACNHRCTFCAVDYIGYKSIFMDLERYKSS IDSMIGKECKSIMFAGEGEPLLHQNISDFVNYTKEVGAIDTSFTTNAFKLSTDFVHRSLHNVSWIKVSFNGGNSKTYSAI HRTNEKDFDVVVNNLAYAVKYRNSNKLSTAFGFQMLLLPDNVDSVHQLCKLAKEIGLDYVVIKPYSQHKFSNTQQYENID YSEYLGLEKELTQYNDENFNVIFRVNTIKNWINQNTNRYCHCYATPSTWAYWMADGAVYSCSAYLLDKRFELGNINDRKF DEIWCSDARMKHADYVMNDLDIKECRVNCRMDQVNRYLDSIVNNKIDHINFI
Specific function: Unknown
COG id: COG2896
COG function: function code H; Molybdenum cofactor biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43448; Mature: 43317
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKYLIDSHKYVFHPEHSAKHLQYIRNPADHNSSEAYKQQHPIYIEVSPVGACNHRCTF CCCCEEECCCCEEECCCCHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEE CAVDYIGYKSIFMDLERYKSSIDSMIGKECKSIMFAGEGEPLLHQNISDFVNYTKEVGAI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHHHCCC DTSFTTNAFKLSTDFVHRSLHNVSWIKVSFNGGNSKTYSAIHRTNEKDFDVVVNNLAYAV CCCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCEEEEE KYRNSNKLSTAFGFQMLLLPDNVDSVHQLCKLAKEIGLDYVVIKPYSQHKFSNTQQYENI EECCCCCCCHHHCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCC DYSEYLGLEKELTQYNDENFNVIFRVNTIKNWINQNTNRYCHCYATPSTWAYWMADGAVY CHHHHCCCHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCEE SCSAYLLDKRFELGNINDRKFDEIWCSDARMKHADYVMNDLDIKECRVNCRMDQVNRYLD EHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH SIVNNKIDHINFI HHHCCCCCCCCCC >Mature Secondary Structure TDKYLIDSHKYVFHPEHSAKHLQYIRNPADHNSSEAYKQQHPIYIEVSPVGACNHRCTF CCCEEECCCCEEECCCCHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEE CAVDYIGYKSIFMDLERYKSSIDSMIGKECKSIMFAGEGEPLLHQNISDFVNYTKEVGAI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHHHCCC DTSFTTNAFKLSTDFVHRSLHNVSWIKVSFNGGNSKTYSAIHRTNEKDFDVVVNNLAYAV CCCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCEEEEE KYRNSNKLSTAFGFQMLLLPDNVDSVHQLCKLAKEIGLDYVVIKPYSQHKFSNTQQYENI EECCCCCCCHHHCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCC DYSEYLGLEKELTQYNDENFNVIFRVNTIKNWINQNTNRYCHCYATPSTWAYWMADGAVY CHHHHCCCHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCEE SCSAYLLDKRFELGNINDRKFDEIWCSDARMKHADYVMNDLDIKECRVNCRMDQVNRYLD EHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH SIVNNKIDHINFI HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA